RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 UNCXA6NJT0 531 aa10.65□□□□□ -0.7
PDGFRA-206ENST00000508170 TEX2Q8IWB9 1127 aa10.65□□□□□ -0.7
PDGFRA-206ENST00000508170 SEMA3EO15041 775 aa10.65□□□□□ -0.71
PDGFRA-206ENST00000508170 MYT1LQ9UL68 1186 aa10.64□□□□□ -0.71
PDGFRA-206ENST00000508170 TESPA1A2RU30 521 aaPredicted RBP10.63□□□□□ -0.71
PDGFRA-206ENST00000508170 SPATA32Q96LK8 384 aa10.62□□□□□ -0.71
PDGFRA-206ENST00000508170 FAM117AQ9C073 453 aa10.61□□□□□ -0.71
PDGFRA-206ENST00000508170 ARIH1Q9Y4X5 557 aaPredicted RBP10.61□□□□□ -0.71
PDGFRA-206ENST00000508170 TRIM41Q8WV44 630 aa10.61□□□□□ -0.71
PDGFRA-206ENST00000508170 NCLP19338 710 aaKnown RBP10.6□□□□□ -0.71
PDGFRA-206ENST00000508170 ANKRD13AQ8IZ07 590 aa10.6□□□□□ -0.71
PDGFRA-206ENST00000508170 POLA2Q14181 598 aa10.59□□□□□ -0.71
PDGFRA-206ENST00000508170 PRDM10Q9NQV6 1147 aa10.58□□□□□ -0.72
PDGFRA-206ENST00000508170 CADPS2Q86UW7 1296 aa10.57□□□□□ -0.72
PDGFRA-206ENST00000508170 LOC102724159A0A0B4J2E5 919 aa10.57□□□□□ -0.72
PDGFRA-206ENST00000508170 PWP2Q15269 919 aaKnown RBP10.57□□□□□ -0.72
PDGFRA-206ENST00000508170 NOL8Q76FK4 1167 aaKnown RBP10.57□□□□□ -0.72
PDGFRA-206ENST00000508170 PDE4DQ08499 809 aa10.56□□□□□ -0.72
PDGFRA-206ENST00000508170 SETQ01105 290 aaPredicted RBP10.56□□□□□ -0.72
PDGFRA-206ENST00000508170 PROSER2Q86WR7 435 aaPredicted RBP10.55□□□□□ -0.72
PDGFRA-206ENST00000508170 PLCD4Q9BRC7 762 aa10.55□□□□□ -0.72
PDGFRA-206ENST00000508170 RIPOR2Q9Y4F9 1068 aa10.55□□□□□ -0.72
PDGFRA-206ENST00000508170 ARHGEF1Q92888 912 aaKnown RBP10.54□□□□□ -0.72
PDGFRA-206ENST00000508170 ZNF219Q9P2Y4 722 aaPredicted RBP10.54□□□□□ -0.72
PDGFRA-206ENST00000508170 PLEKHG3A1L390 1219 aa10.53□□□□□ -0.72
PDGFRA-206ENST00000508170 BRD1O95696 1058 aa10.53□□□□□ -0.72
PDGFRA-206ENST00000508170 EXOC8Q8IYI6 725 aa10.53□□□□□ -0.72
PDGFRA-206ENST00000508170 PLEKHD1A6NEE1 506 aa10.53□□□□□ -0.72
PDGFRA-206ENST00000508170 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
PDGFRA-206ENST00000508170 PATL2C9JE40 543 aaKnown RBP10.52□□□□□ -0.73
PDGFRA-206ENST00000508170 AAMPQ13685 434 aa10.52□□□□□ -0.73
PDGFRA-206ENST00000508170 TRIM66O15016 1216 aa10.51□□□□□ -0.73
PDGFRA-206ENST00000508170 FNBP4Q8N3X1 1017 aaPredicted RBP10.51□□□□□ -0.73
PDGFRA-206ENST00000508170 STK25O00506 426 aa10.5□□□□□ -0.73
PDGFRA-206ENST00000508170 MAFGO15525 162 aa10.5□□□□□ -0.73
PDGFRA-206ENST00000508170 HOXD11P31277 338 aaPredicted RBP10.49□□□□□ -0.73
PDGFRA-206ENST00000508170 ANAPC15P60006 121 aa10.49□□□□□ -0.73
PDGFRA-206ENST00000508170 MCM6Q14566 821 aa10.49□□□□□ -0.73
PDGFRA-206ENST00000508170 MARCH6O60337 910 aa10.48□□□□□ -0.73
PDGFRA-206ENST00000508170 KCNA1Q09470 495 aa10.48□□□□□ -0.73
PDGFRA-206ENST00000508170 ZC3H4Q9UPT8 1303 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-206ENST00000508170 PTMSP20962 102 aa10.48□□□□□ -0.73
PDGFRA-206ENST00000508170 KRI1Q8N9T8 703 aaKnown RBP10.47□□□□□ -0.73
PDGFRA-206ENST00000508170 ANKRD62A6NC57 917 aa10.46□□□□□ -0.74
PDGFRA-206ENST00000508170 PLSCR2Q9NRY7 297 aa10.46□□□□□ -0.74
PDGFRA-206ENST00000508170 POM121Q96HA1 1249 aa10.45□□□□□ -0.74
PDGFRA-206ENST00000508170 RYDENQ9NUL5 291 aaKnown RBP10.45□□□□□ -0.74
PDGFRA-206ENST00000508170 HSP90AB4PQ58FF6 505 aa10.44□□□□□ -0.74
PDGFRA-206ENST00000508170 DRC1Q96MC2 740 aa10.44□□□□□ -0.74
PDGFRA-206ENST00000508170 SIRT1Q96EB6 747 aa10.43□□□□□ -0.74
PDGFRA-206ENST00000508170 KIAA1522Q9P206 1035 aaPredicted RBP10.43□□□□□ -0.74
PDGFRA-206ENST00000508170 CNPY4Q8N129 248 aa10.43□□□□□ -0.74
PDGFRA-206ENST00000508170 MYH16Q9H6N6 1097 aa10.42□□□□□ -0.74
PDGFRA-206ENST00000508170 PPME1Q9Y570 386 aa10.42□□□□□ -0.74
PDGFRA-206ENST00000508170 CENPBP07199 599 aaPredicted RBP10.42□□□□□ -0.74
PDGFRA-206ENST00000508170 HIRIP3Q9BW71 556 aaPredicted RBP10.42□□□□□ -0.74
PDGFRA-206ENST00000508170 SND1Q7KZF4 910 aaKnown RBP eCLIP10.41□□□□□ -0.74
PDGFRA-206ENST00000508170 RBM47A0AV96 593 aaKnown RBP10.4□□□□□ -0.74
PDGFRA-206ENST00000508170 RIOK3O14730 519 aaKnown RBP10.4□□□□□ -0.74
PDGFRA-206ENST00000508170 DDRGK1Q96HY6 314 aa10.4□□□□□ -0.74
PDGFRA-206ENST00000508170 PPP1R15AO75807 674 aaPredicted RBP10.39□□□□□ -0.75
PDGFRA-206ENST00000508170 SREK1Q8WXA9 508 aaKnown RBP10.39□□□□□ -0.75
PDGFRA-206ENST00000508170 IVNS1ABPQ9Y6Y0 642 aa10.38□□□□□ -0.75
PDGFRA-206ENST00000508170 TPD52L2O43399 206 aaKnown RBP10.37□□□□□ -0.75
PDGFRA-206ENST00000508170 GPATCH11Q8N954 259 aa10.37□□□□□ -0.75
PDGFRA-206ENST00000508170 MRRFQ96E11 262 aaKnown RBP10.37□□□□□ -0.75
PDGFRA-206ENST00000508170 RBM27Q9P2N5 1060 aaKnown RBP10.37□□□□□ -0.75
PDGFRA-206ENST00000508170 SMYD5Q6GMV2 418 aa10.37□□□□□ -0.75
PDGFRA-206ENST00000508170 DNAJC2Q99543 621 aaKnown RBP10.37□□□□□ -0.75
PDGFRA-206ENST00000508170 SUGT1Q9Y2Z0 365 aa10.37□□□□□ -0.75
PDGFRA-206ENST00000508170 MICAL1Q8TDZ2 1067 aa10.36□□□□□ -0.75
PDGFRA-206ENST00000508170 FAM50AQ14320 339 aaKnown RBP10.35□□□□□ -0.75
PDGFRA-206ENST00000508170 LAS1LQ9Y4W2 734 aaKnown RBP10.35□□□□□ -0.75
PDGFRA-206ENST00000508170 GORABQ5T7V8 394 aa10.34□□□□□ -0.75
PDGFRA-206ENST00000508170 MIER1Q8N108 512 aa10.34□□□□□ -0.75
PDGFRA-206ENST00000508170 SLC52A1Q9NWF4 448 aa10.34□□□□□ -0.75
PDGFRA-206ENST00000508170 ACIN1Q9UKV3 1341 aaKnown RBP10.34□□□□□ -0.75
PDGFRA-206ENST00000508170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.33□□□□□ -0.76
PDGFRA-206ENST00000508170 E2F4Q16254 413 aa10.33□□□□□ -0.76
PDGFRA-206ENST00000508170 HNRNPUL2Q1KMD3 747 aaKnown RBP10.33□□□□□ -0.76
PDGFRA-206ENST00000508170 SGSM3Q96HU1 749 aa10.33□□□□□ -0.76
PDGFRA-206ENST00000508170 ZNF662Q6ZS27 426 aa10.33□□□□□ -0.76
PDGFRA-206ENST00000508170 SPTY2D1Q68D10 685 aaPredicted RBP10.32□□□□□ -0.76
PDGFRA-206ENST00000508170 TMTC2Q8N394 836 aa10.32□□□□□ -0.76
PDGFRA-206ENST00000508170 GRIPAP1Q4V328 841 aa10.31□□□□□ -0.76
PDGFRA-206ENST00000508170 GPIHBP1Q8IV16 184 aa10.31□□□□□ -0.76
PDGFRA-206ENST00000508170 ANO8Q9HCE9 1232 aaPredicted RBP10.31□□□□□ -0.76
PDGFRA-206ENST00000508170 STAG3Q9UJ98 1225 aa10.31□□□□□ -0.76
PDGFRA-206ENST00000508170 TSR1Q2NL82 804 aaKnown RBP10.31□□□□□ -0.76
PDGFRA-206ENST00000508170 GOPCQ9HD26 462 aa10.31□□□□□ -0.76
PDGFRA-206ENST00000508170 RBM26Q5T8P6 1007 aaKnown RBP10.3□□□□□ -0.76
PDGFRA-206ENST00000508170 GIMAP6Q6P9H5 292 aa10.3□□□□□ -0.76
PDGFRA-206ENST00000508170 FAM43BQ6ZT52 329 aaPredicted RBP10.3□□□□□ -0.76
PDGFRA-206ENST00000508170 MCCP23508 829 aa10.3□□□□□ -0.76
PDGFRA-206ENST00000508170 RAB11FIP3O75154 756 aa10.29□□□□□ -0.76
PDGFRA-206ENST00000508170 TCF3P15923 654 aa10.29□□□□□ -0.76
PDGFRA-206ENST00000508170 PPP1R1BQ9UD71 204 aaPredicted RBP10.29□□□□□ -0.76
PDGFRA-206ENST00000508170 STK24Q9Y6E0 443 aa10.29□□□□□ -0.76
PDGFRA-206ENST00000508170 C8orf37Q96NL8 207 aa10.29□□□□□ -0.76
PDGFRA-206ENST00000508170 CARNS1A5YM72 827 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms