RNA–Protein interactions for RNA: ENST00000524157.2

SPIDR-226, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 267 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-226ENST00000524157 PDE4DQ08499 809 aa9.63□□□□□ -0.87
SPIDR-226ENST00000524157 TRIM66O15016 1216 aa9.62□□□□□ -0.87
SPIDR-226ENST00000524157 RBM26Q5T8P6 1007 aaKnown RBP9.62□□□□□ -0.87
SPIDR-226ENST00000524157 ZRANB1Q9UGI0 708 aa9.61□□□□□ -0.87
SPIDR-226ENST00000524157 CD44P16070 742 aaKnown RBP9.6□□□□□ -0.87
SPIDR-226ENST00000524157 ARID3AQ99856 593 aa9.58□□□□□ -0.88
SPIDR-226ENST00000524157 MLLT3P42568 568 aaPredicted RBP9.57□□□□□ -0.88
SPIDR-226ENST00000524157 GOLGA2Q08379 1002 aa9.56□□□□□ -0.88
SPIDR-226ENST00000524157 FLIIQ13045 1269 aa9.56□□□□□ -0.88
SPIDR-226ENST00000524157 NPM2Q86SE8 214 aaKnown RBP9.56□□□□□ -0.88
SPIDR-226ENST00000524157 HRCP23327 699 aa9.55□□□□□ -0.88
SPIDR-226ENST00000524157 MKRN3Q13064 507 aaKnown RBP9.55□□□□□ -0.88
SPIDR-226ENST00000524157 CLCN6P51797 869 aa9.54□□□□□ -0.88
SPIDR-226ENST00000524157 DDRGK1Q96HY6 314 aa9.54□□□□□ -0.88
SPIDR-226ENST00000524157 ZNF316A6NFI3 1004 aaPredicted RBP9.53□□□□□ -0.88
SPIDR-226ENST00000524157 C1orf115Q9H7X2 142 aa9.53□□□□□ -0.88
SPIDR-226ENST00000524157 SPDYE16A6NNV3 312 aaPredicted RBP9.52□□□□□ -0.89
SPIDR-226ENST00000524157 MS4A4AQ96JQ5 239 aa9.52□□□□□ -0.89
SPIDR-226ENST00000524157 TIE1P35590 1138 aa9.51□□□□□ -0.89
SPIDR-226ENST00000524157 TMEM106CQ9BVX2 250 aa9.51□□□□□ -0.89
SPIDR-226ENST00000524157 FAM117AQ9C073 453 aa9.51□□□□□ -0.89
SPIDR-226ENST00000524157 C19orf67A6NJJ6 358 aa9.5□□□□□ -0.89
SPIDR-226ENST00000524157 APBB1O00213 710 aa9.5□□□□□ -0.89
SPIDR-226ENST00000524157 PHF12Q96QT6 1004 aa9.5□□□□□ -0.89
SPIDR-226ENST00000524157 PPP1R15BQ5SWA1 713 aa9.49□□□□□ -0.89
SPIDR-226ENST00000524157 ILDR1Q86SU0 546 aaPredicted RBP9.49□□□□□ -0.89
SPIDR-226ENST00000524157 ZBTB7CA1YPR0 619 aa9.48□□□□□ -0.89
SPIDR-226ENST00000524157 MINK1Q8N4C8 1332 aaPredicted RBP9.48□□□□□ -0.89
SPIDR-226ENST00000524157 PDIA4P13667 645 aaKnown RBP9.47□□□□□ -0.89
SPIDR-226ENST00000524157 PDIA6Q15084 440 aa9.47□□□□□ -0.89
SPIDR-226ENST00000524157 ARID3CA6NKF2 412 aa9.46□□□□□ -0.9
SPIDR-226ENST00000524157 PLEKHG3A1L390 1219 aa9.45□□□□□ -0.9
SPIDR-226ENST00000524157 GPR37O15354 613 aa9.45□□□□□ -0.9
SPIDR-226ENST00000524157 MS4A3Q96HJ5 214 aa9.45□□□□□ -0.9
SPIDR-226ENST00000524157 GOPCQ9HD26 462 aa9.45□□□□□ -0.9
SPIDR-226ENST00000524157 DPYSL4O14531 572 aa9.44□□□□□ -0.9
SPIDR-226ENST00000524157 MAP2K5Q13163 448 aa9.44□□□□□ -0.9
SPIDR-226ENST00000524157 AMHR2Q16671 573 aa9.44□□□□□ -0.9
SPIDR-226ENST00000524157 GPHNQ9NQX3 736 aaPredicted RBP9.44□□□□□ -0.9
SPIDR-226ENST00000524157 CCDC9Q9Y3X0 531 aaKnown RBP9.44□□□□□ -0.9
SPIDR-226ENST00000524157 CCDC102AQ96A19 550 aa9.42□□□□□ -0.9
SPIDR-226ENST00000524157 A6NJR5 290 aa9.41□□□□□ -0.9
SPIDR-226ENST00000524157 TTLL13PA6NNM8 815 aa9.4□□□□□ -0.9
SPIDR-226ENST00000524157 IRF6O14896 467 aa9.39□□□□□ -0.91
SPIDR-226ENST00000524157 PARP9Q8IXQ6 854 aa9.39□□□□□ -0.91
SPIDR-226ENST00000524157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.39□□□□□ -0.916e-10■■□□□ 12.6
SPIDR-226ENST00000524157 ONECUT3O60422 494 aaPredicted RBP9.38□□□□□ -0.91
SPIDR-226ENST00000524157 EMILIN3Q9NT22 766 aa9.38□□□□□ -0.91
SPIDR-226ENST00000524157 TRAK2O60296 914 aa9.37□□□□□ -0.91
SPIDR-226ENST00000524157 CCDC82Q8N4S0 544 aa9.37□□□□□ -0.91
SPIDR-226ENST00000524157 NUTM2FA1L443 756 aa9.36□□□□□ -0.91
SPIDR-226ENST00000524157 TRPC6Q9Y210 931 aa9.36□□□□□ -0.91
SPIDR-226ENST00000524157 GNPATO15228 680 aa9.35□□□□□ -0.91
SPIDR-226ENST00000524157 PCMTD1Q96MG8 357 aaPredicted RBP9.35□□□□□ -0.91
SPIDR-226ENST00000524157 BMP2KQ9NSY1 1161 aaPredicted RBP9.35□□□□□ -0.91
SPIDR-226ENST00000524157 TTLL12Q14166 644 aaPredicted RBP9.34□□□□□ -0.91
SPIDR-226ENST00000524157 DSG2Q14126 1118 aa9.33□□□□□ -0.92
SPIDR-226ENST00000524157 HIC1Q14526 733 aa9.33□□□□□ -0.92
SPIDR-226ENST00000524157 IER5LQ5T953 404 aa9.33□□□□□ -0.92
SPIDR-226ENST00000524157 CLUAP1Q96AJ1 413 aa9.33□□□□□ -0.92
SPIDR-226ENST00000524157 TRIM35Q9UPQ4 493 aa9.32□□□□□ -0.92
SPIDR-226ENST00000524157 FCHSD2O94868 740 aa9.31□□□□□ -0.92
SPIDR-226ENST00000524157 GRXCR2A6NFK2 248 aa9.3□□□□□ -0.92
SPIDR-226ENST00000524157 FOXK1P85037 733 aa9.3□□□□□ -0.92
SPIDR-226ENST00000524157 TMC2Q8TDI7 906 aa9.3□□□□□ -0.92
SPIDR-226ENST00000524157 MCM6Q14566 821 aa9.29□□□□□ -0.92
SPIDR-226ENST00000524157 MICALL2Q8IY33 904 aa9.28□□□□□ -0.92
SPIDR-226ENST00000524157 NECTIN2Q92692 538 aa9.28□□□□□ -0.92
SPIDR-226ENST00000524157 TMEM121BQ9BXQ6 578 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-226ENST00000524157 GIGYF2Q6Y7W6 1299 aaKnown RBP9.27□□□□□ -0.93
SPIDR-226ENST00000524157 OCEL1Q9H607 264 aa9.27□□□□□ -0.93
SPIDR-226ENST00000524157 GALR2O43603 387 aaPredicted RBP9.26□□□□□ -0.93
SPIDR-226ENST00000524157 MAP3K9P80192 1104 aa9.26□□□□□ -0.93
SPIDR-226ENST00000524157 SH3D19Q5HYK7 790 aa9.26□□□□□ -0.93
SPIDR-226ENST00000524157 PROSER2Q86WR7 435 aaPredicted RBP9.26□□□□□ -0.93
SPIDR-226ENST00000524157 KCTD17Q8N5Z5 321 aa9.26□□□□□ -0.93
SPIDR-226ENST00000524157 TRAIPQ9BWF2 469 aa9.26□□□□□ -0.93
SPIDR-226ENST00000524157 OSBPP22059 807 aa9.25□□□□□ -0.93
SPIDR-226ENST00000524157 IRX5P78411 483 aaPredicted RBP9.25□□□□□ -0.93
SPIDR-226ENST00000524157 ASTLQ6HA08 431 aaPredicted RBP9.25□□□□□ -0.93
SPIDR-226ENST00000524157 PDCD7Q8N8D1 485 aaKnown RBP9.25□□□□□ -0.93
SPIDR-226ENST00000524157 SERPINA10Q9UK55 444 aa9.25□□□□□ -0.93
SPIDR-226ENST00000524157 G3V3G9 751 aa9.24□□□□□ -0.93
SPIDR-226ENST00000524157 CCDC97Q96F63 343 aaPredicted RBP9.24□□□□□ -0.93
SPIDR-226ENST00000524157 RAD21O60216 631 aa9.23□□□□□ -0.93
SPIDR-226ENST00000524157 MS4A1P11836 297 aa9.23□□□□□ -0.93
SPIDR-226ENST00000524157 PLPP6Q8IY26 295 aa9.23□□□□□ -0.93
SPIDR-226ENST00000524157 L3MBTL3Q96JM7 780 aaPredicted RBP9.23□□□□□ -0.93
SPIDR-226ENST00000524157 BOLA1Q9Y3E2 137 aa9.23□□□□□ -0.93
SPIDR-226ENST00000524157 HAX1O00165 279 aa9.22□□□□□ -0.93
SPIDR-226ENST00000524157 ATMINO43313 823 aaPredicted RBP9.22□□□□□ -0.93
SPIDR-226ENST00000524157 FECHP22830 423 aa9.22□□□□□ -0.93
SPIDR-226ENST00000524157 KIF3CO14782 793 aa9.21□□□□□ -0.94
SPIDR-226ENST00000524157 PTGER2P43116 358 aa9.21□□□□□ -0.94
SPIDR-226ENST00000524157 ATN1P54259 1190 aaPredicted RBP9.21□□□□□ -0.94
SPIDR-226ENST00000524157 DPY19L2Q6NUT2 758 aa9.2□□□□□ -0.94
SPIDR-226ENST00000524157 ZNF777Q9ULD5 760 aaPredicted RBP9.2□□□□□ -0.94
SPIDR-226ENST00000524157 CLCN1P35523 988 aa9.18□□□□□ -0.94
SPIDR-226ENST00000524157 PTGDRQ13258 359 aa9.18□□□□□ -0.94
SPIDR-226ENST00000524157 SKIV2LQ15477 1246 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms