RNA–Protein interactions for RNA: ENST00000512836.5

COL6A5-205, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 3,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-205ENST00000512836 FNBP4Q8N3X1 1017 aaPredicted RBP6.56□□□□□ -1.36
COL6A5-205ENST00000512836 CCDC136Q96JN2 1154 aa6.55□□□□□ -1.36
COL6A5-205ENST00000512836 PLEKHG3A1L390 1219 aa6.55□□□□□ -1.36
COL6A5-205ENST00000512836 SPATA32Q96LK8 384 aa6.55□□□□□ -1.36
COL6A5-205ENST00000512836 FAM117AQ9C073 453 aa6.55□□□□□ -1.36
COL6A5-205ENST00000512836 ZNF777Q9ULD5 760 aaPredicted RBP6.55□□□□□ -1.36
COL6A5-205ENST00000512836 ARHGEF1Q92888 912 aaKnown RBP6.54□□□□□ -1.36
COL6A5-205ENST00000512836 ZNF219Q9P2Y4 722 aaPredicted RBP6.54□□□□□ -1.36
COL6A5-205ENST00000512836 SMARCA5O60264 1052 aaPredicted RBP6.53□□□□□ -1.36
COL6A5-205ENST00000512836 TEX2Q8IWB9 1127 aa6.53□□□□□ -1.36
COL6A5-205ENST00000512836 CIZ1Q9ULV3 898 aaPredicted RBP6.53□□□□□ -1.36
COL6A5-205ENST00000512836 ZC3H4Q9UPT8 1303 aaKnown RBP6.52□□□□□ -1.37
COL6A5-205ENST00000512836 PDE4DQ08499 809 aa6.52□□□□□ -1.37
COL6A5-205ENST00000512836 TRIM41Q8WV44 630 aa6.51□□□□□ -1.37
COL6A5-205ENST00000512836 LOC102724159A0A0B4J2E5 919 aa6.5□□□□□ -1.37
COL6A5-205ENST00000512836 TRIM66O15016 1216 aa6.5□□□□□ -1.37
COL6A5-205ENST00000512836 PWP2Q15269 919 aaKnown RBP6.5□□□□□ -1.37
COL6A5-205ENST00000512836 CCDC97Q96F63 343 aaPredicted RBP6.5□□□□□ -1.37
COL6A5-205ENST00000512836 PROSER2Q86WR7 435 aaPredicted RBP6.5□□□□□ -1.37
COL6A5-205ENST00000512836 ZNF526Q8TF50 670 aaPredicted RBP6.5□□□□□ -1.37
COL6A5-205ENST00000512836 DCAF1Q9Y4B6 1507 aa6.49□□□□□ -1.37
COL6A5-205ENST00000512836 ANKRD13AQ8IZ07 590 aa6.49□□□□□ -1.37
COL6A5-205ENST00000512836 KCNA1Q09470 495 aa6.49□□□□□ -1.37
COL6A5-205ENST00000512836 MCM6Q14566 821 aa6.49□□□□□ -1.37
COL6A5-205ENST00000512836 RIPOR2Q9Y4F9 1068 aa6.49□□□□□ -1.37
COL6A5-205ENST00000512836 A0A0U1RQG5 324 aaPredicted RBP6.48□□□□□ -1.37
COL6A5-205ENST00000512836 PATL2C9JE40 543 aaKnown RBP6.48□□□□□ -1.37
COL6A5-205ENST00000512836 PLSCR2Q9NRY7 297 aa6.48□□□□□ -1.37
COL6A5-205ENST00000512836 PLEKHD1A6NEE1 506 aa6.47□□□□□ -1.37
COL6A5-205ENST00000512836 BRD1O95696 1058 aa6.46□□□□□ -1.37
COL6A5-205ENST00000512836 SIRT1Q96EB6 747 aa6.46□□□□□ -1.37
COL6A5-205ENST00000512836 KIAA1522Q9P206 1035 aaPredicted RBP6.46□□□□□ -1.37
COL6A5-205ENST00000512836 EXOC8Q8IYI6 725 aa6.46□□□□□ -1.38
COL6A5-205ENST00000512836 RBM47A0AV96 593 aaKnown RBP6.45□□□□□ -1.38
COL6A5-205ENST00000512836 NAP1L5Q96NT1 182 aaPredicted RBP6.45□□□□□ -1.38
COL6A5-205ENST00000512836 MAFGO15525 162 aa6.45□□□□□ -1.38
COL6A5-205ENST00000512836 SETQ01105 290 aaPredicted RBP6.45□□□□□ -1.38
COL6A5-205ENST00000512836 POM121Q96HA1 1249 aa6.44□□□□□ -1.38
COL6A5-205ENST00000512836 RIOK3O14730 519 aaKnown RBP6.43□□□□□ -1.38
COL6A5-205ENST00000512836 STK25O00506 426 aa6.43□□□□□ -1.38
COL6A5-205ENST00000512836 ZEB1P37275 1124 aaPredicted RBP6.43□□□□□ -1.38
COL6A5-205ENST00000512836 GOPCQ9HD26 462 aa6.43□□□□□ -1.38
COL6A5-205ENST00000512836 PRDM10Q9NQV6 1147 aa6.43□□□□□ -1.38
COL6A5-205ENST00000512836 RYDENQ9NUL5 291 aaKnown RBP6.43□□□□□ -1.38
COL6A5-205ENST00000512836 NCLP19338 710 aaKnown RBP6.43□□□□□ -1.38
COL6A5-205ENST00000512836 AAMPQ13685 434 aa6.43□□□□□ -1.38
COL6A5-205ENST00000512836 MARCH6O60337 910 aa6.42□□□□□ -1.38
COL6A5-205ENST00000512836 NOL8Q76FK4 1167 aaKnown RBP6.42□□□□□ -1.38
COL6A5-205ENST00000512836 SND1Q7KZF4 910 aaKnown RBP eCLIP6.42□□□□□ -1.38
COL6A5-205ENST00000512836 DRC1Q96MC2 740 aa6.42□□□□□ -1.38
COL6A5-205ENST00000512836 PPP1R15AO75807 674 aaPredicted RBP6.42□□□□□ -1.38
COL6A5-205ENST00000512836 PLCD3Q8N3E9 789 aa6.42□□□□□ -1.38
COL6A5-205ENST00000512836 DDRGK1Q96HY6 314 aa6.41□□□□□ -1.38
COL6A5-205ENST00000512836 PLCD4Q9BRC7 762 aa6.4□□□□□ -1.38
COL6A5-205ENST00000512836 SUGT1Q9Y2Z0 365 aa6.4□□□□□ -1.38
COL6A5-205ENST00000512836 HIRIP3Q9BW71 556 aaPredicted RBP6.4□□□□□ -1.39
COL6A5-205ENST00000512836 PPME1Q9Y570 386 aa6.4□□□□□ -1.39
COL6A5-205ENST00000512836 SLC52A1Q9NWF4 448 aa6.39□□□□□ -1.39
COL6A5-205ENST00000512836 ANAPC15P60006 121 aa6.39□□□□□ -1.39
COL6A5-205ENST00000512836 TXNDC2Q86VQ3 553 aa6.39□□□□□ -1.39
COL6A5-205ENST00000512836 STAG3Q9UJ98 1225 aa6.39□□□□□ -1.39
COL6A5-205ENST00000512836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.39□□□□□ -1.39
COL6A5-205ENST00000512836 HNRNPUL2Q1KMD3 747 aaKnown RBP6.39□□□□□ -1.39
COL6A5-205ENST00000512836 SREK1Q8WXA9 508 aaKnown RBP6.39□□□□□ -1.39
COL6A5-205ENST00000512836 C8orf37Q96NL8 207 aa6.39□□□□□ -1.39
COL6A5-205ENST00000512836 ANKRD62A6NC57 917 aa6.38□□□□□ -1.39
COL6A5-205ENST00000512836 KRI1Q8N9T8 703 aaKnown RBP6.38□□□□□ -1.39
COL6A5-205ENST00000512836 HSP90AB4PQ58FF6 505 aa6.38□□□□□ -1.39
COL6A5-205ENST00000512836 MRRFQ96E11 262 aaKnown RBP6.38□□□□□ -1.39
COL6A5-205ENST00000512836 MYO15BQ96JP2 1530 aa6.38□□□□□ -1.39
COL6A5-205ENST00000512836 E2F4Q16254 413 aa6.37□□□□□ -1.39
COL6A5-205ENST00000512836 SMYD5Q6GMV2 418 aa6.37□□□□□ -1.39
COL6A5-205ENST00000512836 SGSM3Q96HU1 749 aa6.37□□□□□ -1.39
COL6A5-205ENST00000512836 IVNS1ABPQ9Y6Y0 642 aa6.36□□□□□ -1.39
COL6A5-205ENST00000512836 ZNF662Q6ZS27 426 aa6.36□□□□□ -1.39
COL6A5-205ENST00000512836 MYH16Q9H6N6 1097 aa6.35□□□□□ -1.39
COL6A5-205ENST00000512836 TPD52L2O43399 206 aaKnown RBP6.35□□□□□ -1.39
COL6A5-205ENST00000512836 CENPBP07199 599 aaPredicted RBP6.35□□□□□ -1.39
COL6A5-205ENST00000512836 RBM26Q5T8P6 1007 aaKnown RBP6.35□□□□□ -1.39
COL6A5-205ENST00000512836 CNPY4Q8N129 248 aa6.35□□□□□ -1.39
COL6A5-205ENST00000512836 GRIPAP1Q4V328 841 aa6.34□□□□□ -1.39
COL6A5-205ENST00000512836 GIMAP6Q6P9H5 292 aa6.34□□□□□ -1.39
COL6A5-205ENST00000512836 VGFO15240 615 aaPredicted RBP6.34□□□□□ -1.39
COL6A5-205ENST00000512836 GPIHBP1Q8IV16 184 aa6.34□□□□□ -1.39
COL6A5-205ENST00000512836 SGIP1Q9BQI5 828 aa6.34□□□□□ -1.39
COL6A5-205ENST00000512836 MICAL1Q8TDZ2 1067 aa6.34□□□□□ -1.4
COL6A5-205ENST00000512836 CHRM1P11229 460 aaPredicted RBP6.33□□□□□ -1.4
COL6A5-205ENST00000512836 MIER1Q8N108 512 aa6.33□□□□□ -1.4
COL6A5-205ENST00000512836 MYT1LQ9UL68 1186 aa6.33□□□□□ -1.4
COL6A5-205ENST00000512836 SKIV2LQ15477 1246 aaKnown RBP6.33□□□□□ -1.4
COL6A5-205ENST00000512836 DNAJC2Q99543 621 aaKnown RBP6.33□□□□□ -1.4
COL6A5-205ENST00000512836 USTQ9Y2C2 406 aa6.33□□□□□ -1.4
COL6A5-205ENST00000512836 LAS1LQ9Y4W2 734 aaKnown RBP6.33□□□□□ -1.4
COL6A5-205ENST00000512836 TCF3P15923 654 aa6.32□□□□□ -1.4
COL6A5-205ENST00000512836 TSR1Q2NL82 804 aaKnown RBP6.32□□□□□ -1.4
COL6A5-205ENST00000512836 TMTC2Q8N394 836 aa6.32□□□□□ -1.4
COL6A5-205ENST00000512836 RBM27Q9P2N5 1060 aaKnown RBP6.32□□□□□ -1.4
COL6A5-205ENST00000512836 ACIN1Q9UKV3 1341 aaKnown RBP6.32□□□□□ -1.4
COL6A5-205ENST00000512836 SPTY2D1Q68D10 685 aaPredicted RBP6.32□□□□□ -1.4
COL6A5-205ENST00000512836 UBXN4Q92575 508 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms