RNA–Protein interactions for RNA: ENST00000525953.5

C11orf49-208, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 4

Gene C11orf49, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-208ENST00000525953 CLIP1P30622 1438 aa12.48□□□□□ -0.41
C11orf49-208ENST00000525953 YEATS2Q9ULM3 1422 aa12.48□□□□□ -0.41
C11orf49-208ENST00000525953 CDC42BPAQ5VT25 1732 aa12.48□□□□□ -0.41
C11orf49-208ENST00000525953 CCDC18Q5T9S5 1454 aa12.47□□□□□ -0.41
C11orf49-208ENST00000525953 ATP1B4Q9UN42 357 aaPredicted RBP12.47□□□□□ -0.41
C11orf49-208ENST00000525953 MADDQ8WXG6 1647 aa12.47□□□□□ -0.41
C11orf49-208ENST00000525953 ZFYVE16Q7Z3T8 1539 aa12.47□□□□□ -0.41
C11orf49-208ENST00000525953 KDM5CP41229 1560 aa12.46□□□□□ -0.42
C11orf49-208ENST00000525953 SCAPERQ9BY12 1400 aa12.45□□□□□ -0.42
C11orf49-208ENST00000525953 ARHGAP5Q13017 1502 aa12.44□□□□□ -0.42
C11orf49-208ENST00000525953 PTPRMP28827 1452 aa12.44□□□□□ -0.42
C11orf49-208ENST00000525953 ABCC1P33527 1531 aa12.43□□□□□ -0.42
C11orf49-208ENST00000525953 ARHGEF12Q9NZN5 1544 aa12.43□□□□□ -0.42
C11orf49-208ENST00000525953 MAGI2Q86UL8 1455 aa12.43□□□□□ -0.42
C11orf49-208ENST00000525953 RIMS1Q86UR5 1692 aaKnown RBP12.42□□□□□ -0.42
C11orf49-208ENST00000525953 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
C11orf49-208ENST00000525953 CEP162Q5TB80 1403 aa12.41□□□□□ -0.42
C11orf49-208ENST00000525953 CDK11AQ9UQ88 783 aaPredicted RBP12.41□□□□□ -0.42
C11orf49-208ENST00000525953 ABCA6Q8N139 1617 aa12.4□□□□□ -0.42
C11orf49-208ENST00000525953 SAMD9LQ8IVG5 1584 aa12.4□□□□□ -0.42
C11orf49-208ENST00000525953 DIP2CQ9Y2E4 1556 aa12.4□□□□□ -0.42
C11orf49-208ENST00000525953 ZNF518AQ6AHZ1 1483 aa12.4□□□□□ -0.43
C11orf49-208ENST00000525953 EFCAB2Q5VUJ9 269 aa12.39□□□□□ -0.43
C11orf49-208ENST00000525953 FER1L4A9Z1Z3 1794 aa12.38□□□□□ -0.43
C11orf49-208ENST00000525953 TRAPPC8Q9Y2L5 1435 aa12.38□□□□□ -0.43
C11orf49-208ENST00000525953 KIDINS220Q9ULH0 1771 aa12.37□□□□□ -0.43
C11orf49-208ENST00000525953 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
C11orf49-208ENST00000525953 C9orf84Q5VXU9 1444 aa12.37□□□□□ -0.43
C11orf49-208ENST00000525953 REREQ9P2R6 1566 aa12.36□□□□□ -0.43
C11orf49-208ENST00000525953 ATP10AO60312 1499 aa12.36□□□□□ -0.43
C11orf49-208ENST00000525953 TIAM1Q13009 1591 aa12.35□□□□□ -0.43
C11orf49-208ENST00000525953 AFAP1Q8N556 730 aa12.35□□□□□ -0.43
C11orf49-208ENST00000525953 SYCP2Q9BX26 1530 aa12.35□□□□□ -0.43
C11orf49-208ENST00000525953 LMTK3Q96Q04 1460 aa12.34□□□□□ -0.43
C11orf49-208ENST00000525953 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
C11orf49-208ENST00000525953 ARID4BQ4LE39 1312 aaPredicted RBP12.34□□□□□ -0.43
C11orf49-208ENST00000525953 EHBP1L1Q8N3D4 1523 aa12.32□□□□□ -0.44
C11orf49-208ENST00000525953 INO80Q9ULG1 1556 aaPredicted RBP12.31□□□□□ -0.44
C11orf49-208ENST00000525953 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
C11orf49-208ENST00000525953 AGLP35573 1532 aa12.3□□□□□ -0.44
C11orf49-208ENST00000525953 MTUS2Q5JR59 1369 aa12.29□□□□□ -0.44
C11orf49-208ENST00000525953 PLXNC1O60486 1568 aa12.27□□□□□ -0.44
C11orf49-208ENST00000525953 MLECQ14165 292 aa12.27□□□□□ -0.45
C11orf49-208ENST00000525953 VPS8Q8N3P4 1428 aa12.27□□□□□ -0.45
C11orf49-208ENST00000525953 KIAA1107Q9UPP5 1409 aa12.27□□□□□ -0.45
C11orf49-208ENST00000525953 MBD5Q9P267 1494 aa12.27□□□□□ -0.45
C11orf49-208ENST00000525953 ATP7AQ04656 1500 aa12.27□□□□□ -0.45
C11orf49-208ENST00000525953 C3P01024 1663 aa12.26□□□□□ -0.45
C11orf49-208ENST00000525953 SUPT6HQ7KZ85 1726 aaKnown RBP12.26□□□□□ -0.45
C11orf49-208ENST00000525953 CCNB3Q8WWL7 1395 aa12.26□□□□□ -0.45
C11orf49-208ENST00000525953 ZNF644Q9H582 1327 aaPredicted RBP12.25□□□□□ -0.45
C11orf49-208ENST00000525953 NCOA2Q15596 1464 aa12.25□□□□□ -0.45
C11orf49-208ENST00000525953 PREX1Q8TCU6 1659 aa12.25□□□□□ -0.45
C11orf49-208ENST00000525953 HNRNPMP52272 730 aaKnown RBP eCLIP12.24□□□□□ -0.45
C11orf49-208ENST00000525953 PLEKHH2Q8IVE3 1493 aa12.24□□□□□ -0.45
C11orf49-208ENST00000525953 ADGBQ8N7X0 1667 aa12.24□□□□□ -0.45
C11orf49-208ENST00000525953 ZNF777Q9ULD5 760 aaPredicted RBP12.24□□□□□ -0.45
C11orf49-208ENST00000525953 CFDP1Q9UEE9 299 aaPredicted RBP12.23□□□□□ -0.45
C11orf49-208ENST00000525953 LRRC9Q6ZRR7 1453 aa12.21□□□□□ -0.45
C11orf49-208ENST00000525953 CEBPAP49715 358 aaPredicted RBP12.21□□□□□ -0.45
C11orf49-208ENST00000525953 MROH2AA6NES4 1674 aa12.21□□□□□ -0.45
C11orf49-208ENST00000525953 CAMSAP2Q08AD1 1489 aa12.21□□□□□ -0.46
C11orf49-208ENST00000525953 MAP3K1Q13233 1512 aa12.2□□□□□ -0.46
C11orf49-208ENST00000525953 STRCQ7RTU9 1775 aa12.2□□□□□ -0.46
C11orf49-208ENST00000525953 SPAG9O60271 1321 aaKnown RBP12.19□□□□□ -0.46
C11orf49-208ENST00000525953 HSPA2P54652 639 aa12.19□□□□□ -0.46
C11orf49-208ENST00000525953 PLPPR3Q6T4P5 718 aa12.19□□□□□ -0.46
C11orf49-208ENST00000525953 A2MP01023 1474 aa12.19□□□□□ -0.46
C11orf49-208ENST00000525953 MYT1LQ9UL68 1186 aa12.18□□□□□ -0.46
C11orf49-208ENST00000525953 CLTCQ00610 1675 aaKnown RBP12.18□□□□□ -0.46
C11orf49-208ENST00000525953 SETD1BQ9UPS6 1966 aaKnown RBP12.18□□□□□ -0.46
C11orf49-208ENST00000525953 ARHGEF5Q12774 1597 aa12.18□□□□□ -0.46
C11orf49-208ENST00000525953 KANK4Q5T7N3 995 aaPredicted RBP12.17□□□□□ -0.46
C11orf49-208ENST00000525953 ILDR1Q86SU0 546 aaPredicted RBP12.17□□□□□ -0.46
C11orf49-208ENST00000525953 CCDC141Q6ZP82 1450 aa12.16□□□□□ -0.46
C11orf49-208ENST00000525953 RTEL1-TNFRSF6BF6WH68 1400 aa12.15□□□□□ -0.46
C11orf49-208ENST00000525953 CNTLNQ9NXG0 1405 aa12.14□□□□□ -0.47
C11orf49-208ENST00000525953 MAST1Q9Y2H9 1570 aa12.13□□□□□ -0.47
C11orf49-208ENST00000525953 UHRF1BP1Q6BDS2 1440 aa12.12□□□□□ -0.47
C11orf49-208ENST00000525953 ZNF142P52746 1687 aaPredicted RBP12.12□□□□□ -0.47
C11orf49-208ENST00000525953 MYO3AQ8NEV4 1616 aa12.11□□□□□ -0.47
C11orf49-208ENST00000525953 CROCC2H7BZ55 1655 aa12.11□□□□□ -0.47
C11orf49-208ENST00000525953 NPATQ14207 1427 aa12.11□□□□□ -0.47
C11orf49-208ENST00000525953 MYOM3Q5VTT5 1437 aa12.11□□□□□ -0.47
C11orf49-208ENST00000525953 ZMYM3Q14202 1370 aa12.1□□□□□ -0.47
C11orf49-208ENST00000525953 DHX29Q7Z478 1369 aaKnown RBP12.1□□□□□ -0.47
C11orf49-208ENST00000525953 PTPRKQ15262 1439 aa12.1□□□□□ -0.47
C11orf49-208ENST00000525953 MROH1Q8NDA8 1641 aa12.09□□□□□ -0.47
C11orf49-208ENST00000525953 MIA2Q96PC5 1412 aa12.09□□□□□ -0.47
C11orf49-208ENST00000525953 RNF17Q9BXT8 1623 aaKnown RBP12.08□□□□□ -0.48
C11orf49-208ENST00000525953 PTPN23Q9H3S7 1636 aa12.07□□□□□ -0.48
C11orf49-208ENST00000525953 KDM5DQ9BY66 1539 aa12.06□□□□□ -0.48
C11orf49-208ENST00000525953 NCOA1Q15788 1441 aa12.06□□□□□ -0.48
C11orf49-208ENST00000525953 FAM135AQ9P2D6 1515 aa12.06□□□□□ -0.48
C11orf49-208ENST00000525953 CEP170BQ9Y4F5 1589 aaPredicted RBP12.05□□□□□ -0.48
C11orf49-208ENST00000525953 CAMSAP1Q5T5Y3 1602 aa12.05□□□□□ -0.48
C11orf49-208ENST00000525953 EIF2AK4Q9P2K8 1649 aaKnown RBP12.05□□□□□ -0.48
C11orf49-208ENST00000525953 GGT6Q6P531 493 aa12.05□□□□□ -0.48
C11orf49-208ENST00000525953 TCOF1Q13428 1488 aaKnown RBP12.04□□□□□ -0.48
C11orf49-208ENST00000525953 RSPH4AQ5TD94 716 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms