RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 DPY19L2Q6NUT2 758 aa10.01□□□□□ -0.81
LINC00534-201ENST00000517400 MFSD10Q14728 455 aa10□□□□□ -0.81
LINC00534-201ENST00000517400 LARP6Q9BRS8 491 aaKnown RBP10□□□□□ -0.81
LINC00534-201ENST00000517400 E2F4Q16254 413 aa9.99□□□□□ -0.81
LINC00534-201ENST00000517400 MAMSTRQ6ZN01 415 aa9.96□□□□□ -0.82
LINC00534-201ENST00000517400 MICALL2Q8IY33 904 aa9.96□□□□□ -0.82
LINC00534-201ENST00000517400 ARHGEF1Q92888 912 aaKnown RBP9.96□□□□□ -0.82
LINC00534-201ENST00000517400 DDX27Q96GQ7 796 aaKnown RBP9.96□□□□□ -0.82
LINC00534-201ENST00000517400 TMEM121BQ9BXQ6 578 aaPredicted RBP9.96□□□□□ -0.82
LINC00534-201ENST00000517400 SEC24BO95487 1268 aa9.95□□□□□ -0.82
LINC00534-201ENST00000517400 PLCG2P16885 1265 aa9.95□□□□□ -0.82
LINC00534-201ENST00000517400 GPHNQ9NQX3 736 aaPredicted RBP9.95□□□□□ -0.82
LINC00534-201ENST00000517400 BOLA1Q9Y3E2 137 aa9.94□□□□□ -0.82
LINC00534-201ENST00000517400 PRKCSHP14314 528 aaPredicted RBP9.92□□□□□ -0.82
LINC00534-201ENST00000517400 TPRNQ4KMQ1 711 aa9.92□□□□□ -0.82
LINC00534-201ENST00000517400 L3MBTL3Q96JM7 780 aaPredicted RBP9.92□□□□□ -0.82
LINC00534-201ENST00000517400 CAMK2BQ13554 666 aa9.91□□□□□ -0.82
LINC00534-201ENST00000517400 G3V3G9 751 aa9.9□□□□□ -0.82
LINC00534-201ENST00000517400 ARIH1Q9Y4X5 557 aaPredicted RBP9.9□□□□□ -0.82
LINC00534-201ENST00000517400 PPP1R15BQ5SWA1 713 aa9.89□□□□□ -0.83
LINC00534-201ENST00000517400 LCE2DQ5TA82 110 aaPredicted RBP9.89□□□□□ -0.83
LINC00534-201ENST00000517400 SCUBE2Q9NQ36 999 aa9.89□□□□□ -0.83
LINC00534-201ENST00000517400 FOXK1P85037 733 aa9.87□□□□□ -0.83
LINC00534-201ENST00000517400 TMC2Q8TDI7 906 aa9.87□□□□□ -0.83
LINC00534-201ENST00000517400 KIF3CO14782 793 aa9.85□□□□□ -0.83
LINC00534-201ENST00000517400 DSG2Q14126 1118 aa9.85□□□□□ -0.83
LINC00534-201ENST00000517400 C2orf72A6NCS6 295 aa9.82□□□□□ -0.84
LINC00534-201ENST00000517400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.81□□□□□ -0.84
LINC00534-201ENST00000517400 SEMA3EO15041 775 aa9.8□□□□□ -0.84
LINC00534-201ENST00000517400 TESPA1A2RU30 521 aaPredicted RBP9.79□□□□□ -0.84
LINC00534-201ENST00000517400 POTEMA6NI47 508 aa9.79□□□□□ -0.84
LINC00534-201ENST00000517400 TULP1O00294 542 aaPredicted RBP9.79□□□□□ -0.84
LINC00534-201ENST00000517400 TMEM92Q6UXU6 159 aa9.79□□□□□ -0.84
LINC00534-201ENST00000517400 PLPP6Q8IY26 295 aa9.79□□□□□ -0.84
LINC00534-201ENST00000517400 POTEGQ6S5H5 508 aa9.78□□□□□ -0.84
LINC00534-201ENST00000517400 EMILIN3Q9NT22 766 aa9.78□□□□□ -0.84
LINC00534-201ENST00000517400 LMOD2Q6P5Q4 547 aa9.76□□□□□ -0.85
LINC00534-201ENST00000517400 SLAIN1Q8ND83 568 aa9.76□□□□□ -0.85
LINC00534-201ENST00000517400 FAM163AQ96GL9 167 aaPredicted RBP9.76□□□□□ -0.85
LINC00534-201ENST00000517400 PLSCR2Q9NRY7 297 aa9.76□□□□□ -0.85
LINC00534-201ENST00000517400 SMYD5Q6GMV2 418 aa9.75□□□□□ -0.85
LINC00534-201ENST00000517400 SPDYE16A6NNV3 312 aaPredicted RBP9.73□□□□□ -0.85
LINC00534-201ENST00000517400 DPYSL4O14531 572 aa9.73□□□□□ -0.85
LINC00534-201ENST00000517400 C3orf67Q6ZVT6 689 aa9.73□□□□□ -0.85
LINC00534-201ENST00000517400 PDIA6Q15084 440 aa9.71□□□□□ -0.86
LINC00534-201ENST00000517400 MAP3K9P80192 1104 aa9.68□□□□□ -0.86
LINC00534-201ENST00000517400 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.68□□□□□ -0.86
LINC00534-201ENST00000517400 MLLT3P42568 568 aaPredicted RBP9.67□□□□□ -0.86
LINC00534-201ENST00000517400 OXER1Q8TDS5 423 aa9.67□□□□□ -0.86
LINC00534-201ENST00000517400 ST18O60284 1047 aa9.66□□□□□ -0.86
LINC00534-201ENST00000517400 SLC34A2O95436 690 aa9.64□□□□□ -0.87
LINC00534-201ENST00000517400 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
LINC00534-201ENST00000517400 PTCD2Q8WV60 388 aaKnown RBP9.64□□□□□ -0.87
LINC00534-201ENST00000517400 UPF1Q92900 1129 aaKnown RBP eCLIP9.63□□□□□ -0.87
LINC00534-201ENST00000517400 TBC1D12O60347 775 aa9.62□□□□□ -0.87
LINC00534-201ENST00000517400 PTGER2P43116 358 aa9.61□□□□□ -0.87
LINC00534-201ENST00000517400 RBM26Q5T8P6 1007 aaKnown RBP9.6□□□□□ -0.87
LINC00534-201ENST00000517400 PCDH10Q9P2E7 1040 aa9.6□□□□□ -0.87
LINC00534-201ENST00000517400 EVI5O60447 810 aa9.58□□□□□ -0.88
LINC00534-201ENST00000517400 ZMYND10O75800 440 aa9.57□□□□□ -0.88
LINC00534-201ENST00000517400 ANO8Q9HCE9 1232 aaPredicted RBP9.57□□□□□ -0.88
LINC00534-201ENST00000517400 GRXCR2A6NFK2 248 aa9.55□□□□□ -0.88
LINC00534-201ENST00000517400 SNPHO15079 494 aa9.55□□□□□ -0.88
LINC00534-201ENST00000517400 GPIHBP1Q8IV16 184 aa9.55□□□□□ -0.88
LINC00534-201ENST00000517400 ZNF316A6NFI3 1004 aaPredicted RBP9.54□□□□□ -0.88
LINC00534-201ENST00000517400 OSBPP22059 807 aa9.53□□□□□ -0.88
LINC00534-201ENST00000517400 BARGINQ6ZT62 677 aa9.52□□□□□ -0.89
LINC00534-201ENST00000517400 PCDHGA4Q9Y5G9 962 aa9.52□□□□□ -0.89
LINC00534-201ENST00000517400 HOXB3P14651 431 aaPredicted RBP9.51□□□□□ -0.89
LINC00534-201ENST00000517400 DDX12PQ92771 950 aa9.51□□□□□ -0.89
LINC00534-201ENST00000517400 CDAN1Q8IWY9 1227 aa9.5□□□□□ -0.89
LINC00534-201ENST00000517400 SLC24A3Q9HC58 644 aa9.5□□□□□ -0.89
LINC00534-201ENST00000517400 KDM4FA0A1W2PPD8 638 aa9.49□□□□□ -0.89
LINC00534-201ENST00000517400 DOK7Q18PE1 504 aa9.49□□□□□ -0.89
LINC00534-201ENST00000517400 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
LINC00534-201ENST00000517400 PHF14O94880 888 aa9.47□□□□□ -0.89
LINC00534-201ENST00000517400 ZSWIM6Q9HCJ5 1215 aa9.47□□□□□ -0.89
LINC00534-201ENST00000517400 GPR37O15354 613 aa9.46□□□□□ -0.9
LINC00534-201ENST00000517400 EPAS1Q99814 870 aa9.46□□□□□ -0.9
LINC00534-201ENST00000517400 POTEB3A0JP26 581 aa9.45□□□□□ -0.9
LINC00534-201ENST00000517400 NUTM2FA1L443 756 aa9.45□□□□□ -0.9
LINC00534-201ENST00000517400 POTEBQ6S5H4 581 aa9.45□□□□□ -0.9
LINC00534-201ENST00000517400 RIMBP2O15034 1052 aa9.44□□□□□ -0.9
LINC00534-201ENST00000517400 PRIM1P49642 420 aaKnown RBP9.44□□□□□ -0.9
LINC00534-201ENST00000517400 GPR153Q6NV75 609 aa9.43□□□□□ -0.9
LINC00534-201ENST00000517400 KRI1Q8N9T8 703 aaKnown RBP9.43□□□□□ -0.9
LINC00534-201ENST00000517400 AK7Q96M32 723 aa9.43□□□□□ -0.9
LINC00534-201ENST00000517400 PCDHGA10Q9Y5H3 936 aa9.43□□□□□ -0.9
LINC00534-201ENST00000517400 FCHSD2O94868 740 aa9.42□□□□□ -0.9
LINC00534-201ENST00000517400 EN1Q05925 392 aaPredicted RBP9.42□□□□□ -0.9
LINC00534-201ENST00000517400 ARSIQ5FYB1 569 aa9.41□□□□□ -0.9
LINC00534-201ENST00000517400 JPH4Q96JJ6 628 aa9.41□□□□□ -0.9
LINC00534-201ENST00000517400 BRPF1P55201 1214 aaPredicted RBP9.4□□□□□ -0.9
LINC00534-201ENST00000517400 HIC1Q14526 733 aa9.4□□□□□ -0.9
LINC00534-201ENST00000517400 TYW1BQ6NUM6 668 aa9.4□□□□□ -0.9
LINC00534-201ENST00000517400 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
LINC00534-201ENST00000517400 MINK1Q8N4C8 1332 aaPredicted RBP9.39□□□□□ -0.91
LINC00534-201ENST00000517400 GNPATO15228 680 aa9.39□□□□□ -0.91
LINC00534-201ENST00000517400 NUDT7P0C024 238 aa9.39□□□□□ -0.91
LINC00534-201ENST00000517400 FOSBP53539 338 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms