RNA–Protein interactions for RNA: ENST00000519712.1

NSMCE2-207, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-207ENST00000519712 RAPGEF3O95398 923 aa18.41■□□□□ 0.54
NSMCE2-207ENST00000519712 POTEDQ86YR6 584 aa18.4■□□□□ 0.54
NSMCE2-207ENST00000519712 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.54
NSMCE2-207ENST00000519712 CDK11AQ9UQ88 783 aaPredicted RBP18.39■□□□□ 0.53
NSMCE2-207ENST00000519712 CLIP1P30622 1438 aa18.39■□□□□ 0.53
NSMCE2-207ENST00000519712 ADAMTSL3P82987 1691 aa18.37■□□□□ 0.53
NSMCE2-207ENST00000519712 POGZQ7Z3K3 1410 aa18.35■□□□□ 0.53
NSMCE2-207ENST00000519712 ATP1B4Q9UN42 357 aaPredicted RBP18.35■□□□□ 0.53
NSMCE2-207ENST00000519712 MAGI2Q86UL8 1455 aa18.34■□□□□ 0.53
NSMCE2-207ENST00000519712 BCORL1Q5H9F3 1711 aa18.33■□□□□ 0.52
NSMCE2-207ENST00000519712 ZFYVE16Q7Z3T8 1539 aa18.32■□□□□ 0.52
NSMCE2-207ENST00000519712 SCAPERQ9BY12 1400 aa18.32■□□□□ 0.52
NSMCE2-207ENST00000519712 PREX2Q70Z35 1606 aa18.31■□□□□ 0.52
NSMCE2-207ENST00000519712 CDC42BPBQ9Y5S2 1711 aa18.31■□□□□ 0.52
NSMCE2-207ENST00000519712 KDM5CP41229 1560 aa18.29■□□□□ 0.52
NSMCE2-207ENST00000519712 ARHGAP5Q13017 1502 aa18.28■□□□□ 0.52
NSMCE2-207ENST00000519712 EFCAB2Q5VUJ9 269 aa18.28■□□□□ 0.52
NSMCE2-207ENST00000519712 YEATS2Q9ULM3 1422 aa18.28■□□□□ 0.52
NSMCE2-207ENST00000519712 SIGLEC1Q9BZZ2 1709 aa18.28■□□□□ 0.52
NSMCE2-207ENST00000519712 CDC42BPAQ5VT25 1732 aa18.26■□□□□ 0.51
NSMCE2-207ENST00000519712 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
NSMCE2-207ENST00000519712 HECW2Q9P2P5 1572 aa18.25■□□□□ 0.51
NSMCE2-207ENST00000519712 MADDQ8WXG6 1647 aa18.25■□□□□ 0.51
NSMCE2-207ENST00000519712 PTPRMP28827 1452 aa18.25■□□□□ 0.51
NSMCE2-207ENST00000519712 ABCC1P33527 1531 aa18.24■□□□□ 0.51
NSMCE2-207ENST00000519712 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
NSMCE2-207ENST00000519712 ITSN2Q9NZM3 1697 aa18.22■□□□□ 0.51
NSMCE2-207ENST00000519712 ARHGEF12Q9NZN5 1544 aa18.2■□□□□ 0.5
NSMCE2-207ENST00000519712 C9orf84Q5VXU9 1444 aa18.2■□□□□ 0.5
NSMCE2-207ENST00000519712 ATP10AO60312 1499 aa18.2■□□□□ 0.5
NSMCE2-207ENST00000519712 REREQ9P2R6 1566 aa18.19■□□□□ 0.5
NSMCE2-207ENST00000519712 MLH3Q9UHC1 1453 aa18.18■□□□□ 0.5
NSMCE2-207ENST00000519712 GPATCH8Q9UKJ3 1502 aaKnown RBP18.18■□□□□ 0.5
NSMCE2-207ENST00000519712 DIP2CQ9Y2E4 1556 aa18.17■□□□□ 0.5
NSMCE2-207ENST00000519712 RIMS1Q86UR5 1692 aaKnown RBP18.17■□□□□ 0.5
NSMCE2-207ENST00000519712 ARID4BQ4LE39 1312 aaPredicted RBP18.17■□□□□ 0.5
NSMCE2-207ENST00000519712 EHBP1L1Q8N3D4 1523 aa18.16■□□□□ 0.5
NSMCE2-207ENST00000519712 SAMD9LQ8IVG5 1584 aa18.16■□□□□ 0.5
NSMCE2-207ENST00000519712 TRAPPC8Q9Y2L5 1435 aa18.15■□□□□ 0.5
NSMCE2-207ENST00000519712 ABCA6Q8N139 1617 aa18.15■□□□□ 0.5
NSMCE2-207ENST00000519712 AFAP1Q8N556 730 aa18.14■□□□□ 0.49
NSMCE2-207ENST00000519712 FER1L4A9Z1Z3 1794 aa18.13■□□□□ 0.49
NSMCE2-207ENST00000519712 KIDINS220Q9ULH0 1771 aa18.12■□□□□ 0.49
NSMCE2-207ENST00000519712 MTUS2Q5JR59 1369 aa18.12■□□□□ 0.49
NSMCE2-207ENST00000519712 KIAA1107Q9UPP5 1409 aa18.11■□□□□ 0.49
NSMCE2-207ENST00000519712 SYCP2Q9BX26 1530 aa18.11■□□□□ 0.49
NSMCE2-207ENST00000519712 TIAM1Q13009 1591 aa18.11■□□□□ 0.49
NSMCE2-207ENST00000519712 AGLP35573 1532 aa18.1■□□□□ 0.49
NSMCE2-207ENST00000519712 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
NSMCE2-207ENST00000519712 CCNB3Q8WWL7 1395 aa18.08■□□□□ 0.49
NSMCE2-207ENST00000519712 LMTK3Q96Q04 1460 aa18.07■□□□□ 0.48
NSMCE2-207ENST00000519712 VPS8Q8N3P4 1428 aa18.06■□□□□ 0.48
NSMCE2-207ENST00000519712 INO80Q9ULG1 1556 aaPredicted RBP18.05■□□□□ 0.48
NSMCE2-207ENST00000519712 SUPT6HQ7KZ85 1726 aaKnown RBP18.03■□□□□ 0.48
NSMCE2-207ENST00000519712 CFDP1Q9UEE9 299 aaPredicted RBP18.03■□□□□ 0.48
NSMCE2-207ENST00000519712 ATP7AQ04656 1500 aa18.03■□□□□ 0.48
NSMCE2-207ENST00000519712 LOC105371045A0A1W2PR82 267 aa18.02■□□□□ 0.48
NSMCE2-207ENST00000519712 PLXNC1O60486 1568 aa18.01■□□□□ 0.47
NSMCE2-207ENST00000519712 MAP3K1Q13233 1512 aa18.01■□□□□ 0.47
NSMCE2-207ENST00000519712 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
NSMCE2-207ENST00000519712 MBD5Q9P267 1494 aa18.01■□□□□ 0.47
NSMCE2-207ENST00000519712 MLECQ14165 292 aa18■□□□□ 0.47
NSMCE2-207ENST00000519712 ZNF777Q9ULD5 760 aaPredicted RBP18■□□□□ 0.47
NSMCE2-207ENST00000519712 SPAG9O60271 1321 aaKnown RBP17.98■□□□□ 0.47
NSMCE2-207ENST00000519712 HNRNPMP52272 730 aaKnown RBP eCLIP17.97■□□□□ 0.47
NSMCE2-207ENST00000519712 PREX1Q8TCU6 1659 aa17.96■□□□□ 0.47
NSMCE2-207ENST00000519712 LRRC9Q6ZRR7 1453 aa17.96■□□□□ 0.47
NSMCE2-207ENST00000519712 MYT1LQ9UL68 1186 aa17.96■□□□□ 0.47
NSMCE2-207ENST00000519712 C3P01024 1663 aa17.94■□□□□ 0.46
NSMCE2-207ENST00000519712 ADGBQ8N7X0 1667 aa17.94■□□□□ 0.46
NSMCE2-207ENST00000519712 RTEL1-TNFRSF6BF6WH68 1400 aa17.94■□□□□ 0.46
NSMCE2-207ENST00000519712 ZNF644Q9H582 1327 aaPredicted RBP17.94■□□□□ 0.46
NSMCE2-207ENST00000519712 CAMSAP2Q08AD1 1489 aa17.94■□□□□ 0.46
NSMCE2-207ENST00000519712 SETD1BQ9UPS6 1966 aaKnown RBP17.93■□□□□ 0.46
NSMCE2-207ENST00000519712 CNTLNQ9NXG0 1405 aa17.93■□□□□ 0.46
NSMCE2-207ENST00000519712 A2MP01023 1474 aa17.93■□□□□ 0.46
NSMCE2-207ENST00000519712 MROH2AA6NES4 1674 aa17.93■□□□□ 0.46
NSMCE2-207ENST00000519712 CCDC141Q6ZP82 1450 aa17.91■□□□□ 0.46
NSMCE2-207ENST00000519712 ARHGEF5Q12774 1597 aa17.91■□□□□ 0.46
NSMCE2-207ENST00000519712 CEBPAP49715 358 aaPredicted RBP17.88■□□□□ 0.45
NSMCE2-207ENST00000519712 RSPH4AQ5TD94 716 aa17.86■□□□□ 0.45
NSMCE2-207ENST00000519712 HSPA2P54652 639 aa17.85■□□□□ 0.45
NSMCE2-207ENST00000519712 UHRF1BP1Q6BDS2 1440 aa17.85■□□□□ 0.45
NSMCE2-207ENST00000519712 NPATQ14207 1427 aa17.84■□□□□ 0.45
NSMCE2-207ENST00000519712 MIA2Q96PC5 1412 aa17.84■□□□□ 0.45
NSMCE2-207ENST00000519712 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
NSMCE2-207ENST00000519712 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.45
NSMCE2-207ENST00000519712 MYOM3Q5VTT5 1437 aa17.83■□□□□ 0.45
NSMCE2-207ENST00000519712 DHX29Q7Z478 1369 aaKnown RBP17.83■□□□□ 0.45
NSMCE2-207ENST00000519712 FAM135AQ9P2D6 1515 aa17.82■□□□□ 0.44
NSMCE2-207ENST00000519712 CLTCQ00610 1675 aaKnown RBP17.82■□□□□ 0.44
NSMCE2-207ENST00000519712 ESF1Q9H501 851 aaKnown RBP17.81■□□□□ 0.44
NSMCE2-207ENST00000519712 ILDR1Q86SU0 546 aaPredicted RBP17.8■□□□□ 0.44
NSMCE2-207ENST00000519712 STRCQ7RTU9 1775 aa17.8■□□□□ 0.44
NSMCE2-207ENST00000519712 ZMYM3Q14202 1370 aa17.79■□□□□ 0.44
NSMCE2-207ENST00000519712 ZNF142P52746 1687 aaPredicted RBP17.77■□□□□ 0.44
NSMCE2-207ENST00000519712 PTPRKQ15262 1439 aa17.76■□□□□ 0.43
NSMCE2-207ENST00000519712 MYO3AQ8NEV4 1616 aa17.75■□□□□ 0.43
NSMCE2-207ENST00000519712 KDM5DQ9BY66 1539 aa17.74■□□□□ 0.43
NSMCE2-207ENST00000519712 RNF17Q9BXT8 1623 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms