RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 G3V3G9 751 aa11.13□□□□□ -0.63
RNU6-1028P-201ENST00000517164 KCNV2Q8TDN2 545 aa11.13□□□□□ -0.63
RNU6-1028P-201ENST00000517164 MFSD10Q14728 455 aa11.12□□□□□ -0.63
RNU6-1028P-201ENST00000517164 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
RNU6-1028P-201ENST00000517164 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
RNU6-1028P-201ENST00000517164 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
RNU6-1028P-201ENST00000517164 GPHNQ9NQX3 736 aaPredicted RBP11.1□□□□□ -0.63
RNU6-1028P-201ENST00000517164 NBR1Q14596 966 aa11.09□□□□□ -0.63
RNU6-1028P-201ENST00000517164 E2F4Q16254 413 aa11.08□□□□□ -0.64
RNU6-1028P-201ENST00000517164 TMC2Q8TDI7 906 aa11.06□□□□□ -0.64
RNU6-1028P-201ENST00000517164 PPP1R15BQ5SWA1 713 aa11.05□□□□□ -0.64
RNU6-1028P-201ENST00000517164 DSG2Q14126 1118 aa11.04□□□□□ -0.64
RNU6-1028P-201ENST00000517164 TMEM92Q6UXU6 159 aa11.04□□□□□ -0.64
RNU6-1028P-201ENST00000517164 C2orf72A6NCS6 295 aa11.03□□□□□ -0.64
RNU6-1028P-201ENST00000517164 KIF3CO14782 793 aa11.03□□□□□ -0.64
RNU6-1028P-201ENST00000517164 FOXK1P85037 733 aa11.01□□□□□ -0.65
RNU6-1028P-201ENST00000517164 CAMK2BQ13554 666 aa11.01□□□□□ -0.65
RNU6-1028P-201ENST00000517164 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
RNU6-1028P-201ENST00000517164 C3orf67Q6ZVT6 689 aa10.99□□□□□ -0.65
RNU6-1028P-201ENST00000517164 PLPP6Q8IY26 295 aa10.97□□□□□ -0.65
RNU6-1028P-201ENST00000517164 EMILIN3Q9NT22 766 aa10.95□□□□□ -0.66
RNU6-1028P-201ENST00000517164 ARIH1Q9Y4X5 557 aaPredicted RBP10.94□□□□□ -0.66
RNU6-1028P-201ENST00000517164 POTEB2H3BUK9 544 aa10.93□□□□□ -0.66
RNU6-1028P-201ENST00000517164 POTEJP0CG39 1038 aa10.93□□□□□ -0.66
RNU6-1028P-201ENST00000517164 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.92□□□□□ -0.66
RNU6-1028P-201ENST00000517164 DPYSL4O14531 572 aa10.9□□□□□ -0.66
RNU6-1028P-201ENST00000517164 SEMA3EO15041 775 aa10.89□□□□□ -0.67
RNU6-1028P-201ENST00000517164 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
RNU6-1028P-201ENST00000517164 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
RNU6-1028P-201ENST00000517164 UPF1Q92900 1129 aaKnown RBP eCLIP10.85□□□□□ -0.67
RNU6-1028P-201ENST00000517164 TESPA1A2RU30 521 aaPredicted RBP10.84□□□□□ -0.67
RNU6-1028P-201ENST00000517164 PDIA6Q15084 440 aa10.82□□□□□ -0.68
RNU6-1028P-201ENST00000517164 OXER1Q8TDS5 423 aa10.82□□□□□ -0.68
RNU6-1028P-201ENST00000517164 MAP3K9P80192 1104 aa10.81□□□□□ -0.68
RNU6-1028P-201ENST00000517164 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.8□□□□□ -0.68
RNU6-1028P-201ENST00000517164 SPDYE16A6NNV3 312 aaPredicted RBP10.79□□□□□ -0.68
RNU6-1028P-201ENST00000517164 LMOD2Q6P5Q4 547 aa10.79□□□□□ -0.68
RNU6-1028P-201ENST00000517164 SCUBE2Q9NQ36 999 aa10.79□□□□□ -0.68
RNU6-1028P-201ENST00000517164 MLLT3P42568 568 aaPredicted RBP10.78□□□□□ -0.68
RNU6-1028P-201ENST00000517164 MAMSTRQ6ZN01 415 aa10.78□□□□□ -0.68
RNU6-1028P-201ENST00000517164 SLAIN1Q8ND83 568 aa10.78□□□□□ -0.68
RNU6-1028P-201ENST00000517164 TULP1O00294 542 aaPredicted RBP10.77□□□□□ -0.69
RNU6-1028P-201ENST00000517164 SLC34A2O95436 690 aa10.77□□□□□ -0.69
RNU6-1028P-201ENST00000517164 PTCD2Q8WV60 388 aaKnown RBP10.77□□□□□ -0.69
RNU6-1028P-201ENST00000517164 TBC1D12O60347 775 aa10.73□□□□□ -0.69
RNU6-1028P-201ENST00000517164 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
RNU6-1028P-201ENST00000517164 EVI5O60447 810 aa10.72□□□□□ -0.69
RNU6-1028P-201ENST00000517164 PCDHGA4Q9Y5G9 962 aa10.71□□□□□ -0.69
RNU6-1028P-201ENST00000517164 HOXB3P14651 431 aaPredicted RBP10.7□□□□□ -0.7
RNU6-1028P-201ENST00000517164 GRXCR2A6NFK2 248 aa10.69□□□□□ -0.7
RNU6-1028P-201ENST00000517164 OTUD5Q96G74 571 aa10.69□□□□□ -0.7
RNU6-1028P-201ENST00000517164 RBM26Q5T8P6 1007 aaKnown RBP10.68□□□□□ -0.7
RNU6-1028P-201ENST00000517164 DOK7Q18PE1 504 aa10.67□□□□□ -0.7
RNU6-1028P-201ENST00000517164 LHX8Q68G74 356 aa10.67□□□□□ -0.7
RNU6-1028P-201ENST00000517164 DDX12PQ92771 950 aa10.67□□□□□ -0.7
RNU6-1028P-201ENST00000517164 ZNF316A6NFI3 1004 aaPredicted RBP10.66□□□□□ -0.7
RNU6-1028P-201ENST00000517164 PTGER2P43116 358 aa10.66□□□□□ -0.7
RNU6-1028P-201ENST00000517164 ANO8Q9HCE9 1232 aaPredicted RBP10.66□□□□□ -0.7
RNU6-1028P-201ENST00000517164 ZC3H15Q8WU90 426 aaKnown RBP10.64□□□□□ -0.71
RNU6-1028P-201ENST00000517164 KHSRPQ92945 711 aaKnown RBP eCLIP10.64□□□□□ -0.71
RNU6-1028P-201ENST00000517164 KDM4FA0A1W2PPD8 638 aa10.63□□□□□ -0.71
RNU6-1028P-201ENST00000517164 ARSIQ5FYB1 569 aa10.63□□□□□ -0.71
RNU6-1028P-201ENST00000517164 RIMBP2O15034 1052 aa10.62□□□□□ -0.71
RNU6-1028P-201ENST00000517164 OSBPP22059 807 aa10.62□□□□□ -0.71
RNU6-1028P-201ENST00000517164 NUDT7P0C024 238 aa10.61□□□□□ -0.71
RNU6-1028P-201ENST00000517164 GPR153Q6NV75 609 aa10.61□□□□□ -0.71
RNU6-1028P-201ENST00000517164 ZNF710Q8N1W2 664 aa10.61□□□□□ -0.71
RNU6-1028P-201ENST00000517164 GPIHBP1Q8IV16 184 aa10.6□□□□□ -0.71
RNU6-1028P-201ENST00000517164 ZSWIM6Q9HCJ5 1215 aa10.6□□□□□ -0.71
RNU6-1028P-201ENST00000517164 PRIM1P49642 420 aaKnown RBP10.59□□□□□ -0.71
RNU6-1028P-201ENST00000517164 SNPHO15079 494 aa10.58□□□□□ -0.72
RNU6-1028P-201ENST00000517164 PHF14O94880 888 aa10.56□□□□□ -0.72
RNU6-1028P-201ENST00000517164 PCDHGA10Q9Y5H3 936 aa10.56□□□□□ -0.72
RNU6-1028P-201ENST00000517164 NUTM2FA1L443 756 aa10.55□□□□□ -0.72
RNU6-1028P-201ENST00000517164 ZMYND10O75800 440 aa10.55□□□□□ -0.72
RNU6-1028P-201ENST00000517164 GPR37O15354 613 aa10.54□□□□□ -0.72
RNU6-1028P-201ENST00000517164 JPH4Q96JJ6 628 aa10.54□□□□□ -0.72
RNU6-1028P-201ENST00000517164 EN1Q05925 392 aaPredicted RBP10.53□□□□□ -0.72
RNU6-1028P-201ENST00000517164 EPAS1Q99814 870 aa10.53□□□□□ -0.72
RNU6-1028P-201ENST00000517164 FOSBP53539 338 aa10.52□□□□□ -0.73
RNU6-1028P-201ENST00000517164 LHX6Q9UPM6 363 aa10.52□□□□□ -0.73
RNU6-1028P-201ENST00000517164 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
RNU6-1028P-201ENST00000517164 TYW1BQ6NUM6 668 aa10.51□□□□□ -0.73
RNU6-1028P-201ENST00000517164 ZNF454Q8N9F8 522 aa10.51□□□□□ -0.73
RNU6-1028P-201ENST00000517164 RBM33Q96EV2 1170 aaKnown RBP10.51□□□□□ -0.73
RNU6-1028P-201ENST00000517164 BARGINQ6ZT62 677 aa10.5□□□□□ -0.73
RNU6-1028P-201ENST00000517164 MAP3K7O43318 606 aa10.49□□□□□ -0.73
RNU6-1028P-201ENST00000517164 CDHR5Q9HBB8 845 aa10.49□□□□□ -0.73
RNU6-1028P-201ENST00000517164 SLC24A3Q9HC58 644 aa10.49□□□□□ -0.73
RNU6-1028P-201ENST00000517164 TSR1Q2NL82 804 aaKnown RBP10.48□□□□□ -0.73
RNU6-1028P-201ENST00000517164 FBXW7Q969H0 707 aa10.48□□□□□ -0.73
RNU6-1028P-201ENST00000517164 ZDHHC16Q969W1 377 aa10.47□□□□□ -0.73
RNU6-1028P-201ENST00000517164 FCHSD2O94868 740 aa10.46□□□□□ -0.73
RNU6-1028P-201ENST00000517164 PTGDRQ13258 359 aa10.46□□□□□ -0.73
RNU6-1028P-201ENST00000517164 ADAM33Q9BZ11 813 aa10.45□□□□□ -0.74
RNU6-1028P-201ENST00000517164 HIC1Q14526 733 aa10.44□□□□□ -0.74
RNU6-1028P-201ENST00000517164 NPDC1Q9NQX5 325 aaPredicted RBP10.44□□□□□ -0.74
RNU6-1028P-201ENST00000517164 GNPATO15228 680 aa10.43□□□□□ -0.74
RNU6-1028P-201ENST00000517164 FECHP22830 423 aa10.43□□□□□ -0.74
RNU6-1028P-201ENST00000517164 KRI1Q8N9T8 703 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms