RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 MAP3K4Q9Y6R4 1608 aa21.94■■□□□ 1.1
SPOCK1-206ENST00000509293 TCOF1Q13428 1488 aaKnown RBP21.91■■□□□ 1.1
SPOCK1-206ENST00000509293 CDC42BPBQ9Y5S2 1711 aa21.91■■□□□ 1.1
SPOCK1-206ENST00000509293 EFCAB2Q5VUJ9 269 aa21.9■■□□□ 1.1
SPOCK1-206ENST00000509293 KIF13AQ9H1H9 1805 aa21.9■■□□□ 1.1
SPOCK1-206ENST00000509293 ARHGAP5Q13017 1502 aa21.89■■□□□ 1.09
SPOCK1-206ENST00000509293 PTPN23Q9H3S7 1636 aa21.88■■□□□ 1.09
SPOCK1-206ENST00000509293 TRIM26Q12899 539 aaPredicted RBP21.87■■□□□ 1.09
SPOCK1-206ENST00000509293 PLEKHH2Q8IVE3 1493 aa21.86■■□□□ 1.09
SPOCK1-206ENST00000509293 FANCAO15360 1455 aa21.85■■□□□ 1.09
SPOCK1-206ENST00000509293 NEO1Q92859 1461 aa21.84■■□□□ 1.09
SPOCK1-206ENST00000509293 KIAA1107Q9UPP5 1409 aa21.84■■□□□ 1.09
SPOCK1-206ENST00000509293 CAMSAP2Q08AD1 1489 aa21.83■■□□□ 1.09
SPOCK1-206ENST00000509293 CFAP74Q9C0B2 1584 aa21.83■■□□□ 1.09
SPOCK1-206ENST00000509293 TEX14Q8IWB6 1497 aa21.83■■□□□ 1.08
SPOCK1-206ENST00000509293 SAMD9LQ8IVG5 1584 aa21.81■■□□□ 1.08
SPOCK1-206ENST00000509293 ZNF644Q9H582 1327 aaPredicted RBP21.8■■□□□ 1.08
SPOCK1-206ENST00000509293 FAM50AQ14320 339 aaKnown RBP21.8■■□□□ 1.08
SPOCK1-206ENST00000509293 RSPH4AQ5TD94 716 aa21.8■■□□□ 1.08
SPOCK1-206ENST00000509293 ZNF777Q9ULD5 760 aaPredicted RBP21.8■■□□□ 1.08
SPOCK1-206ENST00000509293 AKNAQ7Z591 1439 aa21.79■■□□□ 1.08
SPOCK1-206ENST00000509293 PPRC1Q5VV67 1664 aaKnown RBP21.79■■□□□ 1.08
SPOCK1-206ENST00000509293 ABCC1P33527 1531 aa21.78■■□□□ 1.08
SPOCK1-206ENST00000509293 TRHP20396 242 aaPredicted RBP21.77■■□□□ 1.08
SPOCK1-206ENST00000509293 MBD5Q9P267 1494 aa21.77■■□□□ 1.07
SPOCK1-206ENST00000509293 ARHGEF5Q12774 1597 aa21.76■■□□□ 1.07
SPOCK1-206ENST00000509293 ADGRL1O94910 1474 aa21.75■■□□□ 1.07
SPOCK1-206ENST00000509293 SYCP2Q9BX26 1530 aa21.73■■□□□ 1.07
SPOCK1-206ENST00000509293 DNMT1P26358 1616 aaKnown RBP21.73■■□□□ 1.07
SPOCK1-206ENST00000509293 ARHGEF12Q9NZN5 1544 aa21.72■■□□□ 1.07
SPOCK1-206ENST00000509293 SCAPERQ9BY12 1400 aa21.72■■□□□ 1.07
SPOCK1-206ENST00000509293 TSPOAP1O95153 1857 aa21.71■■□□□ 1.07
SPOCK1-206ENST00000509293 HNRNPMP52272 730 aaKnown RBP eCLIP21.71■■□□□ 1.07
SPOCK1-206ENST00000509293 ABCC5O15440 1437 aa21.71■■□□□ 1.07
SPOCK1-206ENST00000509293 DAPK1P53355 1430 aa21.71■■□□□ 1.07
SPOCK1-206ENST00000509293 CCDC141Q6ZP82 1450 aa21.71■■□□□ 1.07
SPOCK1-206ENST00000509293 SHANK2Q9UPX8 1470 aa21.69■■□□□ 1.06
SPOCK1-206ENST00000509293 DENND4BO75064 1496 aaPredicted RBP21.66■■□□□ 1.06
SPOCK1-206ENST00000509293 ZNF518AQ6AHZ1 1483 aa21.66■■□□□ 1.06
SPOCK1-206ENST00000509293 POGZQ7Z3K3 1410 aa21.66■■□□□ 1.06
SPOCK1-206ENST00000509293 TRAPPC8Q9Y2L5 1435 aa21.66■■□□□ 1.06
SPOCK1-206ENST00000509293 TSPY4P0CV99 314 aa21.65■■□□□ 1.06
SPOCK1-206ENST00000509293 TSPY10P0CW01 314 aa21.65■■□□□ 1.06
SPOCK1-206ENST00000509293 PTPRKQ15262 1439 aa21.64■■□□□ 1.06
SPOCK1-206ENST00000509293 ROCK1Q13464 1354 aa21.63■■□□□ 1.05
SPOCK1-206ENST00000509293 CROCC2H7BZ55 1655 aa21.63■■□□□ 1.05
SPOCK1-206ENST00000509293 MAST1Q9Y2H9 1570 aa21.63■■□□□ 1.05
SPOCK1-206ENST00000509293 RTEL1-TNFRSF6BF6WH68 1400 aa21.62■■□□□ 1.05
SPOCK1-206ENST00000509293 C9orf84Q5VXU9 1444 aa21.62■■□□□ 1.05
SPOCK1-206ENST00000509293 KDM5CP41229 1560 aa21.61■■□□□ 1.05
SPOCK1-206ENST00000509293 ADGRL2O95490 1459 aa21.61■■□□□ 1.05
SPOCK1-206ENST00000509293 AFAP1Q8N556 730 aa21.61■■□□□ 1.05
SPOCK1-206ENST00000509293 ITGAEP38570 1179 aa21.6■■□□□ 1.05
SPOCK1-206ENST00000509293 PCGF6Q9BYE7 350 aa21.6■■□□□ 1.05
SPOCK1-206ENST00000509293 SPAG9O60271 1321 aaKnown RBP21.58■■□□□ 1.05
SPOCK1-206ENST00000509293 MLH3Q9UHC1 1453 aa21.58■■□□□ 1.04
SPOCK1-206ENST00000509293 RICTORQ6R327 1708 aa21.58■■□□□ 1.04
SPOCK1-206ENST00000509293 ANKRD30AQ9BXX3 1397 aa21.57■■□□□ 1.04
SPOCK1-206ENST00000509293 NCOA1Q15788 1441 aa21.56■■□□□ 1.04
SPOCK1-206ENST00000509293 RAPGEF3O95398 923 aa21.56■■□□□ 1.04
SPOCK1-206ENST00000509293 COL17A1Q9UMD9 1497 aaPredicted RBP21.56■■□□□ 1.04
SPOCK1-206ENST00000509293 ZMYM4Q5VZL5 1548 aa21.55■■□□□ 1.04
SPOCK1-206ENST00000509293 FRMPD1Q5SYB0 1578 aa21.55■■□□□ 1.04
SPOCK1-206ENST00000509293 HFM1A2PYH4 1435 aa21.55■■□□□ 1.04
SPOCK1-206ENST00000509293 ADGBQ8N7X0 1667 aa21.54■■□□□ 1.04
SPOCK1-206ENST00000509293 INO80Q9ULG1 1556 aaPredicted RBP21.54■■□□□ 1.04
SPOCK1-206ENST00000509293 MAGI2Q86UL8 1455 aa21.54■■□□□ 1.04
SPOCK1-206ENST00000509293 CHIC2Q9UKJ5 165 aa21.54■■□□□ 1.04
SPOCK1-206ENST00000509293 ZFYVE16Q7Z3T8 1539 aa21.54■■□□□ 1.04
SPOCK1-206ENST00000509293 PLXNC1O60486 1568 aa21.53■■□□□ 1.04
SPOCK1-206ENST00000509293 ATP7AQ04656 1500 aa21.53■■□□□ 1.04
SPOCK1-206ENST00000509293 HECW2Q9P2P5 1572 aa21.51■■□□□ 1.03
SPOCK1-206ENST00000509293 NAIPQ13075 1403 aa21.49■■□□□ 1.03
SPOCK1-206ENST00000509293 KIDINS220Q9ULH0 1771 aa21.48■■□□□ 1.03
SPOCK1-206ENST00000509293 KDM6BO15054 1643 aa21.48■■□□□ 1.03
SPOCK1-206ENST00000509293 KIF15Q9NS87 1388 aa21.48■■□□□ 1.03
SPOCK1-206ENST00000509293 SETD5Q9C0A6 1442 aa21.47■■□□□ 1.03
SPOCK1-206ENST00000509293 HRCP23327 699 aa21.47■■□□□ 1.03
SPOCK1-206ENST00000509293 RRP7BPQ9NSQ0 103 aa21.47■■□□□ 1.03
SPOCK1-206ENST00000509293 DUOX2Q9NRD8 1548 aa21.45■■□□□ 1.02
SPOCK1-206ENST00000509293 GCC2Q8IWJ2 1684 aa21.45■■□□□ 1.02
SPOCK1-206ENST00000509293 ACIN1Q9UKV3 1341 aaKnown RBP21.45■■□□□ 1.02
SPOCK1-206ENST00000509293 MYT1LQ9UL68 1186 aa21.43■■□□□ 1.02
SPOCK1-206ENST00000509293 ANKRD50Q9ULJ7 1429 aa21.42■■□□□ 1.02
SPOCK1-206ENST00000509293 ERBINQ96RT1 1412 aa21.41■■□□□ 1.02
SPOCK1-206ENST00000509293 DHX29Q7Z478 1369 aaKnown RBP21.41■■□□□ 1.02
SPOCK1-206ENST00000509293 DIP2CQ9Y2E4 1556 aa21.4■■□□□ 1.02
SPOCK1-206ENST00000509293 ABCA6Q8N139 1617 aa21.4■■□□□ 1.02
SPOCK1-206ENST00000509293 ATP10AO60312 1499 aa21.39■■□□□ 1.02
SPOCK1-206ENST00000509293 A2MP01023 1474 aa21.39■■□□□ 1.02
SPOCK1-206ENST00000509293 YEATS2Q9ULM3 1422 aa21.39■■□□□ 1.02
SPOCK1-206ENST00000509293 ARHGEF40Q8TER5 1519 aa21.39■■□□□ 1.01
SPOCK1-206ENST00000509293 RAB3GAP2Q9H2M9 1393 aa21.38■■□□□ 1.01
SPOCK1-206ENST00000509293 REREQ9P2R6 1566 aa21.38■■□□□ 1.01
SPOCK1-206ENST00000509293 EIF2AK4Q9P2K8 1649 aaKnown RBP21.33■■□□□ 1.01
SPOCK1-206ENST00000509293 AGLP35573 1532 aa21.32■■□□□ 1
SPOCK1-206ENST00000509293 BCORL1Q5H9F3 1711 aa21.32■■□□□ 1
SPOCK1-206ENST00000509293 UNC13BO14795 1591 aa21.25■□□□□ 0.99
SPOCK1-206ENST00000509293 KIF3BO15066 747 aa21.25■□□□□ 0.99
SPOCK1-206ENST00000509293 DEPDC5O75140 1603 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms