RNA–Protein interactions for RNA: ENST00000528869.1

CD44-AS1-201, CD44 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene CD44-AS1, Length 587 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-AS1-201ENST00000528869 RYDENQ9NUL5 291 aaKnown RBP14.55□□□□□ -0.08
CD44-AS1-201ENST00000528869 KIF3CO14782 793 aa14.51□□□□□ -0.09
CD44-AS1-201ENST00000528869 C2orf72A6NCS6 295 aa14.5□□□□□ -0.09
CD44-AS1-201ENST00000528869 GTPBP6O43824 516 aaPredicted RBP14.5□□□□□ -0.09
CD44-AS1-201ENST00000528869 DOK7Q18PE1 504 aa14.5□□□□□ -0.09
CD44-AS1-201ENST00000528869 MARVELD3Q96A59 401 aa14.48□□□□□ -0.09
CD44-AS1-201ENST00000528869 ZNF710Q8N1W2 664 aa14.46□□□□□ -0.09
CD44-AS1-201ENST00000528869 TMC2Q8TDI7 906 aa14.45□□□□□ -0.1
CD44-AS1-201ENST00000528869 RIMBP2O15034 1052 aa14.42□□□□□ -0.1
CD44-AS1-201ENST00000528869 PCDH10Q9P2E7 1040 aa14.42□□□□□ -0.1
CD44-AS1-201ENST00000528869 EMP3P54852 163 aa14.41□□□□□ -0.1
CD44-AS1-201ENST00000528869 HOXB1P14653 301 aaPredicted RBP14.4□□□□□ -0.1
CD44-AS1-201ENST00000528869 BBXQ8WY36 941 aaPredicted RBP14.39□□□□□ -0.11
CD44-AS1-201ENST00000528869 ZSWIM6Q9HCJ5 1215 aa14.38□□□□□ -0.11
CD44-AS1-201ENST00000528869 GPHNQ9NQX3 736 aaPredicted RBP14.35□□□□□ -0.11
CD44-AS1-201ENST00000528869 CDAN1Q8IWY9 1227 aa14.34□□□□□ -0.11
CD44-AS1-201ENST00000528869 GPR153Q6NV75 609 aa14.33□□□□□ -0.12
CD44-AS1-201ENST00000528869 FAM205CA6NFA0 338 aa14.32□□□□□ -0.12
CD44-AS1-201ENST00000528869 FOXK1P85037 733 aa14.31□□□□□ -0.12
CD44-AS1-201ENST00000528869 POTEB3A0JP26 581 aa14.3□□□□□ -0.12
CD44-AS1-201ENST00000528869 POTEBQ6S5H4 581 aa14.3□□□□□ -0.12
CD44-AS1-201ENST00000528869 HS3ST6Q96QI5 342 aa14.3□□□□□ -0.12
CD44-AS1-201ENST00000528869 CRISPLD2Q9H0B8 497 aa14.3□□□□□ -0.12
CD44-AS1-201ENST00000528869 DSG2Q14126 1118 aa14.29□□□□□ -0.12
CD44-AS1-201ENST00000528869 ARSIQ5FYB1 569 aa14.29□□□□□ -0.12
CD44-AS1-201ENST00000528869 NCKAP5LQ9HCH0 1330 aa14.27□□□□□ -0.12
CD44-AS1-201ENST00000528869 SLC34A2O95436 690 aa14.27□□□□□ -0.13
CD44-AS1-201ENST00000528869 PLPP6Q8IY26 295 aa14.27□□□□□ -0.13
CD44-AS1-201ENST00000528869 KHSRPQ92945 711 aaKnown RBP eCLIP14.27□□□□□ -0.13
CD44-AS1-201ENST00000528869 ERBB3P21860 1342 aa14.24□□□□□ -0.13
CD44-AS1-201ENST00000528869 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.24□□□□□ -0.13
CD44-AS1-201ENST00000528869 PCDHGA4Q9Y5G9 962 aa14.23□□□□□ -0.13
CD44-AS1-201ENST00000528869 PDE4AP27815 886 aa14.21□□□□□ -0.13
CD44-AS1-201ENST00000528869 CADPS2Q86UW7 1296 aa14.21□□□□□ -0.13
CD44-AS1-201ENST00000528869 PPP1R15BQ5SWA1 713 aa14.2□□□□□ -0.14
CD44-AS1-201ENST00000528869 SPRYD3Q8NCJ5 442 aa14.2□□□□□ -0.14
CD44-AS1-201ENST00000528869 NUDT7P0C024 238 aa14.19□□□□□ -0.14
CD44-AS1-201ENST00000528869 VARS2Q5ST30 1063 aaKnown RBP14.19□□□□□ -0.14
CD44-AS1-201ENST00000528869 PTCD2Q8WV60 388 aaKnown RBP14.17□□□□□ -0.14
CD44-AS1-201ENST00000528869 LARP6Q9BRS8 491 aaKnown RBP14.16□□□□□ -0.14
CD44-AS1-201ENST00000528869 ZNF316A6NFI3 1004 aaPredicted RBP14.14□□□□□ -0.15
CD44-AS1-201ENST00000528869 MFSD10Q14728 455 aa14.14□□□□□ -0.15
CD44-AS1-201ENST00000528869 PAXIP1Q6ZW49 1069 aaPredicted RBP14.14□□□□□ -0.15
CD44-AS1-201ENST00000528869 DDX27Q96GQ7 796 aaKnown RBP14.14□□□□□ -0.15
CD44-AS1-201ENST00000528869 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
CD44-AS1-201ENST00000528869 KRTAP3-3Q9BYR6 98 aa14.12□□□□□ -0.15
CD44-AS1-201ENST00000528869 KRTAP3-2Q9BYR7 98 aa14.12□□□□□ -0.15
CD44-AS1-201ENST00000528869 OXER1Q8TDS5 423 aa14.09□□□□□ -0.15
CD44-AS1-201ENST00000528869 UPF1Q92900 1129 aaKnown RBP eCLIP14.09□□□□□ -0.15
CD44-AS1-201ENST00000528869 LHX6Q9UPM6 363 aa14.09□□□□□ -0.15
CD44-AS1-201ENST00000528869 KDM4FA0A1W2PPD8 638 aa14.08□□□□□ -0.16
CD44-AS1-201ENST00000528869 ZNF687Q8N1G0 1237 aa14.07□□□□□ -0.16
CD44-AS1-201ENST00000528869 TBC1D12O60347 775 aa14.06□□□□□ -0.16
CD44-AS1-201ENST00000528869 EMILIN3Q9NT22 766 aa13.99□□□□□ -0.17
CD44-AS1-201ENST00000528869 SPNS2Q8IVW8 549 aa13.98□□□□□ -0.17
CD44-AS1-201ENST00000528869 PSDA5PKW4 1024 aaPredicted RBP13.97□□□□□ -0.17
CD44-AS1-201ENST00000528869 CAMK2BQ13554 666 aa13.93□□□□□ -0.18
CD44-AS1-201ENST00000528869 POTEEQ6S8J3 1075 aa13.92□□□□□ -0.18
CD44-AS1-201ENST00000528869 EVI5O60447 810 aa13.91□□□□□ -0.18
CD44-AS1-201ENST00000528869 MAP3K9P80192 1104 aa13.91□□□□□ -0.18
CD44-AS1-201ENST00000528869 PBX2P40425 430 aa13.9□□□□□ -0.18
CD44-AS1-201ENST00000528869 MMRN1Q13201 1228 aa13.89□□□□□ -0.19
CD44-AS1-201ENST00000528869 PPP4R3BQ5MIZ7 849 aa13.89□□□□□ -0.19
CD44-AS1-201ENST00000528869 AXIN2Q9Y2T1 843 aa13.88□□□□□ -0.19
CD44-AS1-201ENST00000528869 ANO8Q9HCE9 1232 aaPredicted RBP13.87□□□□□ -0.19
CD44-AS1-201ENST00000528869 LSM11P83369 360 aaKnown RBP eCLIP13.85□□□□□ -0.19
CD44-AS1-201ENST00000528869 ZNF454Q8N9F8 522 aa13.85□□□□□ -0.19
CD44-AS1-201ENST00000528869 TSHZ2Q9NRE2 1034 aa13.85□□□□□ -0.19
CD44-AS1-201ENST00000528869 DPYSL4O14531 572 aa13.84□□□□□ -0.19
CD44-AS1-201ENST00000528869 FOSBP53539 338 aa13.83□□□□□ -0.2
CD44-AS1-201ENST00000528869 ANKRD13DQ6ZTN6 518 aa13.83□□□□□ -0.2
CD44-AS1-201ENST00000528869 ARHGAP33O14559 1287 aa13.82□□□□□ -0.2
CD44-AS1-201ENST00000528869 JPH4Q96JJ6 628 aa13.82□□□□□ -0.2
CD44-AS1-201ENST00000528869 WDR70Q9NW82 654 aa13.81□□□□□ -0.2
CD44-AS1-201ENST00000528869 PSEN2P49810 448 aa13.79□□□□□ -0.2
CD44-AS1-201ENST00000528869 E2F4Q16254 413 aa13.79□□□□□ -0.2
CD44-AS1-201ENST00000528869 PLCB2Q00722 1185 aa13.76□□□□□ -0.21
CD44-AS1-201ENST00000528869 DMRTA1Q5VZB9 504 aa13.76□□□□□ -0.21
CD44-AS1-201ENST00000528869 KCNK17Q96T54 332 aa13.76□□□□□ -0.21
CD44-AS1-201ENST00000528869 BCL2L12Q9HB09 334 aa13.75□□□□□ -0.21
CD44-AS1-201ENST00000528869 ZDHHC16Q969W1 377 aa13.74□□□□□ -0.21
CD44-AS1-201ENST00000528869 PTGER2P43116 358 aa13.73□□□□□ -0.21
CD44-AS1-201ENST00000528869 PCDHGA10Q9Y5H3 936 aa13.73□□□□□ -0.21
CD44-AS1-201ENST00000528869 ADAM33Q9BZ11 813 aa13.72□□□□□ -0.21
CD44-AS1-201ENST00000528869 PDIA6Q15084 440 aa13.71□□□□□ -0.21
CD44-AS1-201ENST00000528869 ADGRD1Q6QNK2 874 aa13.71□□□□□ -0.21
CD44-AS1-201ENST00000528869 KCNH8Q96L42 1107 aa13.71□□□□□ -0.21
CD44-AS1-201ENST00000528869 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.21
CD44-AS1-201ENST00000528869 PHF14O94880 888 aa13.7□□□□□ -0.22
CD44-AS1-201ENST00000528869 ARIH1Q9Y4X5 557 aaPredicted RBP13.7□□□□□ -0.22
CD44-AS1-201ENST00000528869 PTPREP23469 700 aa13.69□□□□□ -0.22
CD44-AS1-201ENST00000528869 TK2O00142 265 aa13.68□□□□□ -0.22
CD44-AS1-201ENST00000528869 RNF166Q96A37 237 aaPredicted RBP13.68□□□□□ -0.22
CD44-AS1-201ENST00000528869 TYW1BQ6NUM6 668 aa13.67□□□□□ -0.22
CD44-AS1-201ENST00000528869 SPDYE16A6NNV3 312 aaPredicted RBP13.66□□□□□ -0.22
CD44-AS1-201ENST00000528869 DDX12PQ92771 950 aa13.65□□□□□ -0.22
CD44-AS1-201ENST00000528869 FBXW7Q969H0 707 aa13.65□□□□□ -0.22
CD44-AS1-201ENST00000528869 EPAS1Q99814 870 aa13.63□□□□□ -0.23
CD44-AS1-201ENST00000528869 HRO43593 1189 aa13.62□□□□□ -0.23
CD44-AS1-201ENST00000528869 VPS9D1Q9Y2B5 631 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms