RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 ACIN1Q9UKV3 1341 aaKnown RBP32.83■■■□□ 2.85
NKX6-3-202ENST00000524115 NEO1Q92859 1461 aa32.83■■■□□ 2.85
NKX6-3-202ENST00000524115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.82■■■□□ 2.84
NKX6-3-202ENST00000524115 RAPGEF3O95398 923 aa32.78■■■□□ 2.84
NKX6-3-202ENST00000524115 SETD5Q9C0A6 1442 aa32.77■■■□□ 2.84
NKX6-3-202ENST00000524115 TROQ12816 1431 aaPredicted RBP32.73■■■□□ 2.83
NKX6-3-202ENST00000524115 SCAF1Q9H7N4 1312 aaKnown RBP32.73■■■□□ 2.83
NKX6-3-202ENST00000524115 RAB3GAP2Q9H2M9 1393 aa32.72■■■□□ 2.83
NKX6-3-202ENST00000524115 TTC37Q6PGP7 1564 aa32.72■■■□□ 2.83
NKX6-3-202ENST00000524115 FANCAO15360 1455 aa32.71■■■□□ 2.83
NKX6-3-202ENST00000524115 AKNAQ7Z591 1439 aa32.7■■■□□ 2.82
NKX6-3-202ENST00000524115 PLCH2O75038 1416 aa32.69■■■□□ 2.82
NKX6-3-202ENST00000524115 CCDC18Q5T9S5 1454 aa32.68■■■□□ 2.82
NKX6-3-202ENST00000524115 ITGAEP38570 1179 aa32.63■■■□□ 2.81
NKX6-3-202ENST00000524115 LRRIQ1Q96JM4 1722 aa32.63■■■□□ 2.81
NKX6-3-202ENST00000524115 DENND4BO75064 1496 aaPredicted RBP32.62■■■□□ 2.81
NKX6-3-202ENST00000524115 ADGRL1O94910 1474 aa32.61■■■□□ 2.81
NKX6-3-202ENST00000524115 EFCAB2Q5VUJ9 269 aa32.61■■■□□ 2.81
NKX6-3-202ENST00000524115 FAM50AQ14320 339 aaKnown RBP32.59■■■□□ 2.81
NKX6-3-202ENST00000524115 KIF14Q15058 1648 aa32.59■■■□□ 2.81
NKX6-3-202ENST00000524115 NEUROD1Q13562 356 aa32.57■■■□□ 2.8
NKX6-3-202ENST00000524115 MTUS2Q5JR59 1369 aa32.56■■■□□ 2.8
NKX6-3-202ENST00000524115 CFAP74Q9C0B2 1584 aa32.55■■■□□ 2.8
NKX6-3-202ENST00000524115 TIMELESSQ9UNS1 1208 aa32.55■■■□□ 2.8
NKX6-3-202ENST00000524115 FRMPD1Q5SYB0 1578 aa32.54■■■□□ 2.8
NKX6-3-202ENST00000524115 FGD6Q6ZV73 1430 aa32.54■■■□□ 2.8
NKX6-3-202ENST00000524115 SCAPERQ9BY12 1400 aa32.53■■■□□ 2.8
NKX6-3-202ENST00000524115 EHBP1L1Q8N3D4 1523 aa32.52■■■□□ 2.8
NKX6-3-202ENST00000524115 MIER1Q8N108 512 aa32.48■■■□□ 2.79
NKX6-3-202ENST00000524115 SUPT6HQ7KZ85 1726 aaKnown RBP32.47■■■□□ 2.79
NKX6-3-202ENST00000524115 ARHGAP5Q13017 1502 aa32.45■■■□□ 2.79
NKX6-3-202ENST00000524115 MYO5CQ9NQX4 1742 aa32.44■■■□□ 2.78
NKX6-3-202ENST00000524115 POGZQ7Z3K3 1410 aa32.43■■■□□ 2.78
NKX6-3-202ENST00000524115 RICTORQ6R327 1708 aa32.42■■■□□ 2.78
NKX6-3-202ENST00000524115 MYOM3Q5VTT5 1437 aa32.41■■■□□ 2.78
NKX6-3-202ENST00000524115 NCOA2Q15596 1464 aa32.4■■■□□ 2.78
NKX6-3-202ENST00000524115 ARID4BQ4LE39 1312 aaPredicted RBP32.38■■■□□ 2.77
NKX6-3-202ENST00000524115 ZMYM4Q5VZL5 1548 aa32.37■■■□□ 2.77
NKX6-3-202ENST00000524115 MAGI2Q86UL8 1455 aa32.37■■■□□ 2.77
NKX6-3-202ENST00000524115 AFAP1Q8N556 730 aa32.37■■■□□ 2.77
NKX6-3-202ENST00000524115 YEATS2Q9ULM3 1422 aa32.36■■■□□ 2.77
NKX6-3-202ENST00000524115 ARHGEF40Q8TER5 1519 aa32.34■■■□□ 2.77
NKX6-3-202ENST00000524115 HFM1A2PYH4 1435 aa32.33■■■□□ 2.77
NKX6-3-202ENST00000524115 PELP1Q8IZL8 1130 aaKnown RBP32.33■■■□□ 2.77
NKX6-3-202ENST00000524115 ZFYVE16Q7Z3T8 1539 aa32.31■■■□□ 2.76
NKX6-3-202ENST00000524115 GPATCH8Q9UKJ3 1502 aaKnown RBP32.31■■■□□ 2.76
NKX6-3-202ENST00000524115 ZNF777Q9ULD5 760 aaPredicted RBP32.3■■■□□ 2.76
NKX6-3-202ENST00000524115 ZNF518AQ6AHZ1 1483 aa32.29■■■□□ 2.76
NKX6-3-202ENST00000524115 PREX2Q70Z35 1606 aa32.29■■■□□ 2.76
NKX6-3-202ENST00000524115 CDC42BPBQ9Y5S2 1711 aa32.29■■■□□ 2.76
NKX6-3-202ENST00000524115 CFDP1Q9UEE9 299 aaPredicted RBP32.27■■■□□ 2.76
NKX6-3-202ENST00000524115 ARHGEF12Q9NZN5 1544 aa32.25■■■□□ 2.75
NKX6-3-202ENST00000524115 GTF3C3Q9Y5Q9 886 aa32.25■■■□□ 2.75
NKX6-3-202ENST00000524115 TCOF1Q13428 1488 aaKnown RBP32.25■■■□□ 2.75
NKX6-3-202ENST00000524115 MYT1LQ9UL68 1186 aa32.24■■■□□ 2.75
NKX6-3-202ENST00000524115 TRAPPC8Q9Y2L5 1435 aa32.24■■■□□ 2.75
NKX6-3-202ENST00000524115 PTPN23Q9H3S7 1636 aa32.23■■■□□ 2.75
NKX6-3-202ENST00000524115 ABCC1P33527 1531 aa32.21■■■□□ 2.75
NKX6-3-202ENST00000524115 ATP10AO60312 1499 aa32.21■■■□□ 2.75
NKX6-3-202ENST00000524115 CDC42BPAQ5VT25 1732 aa32.2■■■□□ 2.75
NKX6-3-202ENST00000524115 MIA2Q96PC5 1412 aa32.2■■■□□ 2.75
NKX6-3-202ENST00000524115 KDM5CP41229 1560 aa32.19■■■□□ 2.74
NKX6-3-202ENST00000524115 HNRNPMP52272 730 aaKnown RBP eCLIP32.18■■■□□ 2.74
NKX6-3-202ENST00000524115 ADAMTSL3P82987 1691 aa32.17■■■□□ 2.74
NKX6-3-202ENST00000524115 MLH3Q9UHC1 1453 aa32.15■■■□□ 2.74
NKX6-3-202ENST00000524115 C9orf84Q5VXU9 1444 aa32.15■■■□□ 2.74
NKX6-3-202ENST00000524115 MLECQ14165 292 aa32.15■■■□□ 2.74
NKX6-3-202ENST00000524115 BCORL1Q5H9F3 1711 aa32.14■■■□□ 2.74
NKX6-3-202ENST00000524115 NAIPQ13075 1403 aa32.13■■■□□ 2.73
NKX6-3-202ENST00000524115 YTHDC1Q96MU7 727 aaKnown RBP32.13■■■□□ 2.73
NKX6-3-202ENST00000524115 PTPRMP28827 1452 aa32.13■■■□□ 2.73
NKX6-3-202ENST00000524115 SAMD9LQ8IVG5 1584 aa32.12■■■□□ 2.73
NKX6-3-202ENST00000524115 PTPRKQ15262 1439 aa32.12■■■□□ 2.73
NKX6-3-202ENST00000524115 KIAA1107Q9UPP5 1409 aa32.12■■■□□ 2.73
NKX6-3-202ENST00000524115 ZNF644Q9H582 1327 aaPredicted RBP32.1■■■□□ 2.73
NKX6-3-202ENST00000524115 PLEKHH2Q8IVE3 1493 aa32.09■■■□□ 2.73
NKX6-3-202ENST00000524115 HECW2Q9P2P5 1572 aa32.09■■■□□ 2.73
NKX6-3-202ENST00000524115 SIGLEC1Q9BZZ2 1709 aa32.08■■■□□ 2.73
NKX6-3-202ENST00000524115 SIN3AQ96ST3 1273 aa32.08■■■□□ 2.73
NKX6-3-202ENST00000524115 SYCP2Q9BX26 1530 aa32.08■■■□□ 2.73
NKX6-3-202ENST00000524115 ITSN2Q9NZM3 1697 aa32.07■■■□□ 2.72
NKX6-3-202ENST00000524115 MADDQ8WXG6 1647 aa32.05■■■□□ 2.72
NKX6-3-202ENST00000524115 PPP1R15AO75807 674 aaPredicted RBP32.05■■■□□ 2.72
NKX6-3-202ENST00000524115 SPAG9O60271 1321 aaKnown RBP32.05■■■□□ 2.72
NKX6-3-202ENST00000524115 GCC2Q8IWJ2 1684 aa32.04■■■□□ 2.72
NKX6-3-202ENST00000524115 DIP2CQ9Y2E4 1556 aa32.02■■■□□ 2.72
NKX6-3-202ENST00000524115 TONSLQ96HA7 1378 aa32.01■■■□□ 2.71
NKX6-3-202ENST00000524115 ABCA6Q8N139 1617 aa31.97■■■□□ 2.71
NKX6-3-202ENST00000524115 MBD5Q9P267 1494 aa31.96■■■□□ 2.71
NKX6-3-202ENST00000524115 PLPPR3Q6T4P5 718 aa31.95■■■□□ 2.71
NKX6-3-202ENST00000524115 REREQ9P2R6 1566 aa31.95■■■□□ 2.71
NKX6-3-202ENST00000524115 KIDINS220Q9ULH0 1771 aa31.94■■■□□ 2.7
NKX6-3-202ENST00000524115 RIMS1Q86UR5 1692 aaKnown RBP31.91■■■□□ 2.7
NKX6-3-202ENST00000524115 ROCK1Q13464 1354 aa31.9■■■□□ 2.7
NKX6-3-202ENST00000524115 AGLP35573 1532 aa31.9■■■□□ 2.7
NKX6-3-202ENST00000524115 ATP7AQ04656 1500 aa31.87■■■□□ 2.69
NKX6-3-202ENST00000524115 RSPH4AQ5TD94 716 aa31.87■■■□□ 2.69
NKX6-3-202ENST00000524115 CAMSAP2Q08AD1 1489 aa31.86■■■□□ 2.69
NKX6-3-202ENST00000524115 CEBPAP49715 358 aaPredicted RBP31.83■■■□□ 2.69
NKX6-3-202ENST00000524115 INO80Q9ULG1 1556 aaPredicted RBP31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms