RNA–Protein interactions for RNA: ENST00000522130.1

MSR1-213, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 3

Gene MSR1, Length 489 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-213ENST00000522130 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
MSR1-213ENST00000522130 CADPS2Q86UW7 1296 aa13.02□□□□□ -0.33
MSR1-213ENST00000522130 C2orf72A6NCS6 295 aa13.01□□□□□ -0.33
MSR1-213ENST00000522130 KIF3CO14782 793 aa13□□□□□ -0.33
MSR1-213ENST00000522130 TSHZ2Q9NRE2 1034 aa13□□□□□ -0.33
MSR1-213ENST00000522130 GPHNQ9NQX3 736 aaPredicted RBP12.99□□□□□ -0.33
MSR1-213ENST00000522130 PDE4AP27815 886 aa12.98□□□□□ -0.33
MSR1-213ENST00000522130 CRISPLD2Q9H0B8 497 aa12.98□□□□□ -0.33
MSR1-213ENST00000522130 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
MSR1-213ENST00000522130 HAP1P54257 671 aaPredicted RBP12.94□□□□□ -0.34
MSR1-213ENST00000522130 LARP6Q9BRS8 491 aaKnown RBP12.94□□□□□ -0.34
MSR1-213ENST00000522130 FOXK1P85037 733 aa12.92□□□□□ -0.34
MSR1-213ENST00000522130 SNPHO15079 494 aa12.91□□□□□ -0.34
MSR1-213ENST00000522130 DSG2Q14126 1118 aa12.91□□□□□ -0.34
MSR1-213ENST00000522130 PLPP6Q8IY26 295 aa12.88□□□□□ -0.35
MSR1-213ENST00000522130 DDX27Q96GQ7 796 aaKnown RBP12.88□□□□□ -0.35
MSR1-213ENST00000522130 MFSD10Q14728 455 aa12.87□□□□□ -0.35
MSR1-213ENST00000522130 PPP1R15BQ5SWA1 713 aa12.87□□□□□ -0.35
MSR1-213ENST00000522130 HOXB3P14651 431 aaPredicted RBP12.85□□□□□ -0.35
MSR1-213ENST00000522130 DOK7Q18PE1 504 aa12.85□□□□□ -0.35
MSR1-213ENST00000522130 WDR70Q9NW82 654 aa12.82□□□□□ -0.36
MSR1-213ENST00000522130 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
MSR1-213ENST00000522130 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
MSR1-213ENST00000522130 RIMBP2O15034 1052 aa12.79□□□□□ -0.36
MSR1-213ENST00000522130 SLC34A2O95436 690 aa12.78□□□□□ -0.36
MSR1-213ENST00000522130 ST18O60284 1047 aa12.75□□□□□ -0.37
MSR1-213ENST00000522130 ZSWIM6Q9HCJ5 1215 aa12.75□□□□□ -0.37
MSR1-213ENST00000522130 VSIG10Q8N0Z9 540 aa12.74□□□□□ -0.37
MSR1-213ENST00000522130 PTCD2Q8WV60 388 aaKnown RBP12.73□□□□□ -0.37
MSR1-213ENST00000522130 CAMK2BQ13554 666 aa12.72□□□□□ -0.37
MSR1-213ENST00000522130 E2F4Q16254 413 aa12.72□□□□□ -0.37
MSR1-213ENST00000522130 KDM2AQ9Y2K7 1162 aa12.72□□□□□ -0.37
MSR1-213ENST00000522130 PCDHGA4Q9Y5G9 962 aa12.71□□□□□ -0.37
MSR1-213ENST00000522130 ARSIQ5FYB1 569 aa12.7□□□□□ -0.38
MSR1-213ENST00000522130 LCE2DQ5TA82 110 aaPredicted RBP12.7□□□□□ -0.38
MSR1-213ENST00000522130 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
MSR1-213ENST00000522130 OXER1Q8TDS5 423 aa12.7□□□□□ -0.38
MSR1-213ENST00000522130 UPF1Q92900 1129 aaKnown RBP eCLIP12.7□□□□□ -0.38
MSR1-213ENST00000522130 EMILIN3Q9NT22 766 aa12.7□□□□□ -0.38
MSR1-213ENST00000522130 TBC1D12O60347 775 aa12.69□□□□□ -0.38
MSR1-213ENST00000522130 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
MSR1-213ENST00000522130 KHSRPQ92945 711 aaKnown RBP eCLIP12.65□□□□□ -0.38
MSR1-213ENST00000522130 MAP3K9P80192 1104 aa12.64□□□□□ -0.39
MSR1-213ENST00000522130 MARVELD3Q96A59 401 aa12.63□□□□□ -0.39
MSR1-213ENST00000522130 NUDT7P0C024 238 aa12.62□□□□□ -0.39
MSR1-213ENST00000522130 SLC24A1O60721 1099 aa12.61□□□□□ -0.39
MSR1-213ENST00000522130 DPYSL4O14531 572 aa12.6□□□□□ -0.39
MSR1-213ENST00000522130 EMP3P54852 163 aa12.6□□□□□ -0.39
MSR1-213ENST00000522130 P3H3Q8IVL6 736 aa12.6□□□□□ -0.39
MSR1-213ENST00000522130 KCNV2Q8TDN2 545 aa12.6□□□□□ -0.39
MSR1-213ENST00000522130 ARIH1Q9Y4X5 557 aaPredicted RBP12.59□□□□□ -0.39
MSR1-213ENST00000522130 KDM4FA0A1W2PPD8 638 aa12.58□□□□□ -0.4
MSR1-213ENST00000522130 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
MSR1-213ENST00000522130 EVI5O60447 810 aa12.56□□□□□ -0.4
MSR1-213ENST00000522130 ARHGEF1Q92888 912 aaKnown RBP12.55□□□□□ -0.4
MSR1-213ENST00000522130 ERBB3P21860 1342 aa12.54□□□□□ -0.4
MSR1-213ENST00000522130 POTEGQ6S5H5 508 aa12.53□□□□□ -0.4
MSR1-213ENST00000522130 ANO8Q9HCE9 1232 aaPredicted RBP12.53□□□□□ -0.4
MSR1-213ENST00000522130 LHX6Q9UPM6 363 aa12.53□□□□□ -0.4
MSR1-213ENST00000522130 FAM205CA6NFA0 338 aa12.52□□□□□ -0.41
MSR1-213ENST00000522130 POTEMA6NI47 508 aa12.52□□□□□ -0.41
MSR1-213ENST00000522130 SPDYE16A6NNV3 312 aaPredicted RBP12.51□□□□□ -0.41
MSR1-213ENST00000522130 PDIA6Q15084 440 aa12.51□□□□□ -0.41
MSR1-213ENST00000522130 VARS2Q5ST30 1063 aaKnown RBP12.49□□□□□ -0.41
MSR1-213ENST00000522130 HS3ST6Q96QI5 342 aa12.47□□□□□ -0.41
MSR1-213ENST00000522130 PSDA5PKW4 1024 aaPredicted RBP12.46□□□□□ -0.41
MSR1-213ENST00000522130 POTEB3A0JP26 581 aa12.44□□□□□ -0.42
MSR1-213ENST00000522130 POTEBQ6S5H4 581 aa12.44□□□□□ -0.42
MSR1-213ENST00000522130 PTGER2P43116 358 aa12.43□□□□□ -0.42
MSR1-213ENST00000522130 ZNF454Q8N9F8 522 aa12.42□□□□□ -0.42
MSR1-213ENST00000522130 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
MSR1-213ENST00000522130 FOSBP53539 338 aa12.41□□□□□ -0.42
MSR1-213ENST00000522130 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
MSR1-213ENST00000522130 DDX12PQ92771 950 aa12.4□□□□□ -0.42
MSR1-213ENST00000522130 PHF14O94880 888 aa12.38□□□□□ -0.43
MSR1-213ENST00000522130 ZNF687Q8N1G0 1237 aa12.38□□□□□ -0.43
MSR1-213ENST00000522130 PCDHGA10Q9Y5H3 936 aa12.38□□□□□ -0.43
MSR1-213ENST00000522130 SEMA3EO15041 775 aa12.36□□□□□ -0.43
MSR1-213ENST00000522130 GRXCR2A6NFK2 248 aa12.35□□□□□ -0.43
MSR1-213ENST00000522130 CDAN1Q8IWY9 1227 aa12.35□□□□□ -0.43
MSR1-213ENST00000522130 ZDHHC16Q969W1 377 aa12.35□□□□□ -0.43
MSR1-213ENST00000522130 EPAS1Q99814 870 aa12.35□□□□□ -0.43
MSR1-213ENST00000522130 TYW1BQ6NUM6 668 aa12.34□□□□□ -0.43
MSR1-213ENST00000522130 FBXW7Q969H0 707 aa12.33□□□□□ -0.44
MSR1-213ENST00000522130 MLLT3P42568 568 aaPredicted RBP12.32□□□□□ -0.44
MSR1-213ENST00000522130 NBR1Q14596 966 aa12.32□□□□□ -0.44
MSR1-213ENST00000522130 PCDH10Q9P2E7 1040 aa12.31□□□□□ -0.44
MSR1-213ENST00000522130 PBX2P40425 430 aa12.3□□□□□ -0.44
MSR1-213ENST00000522130 ADAM33Q9BZ11 813 aa12.3□□□□□ -0.44
MSR1-213ENST00000522130 BCL2L12Q9HB09 334 aa12.3□□□□□ -0.44
MSR1-213ENST00000522130 TESPA1A2RU30 521 aaPredicted RBP12.29□□□□□ -0.44
MSR1-213ENST00000522130 OSBPP22059 807 aa12.28□□□□□ -0.44
MSR1-213ENST00000522130 RBM33Q96EV2 1170 aaKnown RBP12.28□□□□□ -0.44
MSR1-213ENST00000522130 ARHGAP33O14559 1287 aa12.27□□□□□ -0.45
MSR1-213ENST00000522130 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.45
MSR1-213ENST00000522130 KCNH8Q96L42 1107 aa12.27□□□□□ -0.45
MSR1-213ENST00000522130 AXIN2Q9Y2T1 843 aa12.27□□□□□ -0.45
MSR1-213ENST00000522130 EN1Q05925 392 aaPredicted RBP12.26□□□□□ -0.45
MSR1-213ENST00000522130 KCNK17Q96T54 332 aa12.26□□□□□ -0.45
MSR1-213ENST00000522130 PTPREP23469 700 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms