RNA–Protein interactions for RNA: ENST00000525887.5

TRIM29-207, Transcript of tripartite motif containing 29, humanhuman

TSL 2

Gene TRIM29, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-207ENST00000525887 LOC105371045A0A1W2PR82 267 aa28.64■■■□□ 2.18
TRIM29-207ENST00000525887 POGZQ7Z3K3 1410 aa28.61■■■□□ 2.17
TRIM29-207ENST00000525887 EFCAB2Q5VUJ9 269 aa28.59■■■□□ 2.17
TRIM29-207ENST00000525887 CDC42BPBQ9Y5S2 1711 aa28.59■■■□□ 2.17
TRIM29-207ENST00000525887 SCAPERQ9BY12 1400 aa28.59■■■□□ 2.17
TRIM29-207ENST00000525887 CDC42BPAQ5VT25 1732 aa28.56■■■□□ 2.16
TRIM29-207ENST00000525887 EHBP1L1Q8N3D4 1523 aa28.56■■■□□ 2.16
TRIM29-207ENST00000525887 VPS8Q8N3P4 1428 aa28.54■■■□□ 2.16
TRIM29-207ENST00000525887 MTUS2Q5JR59 1369 aa28.54■■■□□ 2.16
TRIM29-207ENST00000525887 ZFYVE16Q7Z3T8 1539 aa28.53■■■□□ 2.16
TRIM29-207ENST00000525887 MAGI2Q86UL8 1455 aa28.53■■■□□ 2.16
TRIM29-207ENST00000525887 ABCC1P33527 1531 aa28.52■■■□□ 2.16
TRIM29-207ENST00000525887 ZNF518AQ6AHZ1 1483 aa28.51■■■□□ 2.15
TRIM29-207ENST00000525887 KDM5CP41229 1560 aa28.48■■■□□ 2.15
TRIM29-207ENST00000525887 YEATS2Q9ULM3 1422 aa28.47■■■□□ 2.15
TRIM29-207ENST00000525887 GPATCH8Q9UKJ3 1502 aaKnown RBP28.47■■■□□ 2.15
TRIM29-207ENST00000525887 TIAM1Q13009 1591 aa28.46■■■□□ 2.15
TRIM29-207ENST00000525887 ITSN2Q9NZM3 1697 aa28.45■■■□□ 2.15
TRIM29-207ENST00000525887 SAMD9LQ8IVG5 1584 aa28.42■■■□□ 2.14
TRIM29-207ENST00000525887 HECW2Q9P2P5 1572 aa28.42■■■□□ 2.14
TRIM29-207ENST00000525887 BCORL1Q5H9F3 1711 aa28.41■■■□□ 2.14
TRIM29-207ENST00000525887 CCNB3Q8WWL7 1395 aa28.41■■■□□ 2.14
TRIM29-207ENST00000525887 ADAMTSL3P82987 1691 aa28.4■■■□□ 2.14
TRIM29-207ENST00000525887 ARHGEF12Q9NZN5 1544 aa28.39■■■□□ 2.14
TRIM29-207ENST00000525887 SUPT6HQ7KZ85 1726 aaKnown RBP28.37■■■□□ 2.13
TRIM29-207ENST00000525887 SIGLEC1Q9BZZ2 1709 aa28.37■■■□□ 2.13
TRIM29-207ENST00000525887 SYCP2Q9BX26 1530 aa28.37■■■□□ 2.13
TRIM29-207ENST00000525887 TRAPPC8Q9Y2L5 1435 aa28.35■■■□□ 2.13
TRIM29-207ENST00000525887 ARID4BQ4LE39 1312 aaPredicted RBP28.35■■■□□ 2.13
TRIM29-207ENST00000525887 C9orf84Q5VXU9 1444 aa28.35■■■□□ 2.13
TRIM29-207ENST00000525887 PLEKHH2Q8IVE3 1493 aa28.34■■■□□ 2.13
TRIM29-207ENST00000525887 MAP3K1Q13233 1512 aa28.33■■■□□ 2.13
TRIM29-207ENST00000525887 AFAP1Q8N556 730 aa28.33■■■□□ 2.13
TRIM29-207ENST00000525887 ATP10AO60312 1499 aa28.33■■■□□ 2.13
TRIM29-207ENST00000525887 MLH3Q9UHC1 1453 aa28.33■■■□□ 2.13
TRIM29-207ENST00000525887 DIP2CQ9Y2E4 1556 aa28.33■■■□□ 2.12
TRIM29-207ENST00000525887 MADDQ8WXG6 1647 aa28.32■■■□□ 2.12
TRIM29-207ENST00000525887 NCOA2Q15596 1464 aa28.32■■■□□ 2.12
TRIM29-207ENST00000525887 CFDP1Q9UEE9 299 aaPredicted RBP28.31■■■□□ 2.12
TRIM29-207ENST00000525887 LRRC9Q6ZRR7 1453 aa28.31■■■□□ 2.12
TRIM29-207ENST00000525887 ABCA6Q8N139 1617 aa28.31■■■□□ 2.12
TRIM29-207ENST00000525887 ZNF777Q9ULD5 760 aaPredicted RBP28.3■■■□□ 2.12
TRIM29-207ENST00000525887 KIAA1107Q9UPP5 1409 aa28.29■■■□□ 2.12
TRIM29-207ENST00000525887 REREQ9P2R6 1566 aa28.28■■■□□ 2.12
TRIM29-207ENST00000525887 PTPRMP28827 1452 aa28.26■■■□□ 2.11
TRIM29-207ENST00000525887 KIDINS220Q9ULH0 1771 aa28.24■■■□□ 2.11
TRIM29-207ENST00000525887 MYT1LQ9UL68 1186 aa28.22■■■□□ 2.11
TRIM29-207ENST00000525887 RIMS1Q86UR5 1692 aaKnown RBP28.22■■■□□ 2.11
TRIM29-207ENST00000525887 INO80Q9ULG1 1556 aaPredicted RBP28.21■■■□□ 2.11
TRIM29-207ENST00000525887 ATP7AQ04656 1500 aa28.18■■■□□ 2.1
TRIM29-207ENST00000525887 FER1L4A9Z1Z3 1794 aa28.18■■■□□ 2.1
TRIM29-207ENST00000525887 CAMSAP2Q08AD1 1489 aa28.17■■■□□ 2.1
TRIM29-207ENST00000525887 HNRNPMP52272 730 aaKnown RBP eCLIP28.17■■■□□ 2.1
TRIM29-207ENST00000525887 AGLP35573 1532 aa28.15■■■□□ 2.1
TRIM29-207ENST00000525887 SPAG9O60271 1321 aaKnown RBP28.15■■■□□ 2.1
TRIM29-207ENST00000525887 ZNF644Q9H582 1327 aaPredicted RBP28.15■■■□□ 2.1
TRIM29-207ENST00000525887 MBD5Q9P267 1494 aa28.15■■■□□ 2.1
TRIM29-207ENST00000525887 KANK4Q5T7N3 995 aaPredicted RBP28.13■■■□□ 2.09
TRIM29-207ENST00000525887 MLECQ14165 292 aa28.11■■■□□ 2.09
TRIM29-207ENST00000525887 CCDC141Q6ZP82 1450 aa28.09■■■□□ 2.09
TRIM29-207ENST00000525887 APLP2Q06481 763 aa28.09■■■□□ 2.09
TRIM29-207ENST00000525887 PLXNC1O60486 1568 aa28.08■■■□□ 2.09
TRIM29-207ENST00000525887 MYOM3Q5VTT5 1437 aa28.07■■■□□ 2.08
TRIM29-207ENST00000525887 ARHGEF5Q12774 1597 aa28.06■■■□□ 2.08
TRIM29-207ENST00000525887 ADGBQ8N7X0 1667 aa28.03■■■□□ 2.08
TRIM29-207ENST00000525887 MIA2Q96PC5 1412 aa28.03■■■□□ 2.08
TRIM29-207ENST00000525887 A2MP01023 1474 aa28.02■■■□□ 2.08
TRIM29-207ENST00000525887 RTEL1-TNFRSF6BF6WH68 1400 aa28.02■■■□□ 2.08
TRIM29-207ENST00000525887 RSPH4AQ5TD94 716 aa27.96■■■□□ 2.07
TRIM29-207ENST00000525887 LMTK3Q96Q04 1460 aa27.95■■■□□ 2.06
TRIM29-207ENST00000525887 MAST1Q9Y2H9 1570 aa27.92■■■□□ 2.06
TRIM29-207ENST00000525887 CNTLNQ9NXG0 1405 aa27.92■■■□□ 2.06
TRIM29-207ENST00000525887 PLPPR3Q6T4P5 718 aa27.91■■■□□ 2.06
TRIM29-207ENST00000525887 PTPN23Q9H3S7 1636 aa27.9■■■□□ 2.06
TRIM29-207ENST00000525887 C3P01024 1663 aa27.89■■■□□ 2.06
TRIM29-207ENST00000525887 FGD6Q6ZV73 1430 aa27.88■■■□□ 2.05
TRIM29-207ENST00000525887 MROH2AA6NES4 1674 aa27.87■■■□□ 2.05
TRIM29-207ENST00000525887 ESF1Q9H501 851 aaKnown RBP27.87■■■□□ 2.05
TRIM29-207ENST00000525887 PREX1Q8TCU6 1659 aa27.86■■■□□ 2.05
TRIM29-207ENST00000525887 DHX29Q7Z478 1369 aaKnown RBP27.86■■■□□ 2.05
TRIM29-207ENST00000525887 CROCC2H7BZ55 1655 aa27.84■■■□□ 2.05
TRIM29-207ENST00000525887 TCOF1Q13428 1488 aaKnown RBP27.84■■■□□ 2.05
TRIM29-207ENST00000525887 TSPY4P0CV99 314 aa27.84■■■□□ 2.05
TRIM29-207ENST00000525887 TSPY10P0CW01 314 aa27.84■■■□□ 2.05
TRIM29-207ENST00000525887 SHANK2Q9UPX8 1470 aa27.83■■■□□ 2.04
TRIM29-207ENST00000525887 CLTCQ00610 1675 aaKnown RBP27.81■■■□□ 2.04
TRIM29-207ENST00000525887 CEBPAP49715 358 aaPredicted RBP27.81■■■□□ 2.04
TRIM29-207ENST00000525887 DNMT1P26358 1616 aaKnown RBP27.8■■■□□ 2.04
TRIM29-207ENST00000525887 FAM135AQ9P2D6 1515 aa27.77■■■□□ 2.04
TRIM29-207ENST00000525887 GGT6Q6P531 493 aa27.76■■■□□ 2.03
TRIM29-207ENST00000525887 ABCC5O15440 1437 aa27.75■■■□□ 2.03
TRIM29-207ENST00000525887 DAPK1P53355 1430 aa27.75■■■□□ 2.03
TRIM29-207ENST00000525887 UHRF1BP1Q6BDS2 1440 aa27.75■■■□□ 2.03
TRIM29-207ENST00000525887 EIF2AK4Q9P2K8 1649 aaKnown RBP27.74■■■□□ 2.03
TRIM29-207ENST00000525887 KDM5DQ9BY66 1539 aa27.73■■■□□ 2.03
TRIM29-207ENST00000525887 NPATQ14207 1427 aa27.73■■■□□ 2.03
TRIM29-207ENST00000525887 RNF17Q9BXT8 1623 aaKnown RBP27.72■■■□□ 2.03
TRIM29-207ENST00000525887 PPP6R1Q9UPN7 881 aa27.72■■■□□ 2.03
TRIM29-207ENST00000525887 ZMYM3Q14202 1370 aa27.72■■■□□ 2.03
TRIM29-207ENST00000525887 KIF3BO15066 747 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms