RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 GPATCH8Q9UKJ3 1502 aaKnown RBP25.37■■□□□ 1.65
SCAMP1-203ENST00000510030 TCOF1Q13428 1488 aaKnown RBP25.37■■□□□ 1.65
SCAMP1-203ENST00000510030 ARAP3Q8WWN8 1544 aa25.36■■□□□ 1.65
SCAMP1-203ENST00000510030 ABCA9Q8IUA7 1624 aa25.35■■□□□ 1.65
SCAMP1-203ENST00000510030 TTC37Q6PGP7 1564 aa25.35■■□□□ 1.65
SCAMP1-203ENST00000510030 GLI2P10070 1586 aa25.34■■□□□ 1.65
SCAMP1-203ENST00000510030 KDM4FA0A1W2PPD8 638 aa25.31■■□□□ 1.64
SCAMP1-203ENST00000510030 CFDP1Q9UEE9 299 aaPredicted RBP25.31■■□□□ 1.64
SCAMP1-203ENST00000510030 KCNH8Q96L42 1107 aa25.3■■□□□ 1.64
SCAMP1-203ENST00000510030 COL17A1Q9UMD9 1497 aaPredicted RBP25.29■■□□□ 1.64
SCAMP1-203ENST00000510030 FAM50AQ14320 339 aaKnown RBP25.28■■□□□ 1.64
SCAMP1-203ENST00000510030 MAP3K4Q9Y6R4 1608 aa25.27■■□□□ 1.64
SCAMP1-203ENST00000510030 CDC42BPBQ9Y5S2 1711 aa25.27■■□□□ 1.64
SCAMP1-203ENST00000510030 PLEKHH2Q8IVE3 1493 aa25.27■■□□□ 1.64
SCAMP1-203ENST00000510030 PLCH2O75038 1416 aa25.26■■□□□ 1.63
SCAMP1-203ENST00000510030 ARHGAP5Q13017 1502 aa25.26■■□□□ 1.63
SCAMP1-203ENST00000510030 CAMSAP2Q08AD1 1489 aa25.25■■□□□ 1.63
SCAMP1-203ENST00000510030 CFAP74Q9C0B2 1584 aa25.23■■□□□ 1.63
SCAMP1-203ENST00000510030 DNMT1P26358 1616 aaKnown RBP25.2■■□□□ 1.62
SCAMP1-203ENST00000510030 EFCAB2Q5VUJ9 269 aa25.18■■□□□ 1.62
SCAMP1-203ENST00000510030 ARHGEF5Q12774 1597 aa25.17■■□□□ 1.62
SCAMP1-203ENST00000510030 RSPH4AQ5TD94 716 aa25.16■■□□□ 1.62
SCAMP1-203ENST00000510030 KIAA1107Q9UPP5 1409 aa25.16■■□□□ 1.62
SCAMP1-203ENST00000510030 SAMD9LQ8IVG5 1584 aa25.15■■□□□ 1.62
SCAMP1-203ENST00000510030 CD109Q6YHK3 1445 aa25.14■■□□□ 1.62
SCAMP1-203ENST00000510030 ZNF777Q9ULD5 760 aaPredicted RBP25.13■■□□□ 1.61
SCAMP1-203ENST00000510030 CROCC2H7BZ55 1655 aa25.13■■□□□ 1.61
SCAMP1-203ENST00000510030 FANCAO15360 1455 aa25.12■■□□□ 1.61
SCAMP1-203ENST00000510030 SHANK2Q9UPX8 1470 aa25.12■■□□□ 1.61
SCAMP1-203ENST00000510030 DAPK1P53355 1430 aa25.12■■□□□ 1.61
SCAMP1-203ENST00000510030 AKNAQ7Z591 1439 aa25.11■■□□□ 1.61
SCAMP1-203ENST00000510030 TEX14Q8IWB6 1497 aa25.09■■□□□ 1.61
SCAMP1-203ENST00000510030 ABCC1P33527 1531 aa25.09■■□□□ 1.61
SCAMP1-203ENST00000510030 ADGRL1O94910 1474 aa25.09■■□□□ 1.61
SCAMP1-203ENST00000510030 CCDC141Q6ZP82 1450 aa25.08■■□□□ 1.6
SCAMP1-203ENST00000510030 NEO1Q92859 1461 aa25.08■■□□□ 1.6
SCAMP1-203ENST00000510030 ADGBQ8N7X0 1667 aa25.07■■□□□ 1.6
SCAMP1-203ENST00000510030 ITGAEP38570 1179 aa25.07■■□□□ 1.6
SCAMP1-203ENST00000510030 ZNF644Q9H582 1327 aaPredicted RBP25.06■■□□□ 1.6
SCAMP1-203ENST00000510030 SYCP2Q9BX26 1530 aa25.06■■□□□ 1.6
SCAMP1-203ENST00000510030 ROCK1Q13464 1354 aa25.05■■□□□ 1.6
SCAMP1-203ENST00000510030 ABCC5O15440 1437 aa25.05■■□□□ 1.6
SCAMP1-203ENST00000510030 ACIN1Q9UKV3 1341 aaKnown RBP25.04■■□□□ 1.6
SCAMP1-203ENST00000510030 MBD5Q9P267 1494 aa25.03■■□□□ 1.6
SCAMP1-203ENST00000510030 HFM1A2PYH4 1435 aa25.02■■□□□ 1.6
SCAMP1-203ENST00000510030 MAST1Q9Y2H9 1570 aa25.01■■□□□ 1.59
SCAMP1-203ENST00000510030 TSPY4P0CV99 314 aa25.01■■□□□ 1.59
SCAMP1-203ENST00000510030 TSPY10P0CW01 314 aa25.01■■□□□ 1.59
SCAMP1-203ENST00000510030 ADGRL2O95490 1459 aa25.01■■□□□ 1.59
SCAMP1-203ENST00000510030 GCC2Q8IWJ2 1684 aa25.01■■□□□ 1.59
SCAMP1-203ENST00000510030 SETD5Q9C0A6 1442 aa24.98■■□□□ 1.59
SCAMP1-203ENST00000510030 PTPRKQ15262 1439 aa24.97■■□□□ 1.59
SCAMP1-203ENST00000510030 C9orf84Q5VXU9 1444 aa24.97■■□□□ 1.59
SCAMP1-203ENST00000510030 ANKRD30AQ9BXX3 1397 aa24.97■■□□□ 1.59
SCAMP1-203ENST00000510030 HRCP23327 699 aa24.95■■□□□ 1.58
SCAMP1-203ENST00000510030 HNRNPMP52272 730 aaKnown RBP eCLIP24.94■■□□□ 1.58
SCAMP1-203ENST00000510030 ZNF518AQ6AHZ1 1483 aa24.94■■□□□ 1.58
SCAMP1-203ENST00000510030 PLXNC1O60486 1568 aa24.93■■□□□ 1.58
SCAMP1-203ENST00000510030 SCAPERQ9BY12 1400 aa24.92■■□□□ 1.58
SCAMP1-203ENST00000510030 RTEL1-TNFRSF6BF6WH68 1400 aa24.91■■□□□ 1.58
SCAMP1-203ENST00000510030 NAIPQ13075 1403 aa24.91■■□□□ 1.58
SCAMP1-203ENST00000510030 ARHGEF12Q9NZN5 1544 aa24.91■■□□□ 1.58
SCAMP1-203ENST00000510030 NCOA1Q15788 1441 aa24.9■■□□□ 1.58
SCAMP1-203ENST00000510030 POGZQ7Z3K3 1410 aa24.87■■□□□ 1.57
SCAMP1-203ENST00000510030 CHIC2Q9UKJ5 165 aa24.87■■□□□ 1.57
SCAMP1-203ENST00000510030 RAB3GAP2Q9H2M9 1393 aa24.87■■□□□ 1.57
SCAMP1-203ENST00000510030 DENND4BO75064 1496 aaPredicted RBP24.86■■□□□ 1.57
SCAMP1-203ENST00000510030 TRAPPC8Q9Y2L5 1435 aa24.86■■□□□ 1.57
SCAMP1-203ENST00000510030 KDM5CP41229 1560 aa24.85■■□□□ 1.57
SCAMP1-203ENST00000510030 INO80Q9ULG1 1556 aaPredicted RBP24.84■■□□□ 1.57
SCAMP1-203ENST00000510030 SPAG9O60271 1321 aaKnown RBP24.84■■□□□ 1.57
SCAMP1-203ENST00000510030 ZFYVE16Q7Z3T8 1539 aa24.83■■□□□ 1.57
SCAMP1-203ENST00000510030 ATP7AQ04656 1500 aa24.82■■□□□ 1.56
SCAMP1-203ENST00000510030 KIF15Q9NS87 1388 aa24.8■■□□□ 1.56
SCAMP1-203ENST00000510030 HECW2Q9P2P5 1572 aa24.8■■□□□ 1.56
SCAMP1-203ENST00000510030 RRP7BPQ9NSQ0 103 aa24.8■■□□□ 1.56
SCAMP1-203ENST00000510030 DUOX2Q9NRD8 1548 aa24.8■■□□□ 1.56
SCAMP1-203ENST00000510030 RICTORQ6R327 1708 aa24.79■■□□□ 1.56
SCAMP1-203ENST00000510030 MLH3Q9UHC1 1453 aa24.78■■□□□ 1.56
SCAMP1-203ENST00000510030 RAPGEF3O95398 923 aa24.78■■□□□ 1.56
SCAMP1-203ENST00000510030 ANKRD50Q9ULJ7 1429 aa24.78■■□□□ 1.56
SCAMP1-203ENST00000510030 ERBINQ96RT1 1412 aa24.76■■□□□ 1.55
SCAMP1-203ENST00000510030 ZMYM4Q5VZL5 1548 aa24.76■■□□□ 1.55
SCAMP1-203ENST00000510030 FRMPD1Q5SYB0 1578 aa24.75■■□□□ 1.55
SCAMP1-203ENST00000510030 AFAP1Q8N556 730 aa24.74■■□□□ 1.55
SCAMP1-203ENST00000510030 MAGI2Q86UL8 1455 aa24.73■■□□□ 1.55
SCAMP1-203ENST00000510030 CLSPNQ9HAW4 1339 aa24.72■■□□□ 1.55
SCAMP1-203ENST00000510030 CCER1Q8TC90 406 aaPredicted RBP24.72■■□□□ 1.55
SCAMP1-203ENST00000510030 KIDINS220Q9ULH0 1771 aa24.72■■□□□ 1.55
SCAMP1-203ENST00000510030 EIF2AK4Q9P2K8 1649 aaKnown RBP24.69■■□□□ 1.54
SCAMP1-203ENST00000510030 MYT1LQ9UL68 1186 aa24.69■■□□□ 1.54
SCAMP1-203ENST00000510030 DHX57Q6P158 1386 aaKnown RBP24.65■■□□□ 1.54
SCAMP1-203ENST00000510030 ZEB1P37275 1124 aaPredicted RBP24.63■■□□□ 1.53
SCAMP1-203ENST00000510030 UNC13BO14795 1591 aa24.63■■□□□ 1.53
SCAMP1-203ENST00000510030 KDM5DQ9BY66 1539 aa24.62■■□□□ 1.53
SCAMP1-203ENST00000510030 DHX29Q7Z478 1369 aaKnown RBP24.61■■□□□ 1.53
SCAMP1-203ENST00000510030 ABCA6Q8N139 1617 aa24.61■■□□□ 1.53
SCAMP1-203ENST00000510030 A2MP01023 1474 aa24.6■■□□□ 1.53
SCAMP1-203ENST00000510030 DIP2CQ9Y2E4 1556 aa24.59■■□□□ 1.53
SCAMP1-203ENST00000510030 BCORL1Q5H9F3 1711 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms