RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 PREX2Q70Z35 1606 aa16.72■□□□□ 0.27
PFDN1-203ENST00000510217 CDC42BPBQ9Y5S2 1711 aa16.72■□□□□ 0.27
PFDN1-203ENST00000510217 POGZQ7Z3K3 1410 aa16.71■□□□□ 0.27
PFDN1-203ENST00000510217 ADAMTSL3P82987 1691 aa16.7■□□□□ 0.26
PFDN1-203ENST00000510217 BCORL1Q5H9F3 1711 aa16.7■□□□□ 0.26
PFDN1-203ENST00000510217 ARHGAP5Q13017 1502 aa16.7■□□□□ 0.26
PFDN1-203ENST00000510217 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
PFDN1-203ENST00000510217 SIGLEC1Q9BZZ2 1709 aa16.69■□□□□ 0.26
PFDN1-203ENST00000510217 ZFYVE16Q7Z3T8 1539 aa16.69■□□□□ 0.26
PFDN1-203ENST00000510217 CDC42BPAQ5VT25 1732 aa16.68■□□□□ 0.26
PFDN1-203ENST00000510217 SCAPERQ9BY12 1400 aa16.68■□□□□ 0.26
PFDN1-203ENST00000510217 YEATS2Q9ULM3 1422 aa16.66■□□□□ 0.26
PFDN1-203ENST00000510217 MAGI2Q86UL8 1455 aa16.66■□□□□ 0.26
PFDN1-203ENST00000510217 KDM5CP41229 1560 aa16.65■□□□□ 0.26
PFDN1-203ENST00000510217 ABCC1P33527 1531 aa16.65■□□□□ 0.26
PFDN1-203ENST00000510217 MADDQ8WXG6 1647 aa16.64■□□□□ 0.25
PFDN1-203ENST00000510217 ITSN2Q9NZM3 1697 aa16.63■□□□□ 0.25
PFDN1-203ENST00000510217 EFCAB2Q5VUJ9 269 aa16.63■□□□□ 0.25
PFDN1-203ENST00000510217 ZNF518AQ6AHZ1 1483 aa16.62■□□□□ 0.25
PFDN1-203ENST00000510217 HECW2Q9P2P5 1572 aa16.61■□□□□ 0.25
PFDN1-203ENST00000510217 PTPRMP28827 1452 aa16.59■□□□□ 0.25
PFDN1-203ENST00000510217 EHBP1L1Q8N3D4 1523 aa16.59■□□□□ 0.25
PFDN1-203ENST00000510217 ARHGEF12Q9NZN5 1544 aa16.59■□□□□ 0.25
PFDN1-203ENST00000510217 SAMD9LQ8IVG5 1584 aa16.59■□□□□ 0.25
PFDN1-203ENST00000510217 RIMS1Q86UR5 1692 aaKnown RBP16.59■□□□□ 0.25
PFDN1-203ENST00000510217 ABCA6Q8N139 1617 aa16.57■□□□□ 0.24
PFDN1-203ENST00000510217 DIP2CQ9Y2E4 1556 aa16.57■□□□□ 0.24
PFDN1-203ENST00000510217 GPATCH8Q9UKJ3 1502 aaKnown RBP16.57■□□□□ 0.24
PFDN1-203ENST00000510217 C9orf84Q5VXU9 1444 aa16.56■□□□□ 0.24
PFDN1-203ENST00000510217 ARID4BQ4LE39 1312 aaPredicted RBP16.56■□□□□ 0.24
PFDN1-203ENST00000510217 TIAM1Q13009 1591 aa16.55■□□□□ 0.24
PFDN1-203ENST00000510217 ATP10AO60312 1499 aa16.55■□□□□ 0.24
PFDN1-203ENST00000510217 SYCP2Q9BX26 1530 aa16.55■□□□□ 0.24
PFDN1-203ENST00000510217 TRAPPC8Q9Y2L5 1435 aa16.54■□□□□ 0.24
PFDN1-203ENST00000510217 FER1L4A9Z1Z3 1794 aa16.54■□□□□ 0.24
PFDN1-203ENST00000510217 MTUS2Q5JR59 1369 aa16.54■□□□□ 0.24
PFDN1-203ENST00000510217 REREQ9P2R6 1566 aa16.54■□□□□ 0.24
PFDN1-203ENST00000510217 MLH3Q9UHC1 1453 aa16.53■□□□□ 0.24
PFDN1-203ENST00000510217 KIDINS220Q9ULH0 1771 aa16.52■□□□□ 0.24
PFDN1-203ENST00000510217 LOC105371045A0A1W2PR82 267 aa16.52■□□□□ 0.24
PFDN1-203ENST00000510217 AFAP1Q8N556 730 aa16.52■□□□□ 0.24
PFDN1-203ENST00000510217 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
PFDN1-203ENST00000510217 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
PFDN1-203ENST00000510217 SUPT6HQ7KZ85 1726 aaKnown RBP16.48■□□□□ 0.23
PFDN1-203ENST00000510217 INO80Q9ULG1 1556 aaPredicted RBP16.47■□□□□ 0.23
PFDN1-203ENST00000510217 PLEKHH2Q8IVE3 1493 aa16.47■□□□□ 0.23
PFDN1-203ENST00000510217 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
PFDN1-203ENST00000510217 AGLP35573 1532 aa16.45■□□□□ 0.22
PFDN1-203ENST00000510217 ZNF777Q9ULD5 760 aaPredicted RBP16.45■□□□□ 0.22
PFDN1-203ENST00000510217 ATP7AQ04656 1500 aa16.45■□□□□ 0.22
PFDN1-203ENST00000510217 NCOA2Q15596 1464 aa16.44■□□□□ 0.22
PFDN1-203ENST00000510217 LMTK3Q96Q04 1460 aa16.43■□□□□ 0.22
PFDN1-203ENST00000510217 MLECQ14165 292 aa16.43■□□□□ 0.22
PFDN1-203ENST00000510217 CFDP1Q9UEE9 299 aaPredicted RBP16.43■□□□□ 0.22
PFDN1-203ENST00000510217 PLXNC1O60486 1568 aa16.42■□□□□ 0.22
PFDN1-203ENST00000510217 LRRC9Q6ZRR7 1453 aa16.42■□□□□ 0.22
PFDN1-203ENST00000510217 MAP3K1Q13233 1512 aa16.41■□□□□ 0.22
PFDN1-203ENST00000510217 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
PFDN1-203ENST00000510217 HNRNPMP52272 730 aaKnown RBP eCLIP16.4■□□□□ 0.22
PFDN1-203ENST00000510217 MBD5Q9P267 1494 aa16.4■□□□□ 0.22
PFDN1-203ENST00000510217 CAMSAP2Q08AD1 1489 aa16.39■□□□□ 0.21
PFDN1-203ENST00000510217 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
PFDN1-203ENST00000510217 ADGBQ8N7X0 1667 aa16.37■□□□□ 0.21
PFDN1-203ENST00000510217 SPAG9O60271 1321 aaKnown RBP16.37■□□□□ 0.21
PFDN1-203ENST00000510217 C3P01024 1663 aa16.37■□□□□ 0.21
PFDN1-203ENST00000510217 PREX1Q8TCU6 1659 aa16.36■□□□□ 0.21
PFDN1-203ENST00000510217 A2MP01023 1474 aa16.34■□□□□ 0.21
PFDN1-203ENST00000510217 CCDC141Q6ZP82 1450 aa16.34■□□□□ 0.21
PFDN1-203ENST00000510217 ARHGEF5Q12774 1597 aa16.33■□□□□ 0.2
PFDN1-203ENST00000510217 MROH2AA6NES4 1674 aa16.33■□□□□ 0.2
PFDN1-203ENST00000510217 RTEL1-TNFRSF6BF6WH68 1400 aa16.31■□□□□ 0.2
PFDN1-203ENST00000510217 KANK4Q5T7N3 995 aaPredicted RBP16.31■□□□□ 0.2
PFDN1-203ENST00000510217 CEBPAP49715 358 aaPredicted RBP16.29■□□□□ 0.2
PFDN1-203ENST00000510217 CLTCQ00610 1675 aaKnown RBP16.29■□□□□ 0.2
PFDN1-203ENST00000510217 MYOM3Q5VTT5 1437 aa16.28■□□□□ 0.2
PFDN1-203ENST00000510217 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
PFDN1-203ENST00000510217 MAST1Q9Y2H9 1570 aa16.26■□□□□ 0.19
PFDN1-203ENST00000510217 MIA2Q96PC5 1412 aa16.26■□□□□ 0.19
PFDN1-203ENST00000510217 HSPA2P54652 639 aa16.25■□□□□ 0.19
PFDN1-203ENST00000510217 UHRF1BP1Q6BDS2 1440 aa16.24■□□□□ 0.19
PFDN1-203ENST00000510217 CROCC2H7BZ55 1655 aa16.24■□□□□ 0.19
PFDN1-203ENST00000510217 SETD1BQ9UPS6 1966 aaKnown RBP16.22■□□□□ 0.19
PFDN1-203ENST00000510217 DHX29Q7Z478 1369 aaKnown RBP16.22■□□□□ 0.19
PFDN1-203ENST00000510217 PTPN23Q9H3S7 1636 aa16.21■□□□□ 0.19
PFDN1-203ENST00000510217 RSPH4AQ5TD94 716 aa16.21■□□□□ 0.19
PFDN1-203ENST00000510217 ESF1Q9H501 851 aaKnown RBP16.21■□□□□ 0.19
PFDN1-203ENST00000510217 STRCQ7RTU9 1775 aa16.21■□□□□ 0.18
PFDN1-203ENST00000510217 NPATQ14207 1427 aa16.2■□□□□ 0.18
PFDN1-203ENST00000510217 MYO3AQ8NEV4 1616 aa16.19■□□□□ 0.18
PFDN1-203ENST00000510217 ZNF142P52746 1687 aaPredicted RBP16.19■□□□□ 0.18
PFDN1-203ENST00000510217 ZMYM3Q14202 1370 aa16.19■□□□□ 0.18
PFDN1-203ENST00000510217 RNF17Q9BXT8 1623 aaKnown RBP16.19■□□□□ 0.18
PFDN1-203ENST00000510217 FAM135AQ9P2D6 1515 aa16.19■□□□□ 0.18
PFDN1-203ENST00000510217 KDM5DQ9BY66 1539 aa16.18■□□□□ 0.18
PFDN1-203ENST00000510217 EIF2AK4Q9P2K8 1649 aaKnown RBP16.17■□□□□ 0.18
PFDN1-203ENST00000510217 GGT6Q6P531 493 aa16.17■□□□□ 0.18
PFDN1-203ENST00000510217 PTPRKQ15262 1439 aa16.17■□□□□ 0.18
PFDN1-203ENST00000510217 TCOF1Q13428 1488 aaKnown RBP16.16■□□□□ 0.18
PFDN1-203ENST00000510217 SHANK2Q9UPX8 1470 aa16.16■□□□□ 0.18
PFDN1-203ENST00000510217 DNMT1P26358 1616 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms