RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 PPP1R15BQ5SWA1 713 aa14.48□□□□□ -0.09
COL6A4P1-204ENST00000508169 ARIH1Q9Y4X5 557 aaPredicted RBP14.48□□□□□ -0.09
COL6A4P1-204ENST00000508169 TESPA1A2RU30 521 aaPredicted RBP14.46□□□□□ -0.09
COL6A4P1-204ENST00000508169 GABBR2O75899 941 aa14.46□□□□□ -0.09
COL6A4P1-204ENST00000508169 G3V3G9 751 aa14.43□□□□□ -0.1
COL6A4P1-204ENST00000508169 PLCG2P16885 1265 aa14.43□□□□□ -0.1
COL6A4P1-204ENST00000508169 BOLA1Q9Y3E2 137 aa14.43□□□□□ -0.1
COL6A4P1-204ENST00000508169 TMC2Q8TDI7 906 aa14.42□□□□□ -0.1
COL6A4P1-204ENST00000508169 TMEM121BQ9BXQ6 578 aaPredicted RBP14.41□□□□□ -0.1
COL6A4P1-204ENST00000508169 DSG2Q14126 1118 aa14.39□□□□□ -0.11
COL6A4P1-204ENST00000508169 SMYD5Q6GMV2 418 aa14.38□□□□□ -0.11
COL6A4P1-204ENST00000508169 DCBLD2Q96PD2 775 aa14.38□□□□□ -0.11
COL6A4P1-204ENST00000508169 FOXK1P85037 733 aa14.37□□□□□ -0.11
COL6A4P1-204ENST00000508169 L3MBTL3Q96JM7 780 aaPredicted RBP14.35□□□□□ -0.11
COL6A4P1-204ENST00000508169 SEC24BO95487 1268 aa14.34□□□□□ -0.11
COL6A4P1-204ENST00000508169 POTEHQ6S545 545 aa14.34□□□□□ -0.11
COL6A4P1-204ENST00000508169 PELP1Q8IZL8 1130 aaKnown RBP14.33□□□□□ -0.12
COL6A4P1-204ENST00000508169 C2orf72A6NCS6 295 aa14.32□□□□□ -0.12
COL6A4P1-204ENST00000508169 EMILIN3Q9NT22 766 aa14.32□□□□□ -0.12
COL6A4P1-204ENST00000508169 DPYSL4O14531 572 aa14.3□□□□□ -0.12
COL6A4P1-204ENST00000508169 KIF3CO14782 793 aa14.3□□□□□ -0.12
COL6A4P1-204ENST00000508169 PLPP6Q8IY26 295 aa14.3□□□□□ -0.12
COL6A4P1-204ENST00000508169 ZC3H15Q8WU90 426 aaKnown RBP14.3□□□□□ -0.12
COL6A4P1-204ENST00000508169 SLC39A7Q92504 469 aa14.29□□□□□ -0.12
COL6A4P1-204ENST00000508169 COLQQ9Y215 455 aaPredicted RBP14.29□□□□□ -0.12
COL6A4P1-204ENST00000508169 SPDYE16A6NNV3 312 aaPredicted RBP14.26□□□□□ -0.13
COL6A4P1-204ENST00000508169 PDIA6Q15084 440 aa14.25□□□□□ -0.13
COL6A4P1-204ENST00000508169 C7P10643 843 aa14.24□□□□□ -0.13
COL6A4P1-204ENST00000508169 MLLT3P42568 568 aaPredicted RBP14.24□□□□□ -0.13
COL6A4P1-204ENST00000508169 TMEM92Q6UXU6 159 aa14.21□□□□□ -0.13
COL6A4P1-204ENST00000508169 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
COL6A4P1-204ENST00000508169 METRNQ9UJH8 293 aa14.2□□□□□ -0.14
COL6A4P1-204ENST00000508169 RBM26Q5T8P6 1007 aaKnown RBP14.17□□□□□ -0.14
COL6A4P1-204ENST00000508169 MAP3K9P80192 1104 aa14.16□□□□□ -0.14
COL6A4P1-204ENST00000508169 ZMYND10O75800 440 aa14.15□□□□□ -0.14
COL6A4P1-204ENST00000508169 POTEIP0CG38 1075 aa14.15□□□□□ -0.14
COL6A4P1-204ENST00000508169 GPIHBP1Q8IV16 184 aa14.14□□□□□ -0.15
COL6A4P1-204ENST00000508169 SLC24A3Q9HC58 644 aa14.14□□□□□ -0.15
COL6A4P1-204ENST00000508169 C3orf67Q6ZVT6 689 aa14.13□□□□□ -0.15
COL6A4P1-204ENST00000508169 UPF1Q92900 1129 aaKnown RBP eCLIP14.13□□□□□ -0.15
COL6A4P1-204ENST00000508169 SP7Q8TDD2 431 aaPredicted RBP14.12□□□□□ -0.15
COL6A4P1-204ENST00000508169 OXER1Q8TDS5 423 aa14.1□□□□□ -0.15
COL6A4P1-204ENST00000508169 BARGINQ6ZT62 677 aa14.08□□□□□ -0.16
COL6A4P1-204ENST00000508169 GRXCR2A6NFK2 248 aa14.05□□□□□ -0.16
COL6A4P1-204ENST00000508169 BRPF1P55201 1214 aaPredicted RBP14.05□□□□□ -0.16
COL6A4P1-204ENST00000508169 TBC1D12O60347 775 aa14.04□□□□□ -0.16
COL6A4P1-204ENST00000508169 TMEM132AQ24JP5 1023 aa14.04□□□□□ -0.16
COL6A4P1-204ENST00000508169 PTGER2P43116 358 aa14□□□□□ -0.17
COL6A4P1-204ENST00000508169 NEUROD2Q15784 382 aa14□□□□□ -0.17
COL6A4P1-204ENST00000508169 PTCD2Q8WV60 388 aaKnown RBP14□□□□□ -0.17
COL6A4P1-204ENST00000508169 EIF2AK3Q9NZJ5 1116 aaKnown RBP14□□□□□ -0.17
COL6A4P1-204ENST00000508169 ZNF316A6NFI3 1004 aaPredicted RBP13.99□□□□□ -0.17
COL6A4P1-204ENST00000508169 EVI5O60447 810 aa13.99□□□□□ -0.17
COL6A4P1-204ENST00000508169 KRI1Q8N9T8 703 aaKnown RBP13.99□□□□□ -0.17
COL6A4P1-204ENST00000508169 SLC34A2O95436 690 aa13.97□□□□□ -0.17
COL6A4P1-204ENST00000508169 DDX12PQ92771 950 aa13.97□□□□□ -0.17
COL6A4P1-204ENST00000508169 AK7Q96M32 723 aa13.97□□□□□ -0.17
COL6A4P1-204ENST00000508169 OSBPP22059 807 aa13.96□□□□□ -0.17
COL6A4P1-204ENST00000508169 GPR37O15354 613 aa13.95□□□□□ -0.18
COL6A4P1-204ENST00000508169 NUTM2FA1L443 756 aa13.94□□□□□ -0.18
COL6A4P1-204ENST00000508169 ANO8Q9HCE9 1232 aaPredicted RBP13.88□□□□□ -0.19
COL6A4P1-204ENST00000508169 GTF3C3Q9Y5Q9 886 aa13.88□□□□□ -0.19
COL6A4P1-204ENST00000508169 FCHSD2O94868 740 aa13.85□□□□□ -0.19
COL6A4P1-204ENST00000508169 PRIM1P49642 420 aaKnown RBP13.85□□□□□ -0.19
COL6A4P1-204ENST00000508169 PCDHGA4Q9Y5G9 962 aa13.85□□□□□ -0.19
COL6A4P1-204ENST00000508169 TRIM66O15016 1216 aa13.83□□□□□ -0.2
COL6A4P1-204ENST00000508169 GNPATO15228 680 aa13.83□□□□□ -0.2
COL6A4P1-204ENST00000508169 MAP2K5Q13163 448 aa13.83□□□□□ -0.2
COL6A4P1-204ENST00000508169 HIC1Q14526 733 aa13.83□□□□□ -0.2
COL6A4P1-204ENST00000508169 MINK1Q8N4C8 1332 aaPredicted RBP13.83□□□□□ -0.2
COL6A4P1-204ENST00000508169 PHF14O94880 888 aa13.81□□□□□ -0.2
COL6A4P1-204ENST00000508169 EPAS1Q99814 870 aa13.81□□□□□ -0.2
COL6A4P1-204ENST00000508169 GPBP1L1Q9HC44 474 aaPredicted RBP13.8□□□□□ -0.2
COL6A4P1-204ENST00000508169 PDE4DQ08499 809 aa13.79□□□□□ -0.2
COL6A4P1-204ENST00000508169 PTGDRQ13258 359 aa13.79□□□□□ -0.2
COL6A4P1-204ENST00000508169 EN1Q05925 392 aaPredicted RBP13.78□□□□□ -0.2
COL6A4P1-204ENST00000508169 CCDC102AQ96A19 550 aa13.78□□□□□ -0.2
COL6A4P1-204ENST00000508169 IRF6O14896 467 aa13.77□□□□□ -0.21
COL6A4P1-204ENST00000508169 POTEJP0CG39 1038 aa13.76□□□□□ -0.21
COL6A4P1-204ENST00000508169 FECHP22830 423 aa13.76□□□□□ -0.21
COL6A4P1-204ENST00000508169 KDM4CQ9H3R0 1056 aa13.75□□□□□ -0.21
COL6A4P1-204ENST00000508169 PCDHGA10Q9Y5H3 936 aa13.75□□□□□ -0.21
COL6A4P1-204ENST00000508169 MAP3K7O43318 606 aa13.74□□□□□ -0.21
COL6A4P1-204ENST00000508169 TYW1BQ6NUM6 668 aa13.74□□□□□ -0.21
COL6A4P1-204ENST00000508169 KDM4FA0A1W2PPD8 638 aa13.73□□□□□ -0.21
COL6A4P1-204ENST00000508169 DOK7Q18PE1 504 aa13.73□□□□□ -0.21
COL6A4P1-204ENST00000508169 SLAIN1Q8ND83 568 aa13.73□□□□□ -0.21
COL6A4P1-204ENST00000508169 RBM33Q96EV2 1170 aaKnown RBP13.73□□□□□ -0.21
COL6A4P1-204ENST00000508169 JPH4Q96JJ6 628 aa13.73□□□□□ -0.21
COL6A4P1-204ENST00000508169 CDHR5Q9HBB8 845 aa13.73□□□□□ -0.21
COL6A4P1-204ENST00000508169 POTEB2H3BUK9 544 aa13.72□□□□□ -0.21
COL6A4P1-204ENST00000508169 DAXXQ9UER7 740 aaPredicted RBP13.71□□□□□ -0.21
COL6A4P1-204ENST00000508169 FBXW7Q969H0 707 aa13.7□□□□□ -0.22
COL6A4P1-204ENST00000508169 SCUBE2Q9NQ36 999 aa13.7□□□□□ -0.22
COL6A4P1-204ENST00000508169 RIMBP2O15034 1052 aa13.68□□□□□ -0.22
COL6A4P1-204ENST00000508169 HOXB3P14651 431 aaPredicted RBP13.68□□□□□ -0.22
COL6A4P1-204ENST00000508169 AMHR2Q16671 573 aa13.68□□□□□ -0.22
COL6A4P1-204ENST00000508169 MAMSTRQ6ZN01 415 aa13.68□□□□□ -0.22
COL6A4P1-204ENST00000508169 NPDC1Q9NQX5 325 aaPredicted RBP13.68□□□□□ -0.22
COL6A4P1-204ENST00000508169 FOSBP53539 338 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms