RNA–Protein interactions for RNA: ENST00000517553.1

TRAPPC2-205, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 475 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-205ENST00000517553 ARSIQ5FYB1 569 aa7.28□□□□□ -1.24
TRAPPC2-205ENST00000517553 GPR153Q6NV75 609 aa7.28□□□□□ -1.24
TRAPPC2-205ENST00000517553 KHSRPQ92945 711 aaKnown RBP eCLIP7.28□□□□□ -1.24
TRAPPC2-205ENST00000517553 MICALL2Q8IY33 904 aa7.27□□□□□ -1.25
TRAPPC2-205ENST00000517553 TRIM41Q8WV44 630 aa7.27□□□□□ -1.25
TRAPPC2-205ENST00000517553 LSM11P83369 360 aaKnown RBP eCLIP7.24□□□□□ -1.25
TRAPPC2-205ENST00000517553 PKD2Q13563 968 aa7.24□□□□□ -1.25
TRAPPC2-205ENST00000517553 ZSWIM6Q9HCJ5 1215 aa7.23□□□□□ -1.25
TRAPPC2-205ENST00000517553 ECM2O94769 699 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC2-205ENST00000517553 MS4A4AQ96JQ5 239 aa7.21□□□□□ -1.26
TRAPPC2-205ENST00000517553 PHF8Q9UPP1 1060 aa7.21□□□□□ -1.26
TRAPPC2-205ENST00000517553 ZNF316A6NFI3 1004 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC2-205ENST00000517553 AXIN2Q9Y2T1 843 aa7.19□□□□□ -1.26
TRAPPC2-205ENST00000517553 SOX12O15370 315 aa7.18□□□□□ -1.26
TRAPPC2-205ENST00000517553 RGS20O76081 388 aa7.18□□□□□ -1.26
TRAPPC2-205ENST00000517553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC2-205ENST00000517553 ZFP91Q96JP5 570 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC2-205ENST00000517553 Q6ZNB5 142 aa7.16□□□□□ -1.26
TRAPPC2-205ENST00000517553 NUDT7P0C024 238 aa7.15□□□□□ -1.26
TRAPPC2-205ENST00000517553 DCAF8L2P0C7V8 631 aa7.14□□□□□ -1.27
TRAPPC2-205ENST00000517553 TAOK2Q9UL54 1235 aa7.14□□□□□ -1.27
TRAPPC2-205ENST00000517553 POTEEQ6S8J3 1075 aa7.13□□□□□ -1.27
TRAPPC2-205ENST00000517553 RIOK3O14730 519 aaKnown RBP7.12□□□□□ -1.27
TRAPPC2-205ENST00000517553 RNF25Q96BH1 459 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC2-205ENST00000517553 LHX6Q9UPM6 363 aa7.12□□□□□ -1.27
TRAPPC2-205ENST00000517553 SLC24A1O60721 1099 aa7.11□□□□□ -1.27
TRAPPC2-205ENST00000517553 C2orf72A6NCS6 295 aa7.09□□□□□ -1.27
TRAPPC2-205ENST00000517553 RGL2O15211 777 aa7.09□□□□□ -1.27
TRAPPC2-205ENST00000517553 LCE2BO14633 110 aa7.08□□□□□ -1.28
TRAPPC2-205ENST00000517553 VGFO15240 615 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC2-205ENST00000517553 NLRP6P59044 892 aa7.07□□□□□ -1.28
TRAPPC2-205ENST00000517553 PBX2P40425 430 aa7.05□□□□□ -1.28
TRAPPC2-205ENST00000517553 FBXO22Q8NEZ5 403 aa7.05□□□□□ -1.28
TRAPPC2-205ENST00000517553 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC2-205ENST00000517553 PCDHGA4Q9Y5G9 962 aa7.05□□□□□ -1.28
TRAPPC2-205ENST00000517553 A0A0G2JS52 829 aa7.04□□□□□ -1.28
TRAPPC2-205ENST00000517553 ADGRD1Q6QNK2 874 aa7.04□□□□□ -1.28
TRAPPC2-205ENST00000517553 BBXQ8WY36 941 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC2-205ENST00000517553 BCL11BQ9C0K0 894 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC2-205ENST00000517553 STK24Q9Y6E0 443 aa7.04□□□□□ -1.28
TRAPPC2-205ENST00000517553 KIF3CO14782 793 aa7.03□□□□□ -1.28
TRAPPC2-205ENST00000517553 PLCB2Q00722 1185 aa7.03□□□□□ -1.28
TRAPPC2-205ENST00000517553 ARHGAP33O14559 1287 aa7.02□□□□□ -1.29
TRAPPC2-205ENST00000517553 PSEN2P49810 448 aa7.02□□□□□ -1.29
TRAPPC2-205ENST00000517553 HS6ST3Q8IZP7 471 aa7.02□□□□□ -1.29
TRAPPC2-205ENST00000517553 MFRPQ9BY79 579 aa7.02□□□□□ -1.29
TRAPPC2-205ENST00000517553 IFFO2Q5TF58 517 aa7.01□□□□□ -1.29
TRAPPC2-205ENST00000517553 KCTD12Q96CX2 325 aaKnown RBP7.01□□□□□ -1.29
TRAPPC2-205ENST00000517553 DMRTA1Q5VZB9 504 aa7□□□□□ -1.29
TRAPPC2-205ENST00000517553 DNAJC5Q9H3Z4 198 aa7□□□□□ -1.29
TRAPPC2-205ENST00000517553 TMC2Q8TDI7 906 aa6.99□□□□□ -1.29
TRAPPC2-205ENST00000517553 CHGAP10645 457 aaKnown RBP6.98□□□□□ -1.29
TRAPPC2-205ENST00000517553 STAC3Q96MF2 364 aa6.98□□□□□ -1.29
TRAPPC2-205ENST00000517553 LOC100996750A0A140TA64 210 aa6.97□□□□□ -1.29
TRAPPC2-205ENST00000517553 STK25O00506 426 aa6.97□□□□□ -1.29
TRAPPC2-205ENST00000517553 SLC34A2O95436 690 aa6.97□□□□□ -1.29
TRAPPC2-205ENST00000517553 PTPN5P54829 565 aa6.97□□□□□ -1.29
TRAPPC2-205ENST00000517553 KRTAP4-6Q9BYQ5 205 aa6.97□□□□□ -1.29
TRAPPC2-205ENST00000517553 HRO43593 1189 aa6.95□□□□□ -1.3
TRAPPC2-205ENST00000517553 TRAF7Q6Q0C0 670 aa6.94□□□□□ -1.3
TRAPPC2-205ENST00000517553 RYDENQ9NUL5 291 aaKnown RBP6.94□□□□□ -1.3
TRAPPC2-205ENST00000517553 PPP1R37O75864 691 aa6.93□□□□□ -1.3
TRAPPC2-205ENST00000517553 TK2O00142 265 aa6.92□□□□□ -1.3
TRAPPC2-205ENST00000517553 SPRYD3Q8NCJ5 442 aa6.92□□□□□ -1.3
TRAPPC2-205ENST00000517553 ZNF775Q96BV0 537 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC2-205ENST00000517553 PSDA5PKW4 1024 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC2-205ENST00000517553 KDM4FA0A1W2PPD8 638 aa6.9□□□□□ -1.3
TRAPPC2-205ENST00000517553 KCNK17Q96T54 332 aa6.9□□□□□ -1.3
TRAPPC2-205ENST00000517553 HAP1P54257 671 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC2-205ENST00000517553 PAXIP1Q6ZW49 1069 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC2-205ENST00000517553 PPP4R3BQ5MIZ7 849 aa6.88□□□□□ -1.31
TRAPPC2-205ENST00000517553 PTCD2Q8WV60 388 aaKnown RBP6.88□□□□□ -1.31
TRAPPC2-205ENST00000517553 CFAP44Q96MT7 982 aa6.88□□□□□ -1.31
TRAPPC2-205ENST00000517553 PLPP6Q8IY26 295 aa6.87□□□□□ -1.31
TRAPPC2-205ENST00000517553 VPS9D1Q9Y2B5 631 aa6.86□□□□□ -1.31
TRAPPC2-205ENST00000517553 ZNF787Q6DD87 383 aa6.85□□□□□ -1.31
TRAPPC2-205ENST00000517553 VSIG10Q8N0Z9 540 aa6.85□□□□□ -1.31
TRAPPC2-205ENST00000517553 TBC1D12O60347 775 aa6.83□□□□□ -1.32
TRAPPC2-205ENST00000517553 KCNH8Q96L42 1107 aa6.83□□□□□ -1.32
TRAPPC2-205ENST00000517553 GOLGA8CPA6NN73 597 aa6.82□□□□□ -1.32
TRAPPC2-205ENST00000517553 FOXK1P85037 733 aa6.82□□□□□ -1.32
TRAPPC2-205ENST00000517553 DSG2Q14126 1118 aa6.82□□□□□ -1.32
TRAPPC2-205ENST00000517553 NKX1-1Q15270 411 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC2-205ENST00000517553 LAPTM4AQ15012 233 aa6.81□□□□□ -1.32
TRAPPC2-205ENST00000517553 ZNF454Q8N9F8 522 aa6.81□□□□□ -1.32
TRAPPC2-205ENST00000517553 UPF1Q92900 1129 aaKnown RBP eCLIP6.81□□□□□ -1.32
TRAPPC2-205ENST00000517553 GTPBP6O43824 516 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC2-205ENST00000517553 GFRA3O60609 400 aa6.8□□□□□ -1.32
TRAPPC2-205ENST00000517553 THSD4Q6ZMP0 1018 aa6.8□□□□□ -1.32
TRAPPC2-205ENST00000517553 WNT2BQ93097 391 aa6.8□□□□□ -1.32
TRAPPC2-205ENST00000517553 GPHNQ9NQX3 736 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC2-205ENST00000517553 BHMG1C9JSJ3 638 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC2-205ENST00000517553 MRPL50Q8N5N7 158 aaKnown RBP6.77□□□□□ -1.33
TRAPPC2-205ENST00000517553 PTPREP23469 700 aa6.74□□□□□ -1.33
TRAPPC2-205ENST00000517553 BCL2L12Q9HB09 334 aa6.74□□□□□ -1.33
TRAPPC2-205ENST00000517553 OXER1Q8TDS5 423 aa6.73□□□□□ -1.33
TRAPPC2-205ENST00000517553 ZBED2Q9BTP6 218 aa6.73□□□□□ -1.33
TRAPPC2-205ENST00000517553 TSHZ2Q9NRE2 1034 aa6.73□□□□□ -1.33
TRAPPC2-205ENST00000517553 SLC4A5Q9BY07 1137 aa6.71□□□□□ -1.34
TRAPPC2-205ENST00000517553 FOSBP53539 338 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms