RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 HAP1P54257 671 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-210ENST00000508216 REM2Q8IYK8 340 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-210ENST00000508216 SECISBP2LQ93073 1101 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-210ENST00000508216 PNNQ9H307 717 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-210ENST00000508216 NCAPD3P42695 1498 aa14.32□□□□□ -0.12
PDLIM5-210ENST00000508216 ARID3AQ99856 593 aa14.32□□□□□ -0.12
PDLIM5-210ENST00000508216 RRAGDQ9NQL2 400 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-210ENST00000508216 TAOK2Q9UL54 1235 aa14.3□□□□□ -0.12
PDLIM5-210ENST00000508216 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
PDLIM5-210ENST00000508216 TMEM51Q9NW97 253 aa14.27□□□□□ -0.12
PDLIM5-210ENST00000508216 FRAT1Q92837 279 aaPredicted RBP14.27□□□□□ -0.13
PDLIM5-210ENST00000508216 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
PDLIM5-210ENST00000508216 ANP32BQ92688 251 aaKnown RBP14.26□□□□□ -0.13
PDLIM5-210ENST00000508216 SPDYE1Q8NFV5 336 aaPredicted RBP14.25□□□□□ -0.13
PDLIM5-210ENST00000508216 MMP14P50281 582 aa14.24□□□□□ -0.13
PDLIM5-210ENST00000508216 TERF1P54274 439 aa14.22□□□□□ -0.13
PDLIM5-210ENST00000508216 TAF3Q5VWG9 929 aa14.22□□□□□ -0.13
PDLIM5-210ENST00000508216 DCAF11Q8TEB1 546 aa14.22□□□□□ -0.13
PDLIM5-210ENST00000508216 RGS22Q8NE09 1264 aa14.21□□□□□ -0.13
PDLIM5-210ENST00000508216 DDRGK1Q96HY6 314 aa14.21□□□□□ -0.13
PDLIM5-210ENST00000508216 KIF20AO95235 890 aa14.2□□□□□ -0.14
PDLIM5-210ENST00000508216 L1TD1Q5T7N2 865 aaKnown RBP14.2□□□□□ -0.14
PDLIM5-210ENST00000508216 MTERF4Q7Z6M4 381 aaKnown RBP14.2□□□□□ -0.14
PDLIM5-210ENST00000508216 NACADO15069 1562 aa14.2□□□□□ -0.14
PDLIM5-210ENST00000508216 ZNF830Q96NB3 372 aaPredicted RBP14.19□□□□□ -0.14
PDLIM5-210ENST00000508216 CLGNO14967 610 aa14.17□□□□□ -0.14
PDLIM5-210ENST00000508216 SLC20A2Q08357 652 aa14.17□□□□□ -0.14
PDLIM5-210ENST00000508216 DMTNQ08495 405 aa14.17□□□□□ -0.14
PDLIM5-210ENST00000508216 GRIPAP1Q4V328 841 aa14.16□□□□□ -0.14
PDLIM5-210ENST00000508216 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.16□□□□□ -0.14
PDLIM5-210ENST00000508216 NFKBIBQ15653 356 aa14.15□□□□□ -0.14
PDLIM5-210ENST00000508216 PITPNM1O00562 1244 aa14.14□□□□□ -0.15
PDLIM5-210ENST00000508216 HMGB1P09429 215 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-210ENST00000508216 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
PDLIM5-210ENST00000508216 CLEC11AQ9Y240 323 aa14.14□□□□□ -0.15
PDLIM5-210ENST00000508216 PPP4R3BQ5MIZ7 849 aa14.11□□□□□ -0.15
PDLIM5-210ENST00000508216 AXDND1Q5T1B0 1012 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-210ENST00000508216 IRX3P78415 501 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-210ENST00000508216 TICAM2Q86XR7 235 aa14.11□□□□□ -0.15
PDLIM5-210ENST00000508216 PTMAP06454 111 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-210ENST00000508216 VASPP50552 380 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-210ENST00000508216 CNPY4Q8N129 248 aa14.1□□□□□ -0.15
PDLIM5-210ENST00000508216 ZNF622Q969S3 477 aaKnown RBP eCLIP14.09□□□□□ -0.15
PDLIM5-210ENST00000508216 GTPBP4Q9BZE4 634 aaKnown RBP14.09□□□□□ -0.15
PDLIM5-210ENST00000508216 LAS1LQ9Y4W2 734 aaKnown RBP14.09□□□□□ -0.15
PDLIM5-210ENST00000508216 TNNT2P45379 298 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-210ENST00000508216 PEG3Q9GZU2 1588 aa14.07□□□□□ -0.16
PDLIM5-210ENST00000508216 GOLGA6L3A6NEY3 463 aa14.07□□□□□ -0.16
PDLIM5-210ENST00000508216 LETM1O95202 739 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-210ENST00000508216 PRR29P0C7W0 189 aa14.05□□□□□ -0.16
PDLIM5-210ENST00000508216 PTMSP20962 102 aa14.05□□□□□ -0.16
PDLIM5-210ENST00000508216 ZCCHC6Q5VYS8 1495 aaKnown RBP14.05□□□□□ -0.16
PDLIM5-210ENST00000508216 MCCP23508 829 aa14.04□□□□□ -0.16
PDLIM5-210ENST00000508216 KCNG1Q9UIX4 513 aa14.02□□□□□ -0.16
PDLIM5-210ENST00000508216 CLSTN1O94985 981 aa14.01□□□□□ -0.17
PDLIM5-210ENST00000508216 MS4A1P11836 297 aa14.01□□□□□ -0.17
PDLIM5-210ENST00000508216 CCDC9Q9Y3X0 531 aaKnown RBP14.01□□□□□ -0.17
PDLIM5-210ENST00000508216 YY1AP1Q9H869 796 aa14.01□□□□□ -0.17
PDLIM5-210ENST00000508216 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-210ENST00000508216 TCERG1O14776 1098 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-210ENST00000508216 PHF14O94880 888 aa13.99□□□□□ -0.17
PDLIM5-210ENST00000508216 PSEN1P49768 467 aa13.99□□□□□ -0.17
PDLIM5-210ENST00000508216 ZSCAN20P17040 1043 aaPredicted RBP13.99□□□□□ -0.17
PDLIM5-210ENST00000508216 DHX57Q6P158 1386 aaKnown RBP13.98□□□□□ -0.17
PDLIM5-210ENST00000508216 WWC1Q8IX03 1113 aa13.98□□□□□ -0.17
PDLIM5-210ENST00000508216 PLCD3Q8N3E9 789 aa13.98□□□□□ -0.17
PDLIM5-210ENST00000508216 TRIM52Q96A61 297 aa13.98□□□□□ -0.17
PDLIM5-210ENST00000508216 TRIM44Q96DX7 344 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-210ENST00000508216 PPP1R15AO75807 674 aaPredicted RBP13.97□□□□□ -0.17
PDLIM5-210ENST00000508216 FAM193AP78312 1265 aa13.97□□□□□ -0.17
PDLIM5-210ENST00000508216 B4GALNT3Q6L9W6 998 aa13.97□□□□□ -0.17
PDLIM5-210ENST00000508216 CHRDL2Q6WN34 429 aa13.97□□□□□ -0.17
PDLIM5-210ENST00000508216 ZHX1Q9UKY1 873 aaPredicted RBP13.97□□□□□ -0.17
PDLIM5-210ENST00000508216 CEP120Q8N960 986 aa13.96□□□□□ -0.18
PDLIM5-210ENST00000508216 IRX6P78412 446 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-210ENST00000508216 HDAC5Q9UQL6 1122 aa13.95□□□□□ -0.18
PDLIM5-210ENST00000508216 RNF123Q5XPI4 1314 aa13.95□□□□□ -0.18
PDLIM5-210ENST00000508216 ISY1Q9ULR0 285 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-210ENST00000508216 TPRNQ4KMQ1 711 aa13.94□□□□□ -0.18
PDLIM5-210ENST00000508216 FSD2A1L4K1 749 aa13.93□□□□□ -0.18
PDLIM5-210ENST00000508216 ESPNB1AK53 854 aa13.92□□□□□ -0.18
PDLIM5-210ENST00000508216 IFNLR1Q8IU57 520 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-210ENST00000508216 BACH2Q9BYV9 841 aa13.91□□□□□ -0.18
PDLIM5-210ENST00000508216 GEMIN8Q9NWZ8 242 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-210ENST00000508216 DNAJC2Q99543 621 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-210ENST00000508216 ANP32CO43423 234 aa13.9□□□□□ -0.18
PDLIM5-210ENST00000508216 RIPK4P57078 832 aa13.9□□□□□ -0.18
PDLIM5-210ENST00000508216 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
PDLIM5-210ENST00000508216 ZBED9Q6R2W3 1325 aa13.89□□□□□ -0.19
PDLIM5-210ENST00000508216 FXR2P51116 673 aaKnown RBP eCLIP13.89□□□□□ -0.19
PDLIM5-210ENST00000508216 PLCD4Q9BRC7 762 aa13.89□□□□□ -0.19
PDLIM5-210ENST00000508216 SMARCA2P51531 1590 aa13.89□□□□□ -0.19
PDLIM5-210ENST00000508216 VGLL3A8MV65 326 aa13.88□□□□□ -0.19
PDLIM5-210ENST00000508216 CCDC94Q9BW85 323 aaPredicted RBP13.88□□□□□ -0.19
PDLIM5-210ENST00000508216 CUX2O14529 1486 aa13.88□□□□□ -0.19
PDLIM5-210ENST00000508216 DNTTIP2Q5QJE6 756 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-210ENST00000508216 SLC52A1Q9NWF4 448 aa13.87□□□□□ -0.19
PDLIM5-210ENST00000508216 PHLDB1Q86UU1 1377 aa13.87□□□□□ -0.19
PDLIM5-210ENST00000508216 OFD1O75665 1012 aa13.86□□□□□ -0.19
PDLIM5-210ENST00000508216 SETQ01105 290 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms