RNA–Protein interactions for RNA: ENST00000516539.1

RNU6-1256P-201, Transcript of RNA, U6 small nuclear 1256, pseudogene, humanhuman

BASIC

Gene RNU6-1256P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1256P-201ENST00000516539 MLLT3P42568 568 aaPredicted RBP6.11□□□□□ -1.43
RNU6-1256P-201ENST00000516539 CHRDL2Q6WN34 429 aa6.11□□□□□ -1.43
RNU6-1256P-201ENST00000516539 PIP4P2Q8N4L2 257 aa6.11□□□□□ -1.43
RNU6-1256P-201ENST00000516539 TIE1P35590 1138 aa6.1□□□□□ -1.43
RNU6-1256P-201ENST00000516539 KDM4CQ9H3R0 1056 aa6.1□□□□□ -1.43
RNU6-1256P-201ENST00000516539 SUPT5HO00267 1087 aaKnown RBP6.09□□□□□ -1.43
RNU6-1256P-201ENST00000516539 GPBP1L1Q9HC44 474 aaPredicted RBP6.09□□□□□ -1.43
RNU6-1256P-201ENST00000516539 DPYSL4O14531 572 aa6.08□□□□□ -1.44
RNU6-1256P-201ENST00000516539 TRIM66O15016 1216 aa6.08□□□□□ -1.44
RNU6-1256P-201ENST00000516539 PDE4DQ08499 809 aa6.08□□□□□ -1.44
RNU6-1256P-201ENST00000516539 ILDR1Q86SU0 546 aaPredicted RBP6.08□□□□□ -1.44
RNU6-1256P-201ENST00000516539 MS4A3Q96HJ5 214 aa6.08□□□□□ -1.44
RNU6-1256P-201ENST00000516539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.08□□□□□ -1.44
RNU6-1256P-201ENST00000516539 TMC2Q8TDI7 906 aa6.07□□□□□ -1.44
RNU6-1256P-201ENST00000516539 FOXK1P85037 733 aa6.06□□□□□ -1.44
RNU6-1256P-201ENST00000516539 EMILIN3Q9NT22 766 aa6.06□□□□□ -1.44
RNU6-1256P-201ENST00000516539 DSG2Q14126 1118 aa6.05□□□□□ -1.44
RNU6-1256P-201ENST00000516539 IL27Q8NEV9 243 aa6.05□□□□□ -1.44
RNU6-1256P-201ENST00000516539 DDRGK1Q96HY6 314 aa6.05□□□□□ -1.44
RNU6-1256P-201ENST00000516539 RSPH6AQ9H0K4 717 aa6.05□□□□□ -1.44
RNU6-1256P-201ENST00000516539 MINK1Q8N4C8 1332 aaPredicted RBP6.04□□□□□ -1.44
RNU6-1256P-201ENST00000516539 TTLL13PA6NNM8 815 aa6.04□□□□□ -1.44
RNU6-1256P-201ENST00000516539 GPR37O15354 613 aa6.04□□□□□ -1.44
RNU6-1256P-201ENST00000516539 MAP2K5Q13163 448 aa6.04□□□□□ -1.44
RNU6-1256P-201ENST00000516539 MICALL2Q8IY33 904 aa6.04□□□□□ -1.44
RNU6-1256P-201ENST00000516539 ZMYND15Q9H091 742 aa6.04□□□□□ -1.44
RNU6-1256P-201ENST00000516539 TRPC6Q9Y210 931 aa6.04□□□□□ -1.44
RNU6-1256P-201ENST00000516539 G3V3G9 751 aa6.02□□□□□ -1.45
RNU6-1256P-201ENST00000516539 AMHR2Q16671 573 aa6.01□□□□□ -1.45
RNU6-1256P-201ENST00000516539 CCDC102AQ96A19 550 aa6.01□□□□□ -1.45
RNU6-1256P-201ENST00000516539 TRIM35Q9UPQ4 493 aa6.01□□□□□ -1.45
RNU6-1256P-201ENST00000516539 NUTM2FA1L443 756 aa6□□□□□ -1.45
RNU6-1256P-201ENST00000516539 ZNF316A6NFI3 1004 aaPredicted RBP6□□□□□ -1.45
RNU6-1256P-201ENST00000516539 MAP3K9P80192 1104 aa6□□□□□ -1.45
RNU6-1256P-201ENST00000516539 PLPP6Q8IY26 295 aa6□□□□□ -1.45
RNU6-1256P-201ENST00000516539 BMP2KQ9NSY1 1161 aaPredicted RBP6□□□□□ -1.45
RNU6-1256P-201ENST00000516539 C19orf67A6NJJ6 358 aa5.99□□□□□ -1.45
RNU6-1256P-201ENST00000516539 FCHSD2O94868 740 aa5.99□□□□□ -1.45
RNU6-1256P-201ENST00000516539 CLCN6P51797 869 aa5.99□□□□□ -1.45
RNU6-1256P-201ENST00000516539 FLIIQ13045 1269 aa5.99□□□□□ -1.45
RNU6-1256P-201ENST00000516539 HIC1Q14526 733 aa5.99□□□□□ -1.45
RNU6-1256P-201ENST00000516539 GRXCR2A6NFK2 248 aa5.98□□□□□ -1.45
RNU6-1256P-201ENST00000516539 IRF6O14896 467 aa5.98□□□□□ -1.45
RNU6-1256P-201ENST00000516539 GNPATO15228 680 aa5.98□□□□□ -1.45
RNU6-1256P-201ENST00000516539 FAM117AQ9C073 453 aa5.98□□□□□ -1.45
RNU6-1256P-201ENST00000516539 GOPCQ9HD26 462 aa5.98□□□□□ -1.45
RNU6-1256P-201ENST00000516539 C2orf72A6NCS6 295 aa5.97□□□□□ -1.45
RNU6-1256P-201ENST00000516539 IER5LQ5T953 404 aa5.97□□□□□ -1.45
RNU6-1256P-201ENST00000516539 PARP9Q8IXQ6 854 aa5.97□□□□□ -1.45
RNU6-1256P-201ENST00000516539 PDCD7Q8N8D1 485 aaKnown RBP5.97□□□□□ -1.45
RNU6-1256P-201ENST00000516539 BOLA1Q9Y3E2 137 aa5.97□□□□□ -1.45
RNU6-1256P-201ENST00000516539 KIF3CO14782 793 aa5.96□□□□□ -1.46
RNU6-1256P-201ENST00000516539 PTGER2P43116 358 aa5.96□□□□□ -1.46
RNU6-1256P-201ENST00000516539 TTLL12Q14166 644 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1256P-201ENST00000516539 TMEM121BQ9BXQ6 578 aaPredicted RBP5.96□□□□□ -1.46
RNU6-1256P-201ENST00000516539 PLEKHG3A1L390 1219 aa5.95□□□□□ -1.46
RNU6-1256P-201ENST00000516539 DPY19L2Q6NUT2 758 aa5.95□□□□□ -1.46
RNU6-1256P-201ENST00000516539 TBC1D12O60347 775 aa5.94□□□□□ -1.46
RNU6-1256P-201ENST00000516539 OSBPP22059 807 aa5.94□□□□□ -1.46
RNU6-1256P-201ENST00000516539 OCEL1Q9H607 264 aa5.94□□□□□ -1.46
RNU6-1256P-201ENST00000516539 IRX5P78411 483 aaPredicted RBP5.93□□□□□ -1.46
RNU6-1256P-201ENST00000516539 OXER1Q8TDS5 423 aa5.93□□□□□ -1.46
RNU6-1256P-201ENST00000516539 UPF1Q92900 1129 aaKnown RBP eCLIP5.93□□□□□ -1.46
RNU6-1256P-201ENST00000516539 L3MBTL3Q96JM7 780 aaPredicted RBP5.93□□□□□ -1.46
RNU6-1256P-201ENST00000516539 PLCG2P16885 1265 aa5.92□□□□□ -1.46
RNU6-1256P-201ENST00000516539 UBTFP17480 764 aaKnown RBP5.92□□□□□ -1.46
RNU6-1256P-201ENST00000516539 PCMTD1Q96MG8 357 aaPredicted RBP5.92□□□□□ -1.46
RNU6-1256P-201ENST00000516539 GALR2O43603 387 aaPredicted RBP5.91□□□□□ -1.46
RNU6-1256P-201ENST00000516539 PTGDRQ13258 359 aa5.91□□□□□ -1.46
RNU6-1256P-201ENST00000516539 GIGYF2Q6Y7W6 1299 aaKnown RBP5.91□□□□□ -1.46
RNU6-1256P-201ENST00000516539 PODXL2Q9NZ53 605 aa5.91□□□□□ -1.46
RNU6-1256P-201ENST00000516539 DDX12PQ92771 950 aa5.9□□□□□ -1.46
RNU6-1256P-201ENST00000516539 EVI5O60447 810 aa5.89□□□□□ -1.47
RNU6-1256P-201ENST00000516539 CLCN1P35523 988 aa5.89□□□□□ -1.47
RNU6-1256P-201ENST00000516539 ATN1P54259 1190 aaPredicted RBP5.89□□□□□ -1.47
RNU6-1256P-201ENST00000516539 A6NJR5 290 aa5.88□□□□□ -1.47
RNU6-1256P-201ENST00000516539 ONECUT3O60422 494 aaPredicted RBP5.88□□□□□ -1.47
RNU6-1256P-201ENST00000516539 SH3D19Q5HYK7 790 aa5.88□□□□□ -1.47
RNU6-1256P-201ENST00000516539 ASTLQ6HA08 431 aaPredicted RBP5.88□□□□□ -1.47
RNU6-1256P-201ENST00000516539 ARID3AQ99856 593 aa5.88□□□□□ -1.47
RNU6-1256P-201ENST00000516539 ATMINO43313 823 aaPredicted RBP5.87□□□□□ -1.47
RNU6-1256P-201ENST00000516539 FECHP22830 423 aa5.87□□□□□ -1.47
RNU6-1256P-201ENST00000516539 EPAS1Q99814 870 aa5.87□□□□□ -1.47
RNU6-1256P-201ENST00000516539 APBB1O00213 710 aa5.86□□□□□ -1.47
RNU6-1256P-201ENST00000516539 MS4A1P11836 297 aa5.86□□□□□ -1.47
RNU6-1256P-201ENST00000516539 EN1Q05925 392 aaPredicted RBP5.86□□□□□ -1.47
RNU6-1256P-201ENST00000516539 PTCD2Q8WV60 388 aaKnown RBP5.86□□□□□ -1.47
RNU6-1256P-201ENST00000516539 C1orf115Q9H7X2 142 aa5.86□□□□□ -1.47
RNU6-1256P-201ENST00000516539 GPCPD1Q9NPB8 672 aa5.86□□□□□ -1.47
RNU6-1256P-201ENST00000516539 PHF14O94880 888 aa5.85□□□□□ -1.47
RNU6-1256P-201ENST00000516539 RANGAP1P46060 587 aaPredicted RBP5.85□□□□□ -1.47
RNU6-1256P-201ENST00000516539 MCM6Q14566 821 aa5.84□□□□□ -1.47
RNU6-1256P-201ENST00000516539 ARID3CA6NKF2 412 aa5.83□□□□□ -1.48
RNU6-1256P-201ENST00000516539 MAP3K7O43318 606 aa5.83□□□□□ -1.48
RNU6-1256P-201ENST00000516539 SLC34A2O95436 690 aa5.83□□□□□ -1.48
RNU6-1256P-201ENST00000516539 PRIM1P49642 420 aaKnown RBP5.83□□□□□ -1.48
RNU6-1256P-201ENST00000516539 TMEM92Q6UXU6 159 aa5.83□□□□□ -1.48
RNU6-1256P-201ENST00000516539 TMUB1Q9BVT8 246 aa5.83□□□□□ -1.48
RNU6-1256P-201ENST00000516539 TRAK2O60296 914 aa5.82□□□□□ -1.48
RNU6-1256P-201ENST00000516539 SEC24BO95487 1268 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms