RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 Q8N3U1 123 aa1.36□□□□□ -2.19
RNU6-1238P-201ENST00000517215 TSPYL2Q9H2G4 693 aaPredicted RBP1.36□□□□□ -2.19
RNU6-1238P-201ENST00000517215 GOLGA2P5Q9HBQ8 144 aa1.36□□□□□ -2.19
RNU6-1238P-201ENST00000517215 RIMBP2O15034 1052 aa1.35□□□□□ -2.19
RNU6-1238P-201ENST00000517215 GSK3AP49840 483 aa1.35□□□□□ -2.19
RNU6-1238P-201ENST00000517215 KCNMA1Q12791 1236 aa1.35□□□□□ -2.19
RNU6-1238P-201ENST00000517215 ADGRD1Q6QNK2 874 aa1.35□□□□□ -2.19
RNU6-1238P-201ENST00000517215 MNX1P50219 401 aaPredicted RBP1.34□□□□□ -2.19
RNU6-1238P-201ENST00000517215 LCE2CQ5TA81 110 aa1.34□□□□□ -2.19
RNU6-1238P-201ENST00000517215 POTEEQ6S8J3 1075 aa1.34□□□□□ -2.19
RNU6-1238P-201ENST00000517215 TMEM151AQ8N4L1 468 aa1.34□□□□□ -2.19
RNU6-1238P-201ENST00000517215 ZSCAN1Q8NBB4 408 aa1.34□□□□□ -2.19
RNU6-1238P-201ENST00000517215 L3MBTL3Q96JM7 780 aaPredicted RBP1.34□□□□□ -2.19
RNU6-1238P-201ENST00000517215 AXIN2Q9Y2T1 843 aa1.34□□□□□ -2.19
RNU6-1238P-201ENST00000517215 COBLO75128 1261 aa1.33□□□□□ -2.2
RNU6-1238P-201ENST00000517215 PBX2P40425 430 aa1.33□□□□□ -2.2
RNU6-1238P-201ENST00000517215 ZNF316A6NFI3 1004 aaPredicted RBP1.32□□□□□ -2.2
RNU6-1238P-201ENST00000517215 HRO43593 1189 aa1.32□□□□□ -2.2
RNU6-1238P-201ENST00000517215 ADAM23O75077 832 aa1.32□□□□□ -2.2
RNU6-1238P-201ENST00000517215 GDF11O95390 407 aa1.32□□□□□ -2.2
RNU6-1238P-201ENST00000517215 MYT1Q01538 1121 aa1.32□□□□□ -2.2
RNU6-1238P-201ENST00000517215 GPR153Q6NV75 609 aa1.32□□□□□ -2.2
RNU6-1238P-201ENST00000517215 TMEM106CQ9BVX2 250 aa1.32□□□□□ -2.2
RNU6-1238P-201ENST00000517215 ZSWIM6Q9HCJ5 1215 aa1.32□□□□□ -2.2
RNU6-1238P-201ENST00000517215 PDZRN3Q9UPQ7 1066 aa1.32□□□□□ -2.2
RNU6-1238P-201ENST00000517215 ITGBL1O95965 494 aaPredicted RBP1.31□□□□□ -2.2
RNU6-1238P-201ENST00000517215 IGHA1P01876 353 aa1.31□□□□□ -2.2
RNU6-1238P-201ENST00000517215 GPAT2Q6NUI2 795 aa1.31□□□□□ -2.2
RNU6-1238P-201ENST00000517215 RASSF7Q02833 373 aa1.3□□□□□ -2.2
RNU6-1238P-201ENST00000517215 MKRN4PQ13434 485 aaPredicted RBP1.3□□□□□ -2.2
RNU6-1238P-201ENST00000517215 PDCD7Q8N8D1 485 aaKnown RBP1.3□□□□□ -2.2
RNU6-1238P-201ENST00000517215 STAC3Q96MF2 364 aa1.3□□□□□ -2.2
RNU6-1238P-201ENST00000517215 PRKD2Q9BZL6 878 aa1.3□□□□□ -2.2
RNU6-1238P-201ENST00000517215 TK2O00142 265 aa1.29□□□□□ -2.2
RNU6-1238P-201ENST00000517215 SGIP1Q9BQI5 828 aa1.29□□□□□ -2.2
RNU6-1238P-201ENST00000517215 PKDCCQ504Y2 493 aa1.28□□□□□ -2.2
RNU6-1238P-201ENST00000517215 TERTO14746 1132 aaKnown RBP1.27□□□□□ -2.21
RNU6-1238P-201ENST00000517215 DGAT1O75907 488 aa1.27□□□□□ -2.21
RNU6-1238P-201ENST00000517215 KRTAP1-1Q07627 177 aa1.27□□□□□ -2.21
RNU6-1238P-201ENST00000517215 ARSIQ5FYB1 569 aa1.27□□□□□ -2.21
RNU6-1238P-201ENST00000517215 THSD4Q6ZMP0 1018 aa1.27□□□□□ -2.21
RNU6-1238P-201ENST00000517215 STAG3Q9UJ98 1225 aa1.27□□□□□ -2.21
RNU6-1238P-201ENST00000517215 PCDHB13Q9Y5F0 798 aa1.27□□□□□ -2.21
RNU6-1238P-201ENST00000517215 V9GY48 417 aaPredicted RBP1.27□□□□□ -2.21
RNU6-1238P-201ENST00000517215 C11orf95C9JLR9 678 aaPredicted RBP1.26□□□□□ -2.21
RNU6-1238P-201ENST00000517215 ARHGAP33O14559 1287 aa1.26□□□□□ -2.21
RNU6-1238P-201ENST00000517215 KCNC4Q03721 635 aa1.25□□□□□ -2.21
RNU6-1238P-201ENST00000517215 IFNL1Q8IU54 200 aa1.25□□□□□ -2.21
RNU6-1238P-201ENST00000517215 EHMT2Q96KQ7 1210 aa1.25□□□□□ -2.21
RNU6-1238P-201ENST00000517215 ST8SIA5O15466 376 aa1.24□□□□□ -2.21
RNU6-1238P-201ENST00000517215 GMPRP36959 345 aa1.24□□□□□ -2.21
RNU6-1238P-201ENST00000517215 KHSRPQ92945 711 aaKnown RBP eCLIP1.24□□□□□ -2.21
RNU6-1238P-201ENST00000517215 AAASQ9NRG9 546 aa1.24□□□□□ -2.21
RNU6-1238P-201ENST00000517215 DNMT3AQ9Y6K1 912 aaPredicted RBP1.24□□□□□ -2.21
RNU6-1238P-201ENST00000517215 FOXK2Q01167 660 aa1.23□□□□□ -2.21
RNU6-1238P-201ENST00000517215 DMRTA1Q5VZB9 504 aa1.23□□□□□ -2.21
RNU6-1238P-201ENST00000517215 GMPR2Q9P2T1 348 aaKnown RBP1.23□□□□□ -2.21
RNU6-1238P-201ENST00000517215 RNF225M0QZC1 329 aaPredicted RBP1.22□□□□□ -2.21
RNU6-1238P-201ENST00000517215 YBX3P16989 372 aaKnown RBP eCLIP1.22□□□□□ -2.21
RNU6-1238P-201ENST00000517215 FZD5Q13467 585 aa1.22□□□□□ -2.21
RNU6-1238P-201ENST00000517215 K7ELQ4 463 aaPredicted RBP1.21□□□□□ -2.22
RNU6-1238P-201ENST00000517215 TRIM67Q6ZTA4 783 aa1.21□□□□□ -2.22
RNU6-1238P-201ENST00000517215 CCER1Q8TC90 406 aaPredicted RBP1.21□□□□□ -2.22
RNU6-1238P-201ENST00000517215 SLC16A10Q8TF71 515 aa1.21□□□□□ -2.22
RNU6-1238P-201ENST00000517215 WNT2BQ93097 391 aa1.21□□□□□ -2.22
RNU6-1238P-201ENST00000517215 DACH1Q9UI36 760 aa1.21□□□□□ -2.22
RNU6-1238P-201ENST00000517215 FAM187AA6NFU0 413 aa1.2□□□□□ -2.22
RNU6-1238P-201ENST00000517215 G3V3G9 751 aa1.2□□□□□ -2.22
RNU6-1238P-201ENST00000517215 PSEN2P49810 448 aa1.2□□□□□ -2.22
RNU6-1238P-201ENST00000517215 DCAF8Q5TAQ9 597 aa1.2□□□□□ -2.22
RNU6-1238P-201ENST00000517215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP1.2□□□□□ -2.22
RNU6-1238P-201ENST00000517215 BOLA1Q9Y3E2 137 aa1.2□□□□□ -2.22
RNU6-1238P-201ENST00000517215 GOLGA8CPA6NN73 597 aa1.19□□□□□ -2.22
RNU6-1238P-201ENST00000517215 MSTNO14793 375 aa1.19□□□□□ -2.22
RNU6-1238P-201ENST00000517215 DPY19L2Q6NUT2 758 aa1.19□□□□□ -2.22
RNU6-1238P-201ENST00000517215 WBP1LQ9NX94 342 aa1.19□□□□□ -2.22
RNU6-1238P-201ENST00000517215 LHX6Q9UPM6 363 aa1.19□□□□□ -2.22
RNU6-1238P-201ENST00000517215 SLURP2P0DP57 97 aa1.18□□□□□ -2.22
RNU6-1238P-201ENST00000517215 MKRN3Q13064 507 aaKnown RBP1.18□□□□□ -2.22
RNU6-1238P-201ENST00000517215 LCE5AQ5TCM9 118 aa1.18□□□□□ -2.22
RNU6-1238P-201ENST00000517215 IRF7Q92985 503 aa1.18□□□□□ -2.22
RNU6-1238P-201ENST00000517215 NUDT7P0C024 238 aa1.17□□□□□ -2.22
RNU6-1238P-201ENST00000517215 RGS19P49795 217 aa1.17□□□□□ -2.22
RNU6-1238P-201ENST00000517215 ILDR1Q86SU0 546 aaPredicted RBP1.17□□□□□ -2.22
RNU6-1238P-201ENST00000517215 RASEFQ8IZ41 740 aa1.17□□□□□ -2.22
RNU6-1238P-201ENST00000517215 SNRPBP14678 240 aaKnown RBP1.16□□□□□ -2.22
RNU6-1238P-201ENST00000517215 IRS1P35568 1242 aa1.16□□□□□ -2.22
RNU6-1238P-201ENST00000517215 PRR20EP86478 221 aa1.16□□□□□ -2.22
RNU6-1238P-201ENST00000517215 PRR20CP86479 221 aa1.16□□□□□ -2.22
RNU6-1238P-201ENST00000517215 PRR20DP86480 221 aa1.16□□□□□ -2.22
RNU6-1238P-201ENST00000517215 PRR20BP86481 221 aa1.16□□□□□ -2.22
RNU6-1238P-201ENST00000517215 PRR20AP86496 221 aa1.16□□□□□ -2.22
RNU6-1238P-201ENST00000517215 PPP1R18Q6NYC8 613 aa1.16□□□□□ -2.22
RNU6-1238P-201ENST00000517215 NYAP1Q6ZVC0 841 aa1.16□□□□□ -2.22
RNU6-1238P-201ENST00000517215 CRIPAKQ8N1N5 446 aa1.16□□□□□ -2.22
RNU6-1238P-201ENST00000517215 SPOCK3Q9BQ16 436 aa1.16□□□□□ -2.22
RNU6-1238P-201ENST00000517215 VPS9D1Q9Y2B5 631 aa1.16□□□□□ -2.22
RNU6-1238P-201ENST00000517215 PSDA5PKW4 1024 aaPredicted RBP1.15□□□□□ -2.23
RNU6-1238P-201ENST00000517215 BHMG1C9JSJ3 638 aaPredicted RBP1.15□□□□□ -2.23
RNU6-1238P-201ENST00000517215 LCE4AQ5TA78 99 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms