RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 DNAJC5Q9H3Z4 198 aa8.49□□□□□ -1.05
RNU6-1088P-201ENST00000516850 PPP1R37O75864 691 aa8.48□□□□□ -1.05
RNU6-1088P-201ENST00000516850 EMP3P54852 163 aa8.48□□□□□ -1.05
RNU6-1088P-201ENST00000516850 MARVELD3Q96A59 401 aa8.48□□□□□ -1.05
RNU6-1088P-201ENST00000516850 HOXB3P14651 431 aaPredicted RBP8.46□□□□□ -1.06
RNU6-1088P-201ENST00000516850 CDAN1Q8IWY9 1227 aa8.45□□□□□ -1.06
RNU6-1088P-201ENST00000516850 C2orf72A6NCS6 295 aa8.44□□□□□ -1.06
RNU6-1088P-201ENST00000516850 NKX1-1Q15270 411 aaPredicted RBP8.44□□□□□ -1.06
RNU6-1088P-201ENST00000516850 ZSWIM6Q9HCJ5 1215 aa8.44□□□□□ -1.06
RNU6-1088P-201ENST00000516850 PLSCR2Q9NRY7 297 aa8.44□□□□□ -1.06
RNU6-1088P-201ENST00000516850 HOXB1P14653 301 aaPredicted RBP8.43□□□□□ -1.06
RNU6-1088P-201ENST00000516850 FAM205CA6NFA0 338 aa8.42□□□□□ -1.06
RNU6-1088P-201ENST00000516850 KIF3CO14782 793 aa8.41□□□□□ -1.06
RNU6-1088P-201ENST00000516850 ERBB3P21860 1342 aa8.4□□□□□ -1.06
RNU6-1088P-201ENST00000516850 HS3ST6Q96QI5 342 aa8.38□□□□□ -1.07
RNU6-1088P-201ENST00000516850 RTN4Q9NQC3 1192 aaKnown RBP8.38□□□□□ -1.07
RNU6-1088P-201ENST00000516850 GTPBP6O43824 516 aaPredicted RBP8.37□□□□□ -1.07
RNU6-1088P-201ENST00000516850 ARSIQ5FYB1 569 aa8.36□□□□□ -1.07
RNU6-1088P-201ENST00000516850 GPR153Q6NV75 609 aa8.36□□□□□ -1.07
RNU6-1088P-201ENST00000516850 GPHNQ9NQX3 736 aaPredicted RBP8.36□□□□□ -1.07
RNU6-1088P-201ENST00000516850 FOXK1P85037 733 aa8.34□□□□□ -1.07
RNU6-1088P-201ENST00000516850 BBXQ8WY36 941 aaPredicted RBP8.34□□□□□ -1.07
RNU6-1088P-201ENST00000516850 SLC34A2O95436 690 aa8.33□□□□□ -1.08
RNU6-1088P-201ENST00000516850 PDE4AP27815 886 aa8.33□□□□□ -1.08
RNU6-1088P-201ENST00000516850 PLPP6Q8IY26 295 aa8.33□□□□□ -1.08
RNU6-1088P-201ENST00000516850 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.33□□□□□ -1.08
RNU6-1088P-201ENST00000516850 VARS2Q5ST30 1063 aaKnown RBP8.32□□□□□ -1.08
RNU6-1088P-201ENST00000516850 TBC1D12O60347 775 aa8.31□□□□□ -1.08
RNU6-1088P-201ENST00000516850 PCDHGA4Q9Y5G9 962 aa8.31□□□□□ -1.08
RNU6-1088P-201ENST00000516850 DSG2Q14126 1118 aa8.3□□□□□ -1.08
RNU6-1088P-201ENST00000516850 KHSRPQ92945 711 aaKnown RBP eCLIP8.3□□□□□ -1.08
RNU6-1088P-201ENST00000516850 POTEB3A0JP26 581 aa8.29□□□□□ -1.08
RNU6-1088P-201ENST00000516850 NUDT7P0C024 238 aa8.29□□□□□ -1.08
RNU6-1088P-201ENST00000516850 POTEBQ6S5H4 581 aa8.29□□□□□ -1.08
RNU6-1088P-201ENST00000516850 ZNF316A6NFI3 1004 aaPredicted RBP8.28□□□□□ -1.08
RNU6-1088P-201ENST00000516850 PPP1R15BQ5SWA1 713 aa8.27□□□□□ -1.09
RNU6-1088P-201ENST00000516850 SPRYD3Q8NCJ5 442 aa8.27□□□□□ -1.09
RNU6-1088P-201ENST00000516850 CRISPLD2Q9H0B8 497 aa8.27□□□□□ -1.09
RNU6-1088P-201ENST00000516850 ZNF687Q8N1G0 1237 aa8.26□□□□□ -1.09
RNU6-1088P-201ENST00000516850 PTCD2Q8WV60 388 aaKnown RBP8.26□□□□□ -1.09
RNU6-1088P-201ENST00000516850 DDX27Q96GQ7 796 aaKnown RBP8.25□□□□□ -1.09
RNU6-1088P-201ENST00000516850 LARP6Q9BRS8 491 aaKnown RBP8.25□□□□□ -1.09
RNU6-1088P-201ENST00000516850 LHX6Q9UPM6 363 aa8.24□□□□□ -1.09
RNU6-1088P-201ENST00000516850 NCKAP5LQ9HCH0 1330 aa8.24□□□□□ -1.09
RNU6-1088P-201ENST00000516850 PSDA5PKW4 1024 aaPredicted RBP8.23□□□□□ -1.09
RNU6-1088P-201ENST00000516850 SPNS2Q8IVW8 549 aa8.22□□□□□ -1.09
RNU6-1088P-201ENST00000516850 UPF1Q92900 1129 aaKnown RBP eCLIP8.22□□□□□ -1.09
RNU6-1088P-201ENST00000516850 CFAP44Q96MT7 982 aa8.22□□□□□ -1.09
RNU6-1088P-201ENST00000516850 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
RNU6-1088P-201ENST00000516850 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
RNU6-1088P-201ENST00000516850 PAXIP1Q6ZW49 1069 aaPredicted RBP8.2□□□□□ -1.1
RNU6-1088P-201ENST00000516850 OXER1Q8TDS5 423 aa8.18□□□□□ -1.1
RNU6-1088P-201ENST00000516850 PBX2P40425 430 aa8.17□□□□□ -1.1
RNU6-1088P-201ENST00000516850 MAP3K9P80192 1104 aa8.17□□□□□ -1.1
RNU6-1088P-201ENST00000516850 MMRN1Q13201 1228 aa8.17□□□□□ -1.1
RNU6-1088P-201ENST00000516850 MFSD10Q14728 455 aa8.17□□□□□ -1.1
RNU6-1088P-201ENST00000516850 CADPS2Q86UW7 1296 aa8.17□□□□□ -1.1
RNU6-1088P-201ENST00000516850 PPP4R3BQ5MIZ7 849 aa8.16□□□□□ -1.1
RNU6-1088P-201ENST00000516850 ANKRD13DQ6ZTN6 518 aa8.16□□□□□ -1.1
RNU6-1088P-201ENST00000516850 KCNH8Q96L42 1107 aa8.14□□□□□ -1.11
RNU6-1088P-201ENST00000516850 KDM4FA0A1W2PPD8 638 aa8.13□□□□□ -1.11
RNU6-1088P-201ENST00000516850 ARHGAP33O14559 1287 aa8.12□□□□□ -1.11
RNU6-1088P-201ENST00000516850 EVI5O60447 810 aa8.12□□□□□ -1.11
RNU6-1088P-201ENST00000516850 LSM11P83369 360 aaKnown RBP eCLIP8.12□□□□□ -1.11
RNU6-1088P-201ENST00000516850 WDR70Q9NW82 654 aa8.12□□□□□ -1.11
RNU6-1088P-201ENST00000516850 PTGER2P43116 358 aa8.11□□□□□ -1.11
RNU6-1088P-201ENST00000516850 AXIN2Q9Y2T1 843 aa8.11□□□□□ -1.11
RNU6-1088P-201ENST00000516850 ZNF454Q8N9F8 522 aa8.1□□□□□ -1.11
RNU6-1088P-201ENST00000516850 ANO8Q9HCE9 1232 aaPredicted RBP8.08□□□□□ -1.12
RNU6-1088P-201ENST00000516850 EMILIN3Q9NT22 766 aa8.08□□□□□ -1.12
RNU6-1088P-201ENST00000516850 MYT1LQ9UL68 1186 aa8.08□□□□□ -1.12
RNU6-1088P-201ENST00000516850 RNF166Q96A37 237 aaPredicted RBP8.07□□□□□ -1.12
RNU6-1088P-201ENST00000516850 CAMK2BQ13554 666 aa8.06□□□□□ -1.12
RNU6-1088P-201ENST00000516850 POTEEQ6S8J3 1075 aa8.06□□□□□ -1.12
RNU6-1088P-201ENST00000516850 STAC3Q96MF2 364 aa8.06□□□□□ -1.12
RNU6-1088P-201ENST00000516850 PSEN2P49810 448 aa8.05□□□□□ -1.12
RNU6-1088P-201ENST00000516850 JPH4Q96JJ6 628 aa8.05□□□□□ -1.12
RNU6-1088P-201ENST00000516850 KCNK17Q96T54 332 aa8.05□□□□□ -1.12
RNU6-1088P-201ENST00000516850 PTPREP23469 700 aa8.04□□□□□ -1.12
RNU6-1088P-201ENST00000516850 FOSBP53539 338 aa8.04□□□□□ -1.12
RNU6-1088P-201ENST00000516850 ZDHHC16Q969W1 377 aa8.04□□□□□ -1.12
RNU6-1088P-201ENST00000516850 DPYSL4O14531 572 aa8.03□□□□□ -1.12
RNU6-1088P-201ENST00000516850 E2F4Q16254 413 aa8.03□□□□□ -1.12
RNU6-1088P-201ENST00000516850 ADGRD1Q6QNK2 874 aa8.03□□□□□ -1.12
RNU6-1088P-201ENST00000516850 BCL2L12Q9HB09 334 aa8.03□□□□□ -1.12
RNU6-1088P-201ENST00000516850 TK2O00142 265 aa8.02□□□□□ -1.13
RNU6-1088P-201ENST00000516850 DMRTA1Q5VZB9 504 aa8.01□□□□□ -1.13
RNU6-1088P-201ENST00000516850 PHF14O94880 888 aa8□□□□□ -1.13
RNU6-1088P-201ENST00000516850 TYW1BQ6NUM6 668 aa7.99□□□□□ -1.13
RNU6-1088P-201ENST00000516850 FBXW7Q969H0 707 aa7.99□□□□□ -1.13
RNU6-1088P-201ENST00000516850 SPDYE16A6NNV3 312 aaPredicted RBP7.98□□□□□ -1.13
RNU6-1088P-201ENST00000516850 EPAS1Q99814 870 aa7.98□□□□□ -1.13
RNU6-1088P-201ENST00000516850 ADAM33Q9BZ11 813 aa7.98□□□□□ -1.13
RNU6-1088P-201ENST00000516850 PCDHGA10Q9Y5H3 936 aa7.98□□□□□ -1.13
RNU6-1088P-201ENST00000516850 TSHZ2Q9NRE2 1034 aa7.96□□□□□ -1.14
RNU6-1088P-201ENST00000516850 DDX12PQ92771 950 aa7.95□□□□□ -1.14
RNU6-1088P-201ENST00000516850 SLC4A5Q9BY07 1137 aa7.95□□□□□ -1.14
RNU6-1088P-201ENST00000516850 VPS9D1Q9Y2B5 631 aa7.95□□□□□ -1.14
RNU6-1088P-201ENST00000516850 HRO43593 1189 aa7.94□□□□□ -1.14
RNU6-1088P-201ENST00000516850 PDIA6Q15084 440 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms