RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 MLLT3P42568 568 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-202ENST00000517533 DSG2Q14126 1118 aa11.32□□□□□ -0.6
CTNNA1-202ENST00000517533 ASTLQ6HA08 431 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-202ENST00000517533 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-202ENST00000517533 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
CTNNA1-202ENST00000517533 DPYSL4O14531 572 aa11.27□□□□□ -0.61
CTNNA1-202ENST00000517533 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-202ENST00000517533 TULP1O00294 542 aaPredicted RBP11.26□□□□□ -0.61
CTNNA1-202ENST00000517533 KIF3CO14782 793 aa11.25□□□□□ -0.61
CTNNA1-202ENST00000517533 ZMYND10O75800 440 aa11.25□□□□□ -0.61
CTNNA1-202ENST00000517533 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-202ENST00000517533 PELP1Q8IZL8 1130 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-202ENST00000517533 FOXK1P85037 733 aa11.24□□□□□ -0.61
CTNNA1-202ENST00000517533 C2orf72A6NCS6 295 aa11.23□□□□□ -0.61
CTNNA1-202ENST00000517533 TMEM92Q6UXU6 159 aa11.23□□□□□ -0.61
CTNNA1-202ENST00000517533 OCEL1Q9H607 264 aa11.23□□□□□ -0.61
CTNNA1-202ENST00000517533 BOLA1Q9Y3E2 137 aa11.22□□□□□ -0.61
CTNNA1-202ENST00000517533 IER5LQ5T953 404 aa11.21□□□□□ -0.61
CTNNA1-202ENST00000517533 GABBR2O75899 941 aa11.2□□□□□ -0.62
CTNNA1-202ENST00000517533 CLCN6P51797 869 aa11.2□□□□□ -0.62
CTNNA1-202ENST00000517533 PDIA6Q15084 440 aa11.2□□□□□ -0.62
CTNNA1-202ENST00000517533 TMEM132AQ24JP5 1023 aa11.2□□□□□ -0.62
CTNNA1-202ENST00000517533 PLPP6Q8IY26 295 aa11.2□□□□□ -0.62
CTNNA1-202ENST00000517533 TMC2Q8TDI7 906 aa11.2□□□□□ -0.62
CTNNA1-202ENST00000517533 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-202ENST00000517533 SMYD5Q6GMV2 418 aa11.19□□□□□ -0.62
CTNNA1-202ENST00000517533 TIMELESSQ9UNS1 1208 aa11.19□□□□□ -0.62
CTNNA1-202ENST00000517533 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
CTNNA1-202ENST00000517533 GTF3C3Q9Y5Q9 886 aa11.18□□□□□ -0.62
CTNNA1-202ENST00000517533 BARGINQ6ZT62 677 aa11.17□□□□□ -0.62
CTNNA1-202ENST00000517533 POTEHQ6S545 545 aa11.16□□□□□ -0.62
CTNNA1-202ENST00000517533 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-202ENST00000517533 PLCG2P16885 1265 aa11.14□□□□□ -0.63
CTNNA1-202ENST00000517533 GPR37O15354 613 aa11.13□□□□□ -0.63
CTNNA1-202ENST00000517533 SPDYE16A6NNV3 312 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-202ENST00000517533 NEUROD2Q15784 382 aa11.12□□□□□ -0.63
CTNNA1-202ENST00000517533 GPIHBP1Q8IV16 184 aa11.12□□□□□ -0.63
CTNNA1-202ENST00000517533 POTEIP0CG38 1075 aa11.09□□□□□ -0.63
CTNNA1-202ENST00000517533 UPF1Q92900 1129 aaKnown RBP eCLIP11.09□□□□□ -0.63
CTNNA1-202ENST00000517533 OXER1Q8TDS5 423 aa11.07□□□□□ -0.64
CTNNA1-202ENST00000517533 PRIM1P49642 420 aaKnown RBP11.05□□□□□ -0.64
CTNNA1-202ENST00000517533 L3MBTL3Q96JM7 780 aaPredicted RBP11.05□□□□□ -0.64
CTNNA1-202ENST00000517533 GRXCR2A6NFK2 248 aa11.04□□□□□ -0.64
CTNNA1-202ENST00000517533 G3V3G9 751 aa11.04□□□□□ -0.64
CTNNA1-202ENST00000517533 GPBP1L1Q9HC44 474 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-202ENST00000517533 SEC24BO95487 1268 aa11.03□□□□□ -0.64
CTNNA1-202ENST00000517533 OSBPP22059 807 aa11.03□□□□□ -0.64
CTNNA1-202ENST00000517533 MAP3K9P80192 1104 aa11.03□□□□□ -0.64
CTNNA1-202ENST00000517533 AK7Q96M32 723 aa11.03□□□□□ -0.64
CTNNA1-202ENST00000517533 DCBLD2Q96PD2 775 aa11.03□□□□□ -0.64
CTNNA1-202ENST00000517533 ARXQ96QS3 562 aa11.01□□□□□ -0.65
CTNNA1-202ENST00000517533 SLC39A7Q92504 469 aa11□□□□□ -0.65
CTNNA1-202ENST00000517533 TRIM66O15016 1216 aa10.99□□□□□ -0.65
CTNNA1-202ENST00000517533 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-202ENST00000517533 DDX12PQ92771 950 aa10.99□□□□□ -0.65
CTNNA1-202ENST00000517533 METRNQ9UJH8 293 aa10.99□□□□□ -0.65
CTNNA1-202ENST00000517533 PTGER2P43116 358 aa10.98□□□□□ -0.65
CTNNA1-202ENST00000517533 C7P10643 843 aa10.97□□□□□ -0.65
CTNNA1-202ENST00000517533 FECHP22830 423 aa10.96□□□□□ -0.65
CTNNA1-202ENST00000517533 EVI5O60447 810 aa10.95□□□□□ -0.66
CTNNA1-202ENST00000517533 NUTM2FA1L443 756 aa10.94□□□□□ -0.66
CTNNA1-202ENST00000517533 PDE4DQ08499 809 aa10.94□□□□□ -0.66
CTNNA1-202ENST00000517533 PTCD2Q8WV60 388 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-202ENST00000517533 KDM4CQ9H3R0 1056 aa10.92□□□□□ -0.66
CTNNA1-202ENST00000517533 CCDC102AQ96A19 550 aa10.9□□□□□ -0.66
CTNNA1-202ENST00000517533 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-202ENST00000517533 IRF6O14896 467 aa10.88□□□□□ -0.67
CTNNA1-202ENST00000517533 SLC34A2O95436 690 aa10.88□□□□□ -0.67
CTNNA1-202ENST00000517533 MAP2K5Q13163 448 aa10.88□□□□□ -0.67
CTNNA1-202ENST00000517533 C3orf67Q6ZVT6 689 aa10.88□□□□□ -0.67
CTNNA1-202ENST00000517533 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
CTNNA1-202ENST00000517533 GNPATO15228 680 aa10.87□□□□□ -0.67
CTNNA1-202ENST00000517533 TBC1D12O60347 775 aa10.87□□□□□ -0.67
CTNNA1-202ENST00000517533 MINK1Q8N4C8 1332 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-202ENST00000517533 PTGDRQ13258 359 aa10.86□□□□□ -0.67
CTNNA1-202ENST00000517533 CDHR5Q9HBB8 845 aa10.86□□□□□ -0.67
CTNNA1-202ENST00000517533 FCHSD2O94868 740 aa10.84□□□□□ -0.67
CTNNA1-202ENST00000517533 POTEJP0CG39 1038 aa10.84□□□□□ -0.67
CTNNA1-202ENST00000517533 HIC1Q14526 733 aa10.84□□□□□ -0.67
CTNNA1-202ENST00000517533 NPDC1Q9NQX5 325 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-202ENST00000517533 KDM4FA0A1W2PPD8 638 aa10.83□□□□□ -0.68
CTNNA1-202ENST00000517533 C14orf37Q86TY3 774 aa10.83□□□□□ -0.68
CTNNA1-202ENST00000517533 FAM117AQ9C073 453 aa10.83□□□□□ -0.68
CTNNA1-202ENST00000517533 PARP9Q8IXQ6 854 aa10.82□□□□□ -0.68
CTNNA1-202ENST00000517533 SP7Q8TDD2 431 aaPredicted RBP10.82□□□□□ -0.68
CTNNA1-202ENST00000517533 PLEKHG3A1L390 1219 aa10.81□□□□□ -0.68
CTNNA1-202ENST00000517533 AMHR2Q16671 573 aa10.81□□□□□ -0.68
CTNNA1-202ENST00000517533 PCDHGA4Q9Y5G9 962 aa10.81□□□□□ -0.68
CTNNA1-202ENST00000517533 PCDHGA10Q9Y5H3 936 aa10.81□□□□□ -0.68
CTNNA1-202ENST00000517533 EN1Q05925 392 aaPredicted RBP10.79□□□□□ -0.68
CTNNA1-202ENST00000517533 TSR1Q2NL82 804 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-202ENST00000517533 RBM33Q96EV2 1170 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-202ENST00000517533 REPIN1Q9BWE0 567 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-202ENST00000517533 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-202ENST00000517533 POTEB2H3BUK9 544 aa10.77□□□□□ -0.69
CTNNA1-202ENST00000517533 PHF14O94880 888 aa10.77□□□□□ -0.69
CTNNA1-202ENST00000517533 KHSRPQ92945 711 aaKnown RBP eCLIP10.75□□□□□ -0.69
CTNNA1-202ENST00000517533 PHOX2BQ99453 314 aa10.75□□□□□ -0.69
CTNNA1-202ENST00000517533 HOMEZQ8IX15 550 aa10.74□□□□□ -0.69
CTNNA1-202ENST00000517533 EPAS1Q99814 870 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms