RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 DNAJC5Q9H3Z4 198 aa10.14□□□□□ -0.79
CLDND1-212ENST00000506885 RYDENQ9NUL5 291 aaKnown RBP10.13□□□□□ -0.79
CLDND1-212ENST00000506885 PHF8Q9UPP1 1060 aa10.11□□□□□ -0.79
CLDND1-212ENST00000506885 POTEB3A0JP26 581 aa10.09□□□□□ -0.79
CLDND1-212ENST00000506885 POTEBQ6S5H4 581 aa10.09□□□□□ -0.79
CLDND1-212ENST00000506885 MFRPQ9BY79 579 aa10.08□□□□□ -0.8
CLDND1-212ENST00000506885 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
CLDND1-212ENST00000506885 DPY19L2Q6NUT2 758 aa10.07□□□□□ -0.8
CLDND1-212ENST00000506885 FBXO22Q8NEZ5 403 aa10.07□□□□□ -0.8
CLDND1-212ENST00000506885 MYT1LQ9UL68 1186 aa10.05□□□□□ -0.8
CLDND1-212ENST00000506885 MS4A4AQ96JQ5 239 aa10.04□□□□□ -0.8
CLDND1-212ENST00000506885 BBXQ8WY36 941 aaPredicted RBP10□□□□□ -0.81
CLDND1-212ENST00000506885 MICALL2Q8IY33 904 aa9.98□□□□□ -0.81
CLDND1-212ENST00000506885 PRKCSHP14314 528 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-212ENST00000506885 NKX1-1Q15270 411 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-212ENST00000506885 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-212ENST00000506885 HOXB3P14651 431 aaPredicted RBP9.96□□□□□ -0.82
CLDND1-212ENST00000506885 PLCB2Q00722 1185 aa9.96□□□□□ -0.82
CLDND1-212ENST00000506885 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.82
CLDND1-212ENST00000506885 BCANQ96GW7 911 aa9.93□□□□□ -0.82
CLDND1-212ENST00000506885 PTGER2P43116 358 aa9.92□□□□□ -0.82
CLDND1-212ENST00000506885 GTPBP6O43824 516 aaPredicted RBP9.91□□□□□ -0.82
CLDND1-212ENST00000506885 DOK7Q18PE1 504 aa9.91□□□□□ -0.82
CLDND1-212ENST00000506885 ERBB3P21860 1342 aa9.9□□□□□ -0.82
CLDND1-212ENST00000506885 HOXB1P14653 301 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-212ENST00000506885 PPP1R37O75864 691 aa9.89□□□□□ -0.83
CLDND1-212ENST00000506885 SPRYD3Q8NCJ5 442 aa9.87□□□□□ -0.83
CLDND1-212ENST00000506885 RIMBP2O15034 1052 aa9.86□□□□□ -0.83
CLDND1-212ENST00000506885 TMC2Q8TDI7 906 aa9.85□□□□□ -0.83
CLDND1-212ENST00000506885 HAP1P54257 671 aaPredicted RBP9.84□□□□□ -0.83
CLDND1-212ENST00000506885 VARS2Q5ST30 1063 aaKnown RBP9.82□□□□□ -0.84
CLDND1-212ENST00000506885 TMEM92Q6UXU6 159 aa9.81□□□□□ -0.84
CLDND1-212ENST00000506885 PLA2G2EQ9NZK7 142 aa9.8□□□□□ -0.84
CLDND1-212ENST00000506885 KIF3CO14782 793 aa9.79□□□□□ -0.84
CLDND1-212ENST00000506885 C2orf72A6NCS6 295 aa9.78□□□□□ -0.84
CLDND1-212ENST00000506885 PDE4AP27815 886 aa9.78□□□□□ -0.84
CLDND1-212ENST00000506885 PAXIP1Q6ZW49 1069 aaPredicted RBP9.78□□□□□ -0.84
CLDND1-212ENST00000506885 GPHNQ9NQX3 736 aaPredicted RBP9.78□□□□□ -0.84
CLDND1-212ENST00000506885 CFAP44Q96MT7 982 aa9.77□□□□□ -0.85
CLDND1-212ENST00000506885 ZSWIM6Q9HCJ5 1215 aa9.76□□□□□ -0.85
CLDND1-212ENST00000506885 FOXK1P85037 733 aa9.73□□□□□ -0.85
CLDND1-212ENST00000506885 TPRNQ4KMQ1 711 aa9.72□□□□□ -0.85
CLDND1-212ENST00000506885 GPR153Q6NV75 609 aa9.72□□□□□ -0.85
CLDND1-212ENST00000506885 ZNF687Q8N1G0 1237 aa9.72□□□□□ -0.85
CLDND1-212ENST00000506885 CRISPLD2Q9H0B8 497 aa9.72□□□□□ -0.85
CLDND1-212ENST00000506885 DAXXQ9UER7 740 aaPredicted RBP9.71□□□□□ -0.86
CLDND1-212ENST00000506885 SLC34A2O95436 690 aa9.7□□□□□ -0.86
CLDND1-212ENST00000506885 VSIG10Q8N0Z9 540 aa9.7□□□□□ -0.86
CLDND1-212ENST00000506885 ARSIQ5FYB1 569 aa9.69□□□□□ -0.86
CLDND1-212ENST00000506885 PLPP6Q8IY26 295 aa9.68□□□□□ -0.86
CLDND1-212ENST00000506885 DSG2Q14126 1118 aa9.67□□□□□ -0.86
CLDND1-212ENST00000506885 LARP6Q9BRS8 491 aaKnown RBP9.67□□□□□ -0.86
CLDND1-212ENST00000506885 NCKAP5LQ9HCH0 1330 aa9.66□□□□□ -0.86
CLDND1-212ENST00000506885 PPP1R15BQ5SWA1 713 aa9.66□□□□□ -0.86
CLDND1-212ENST00000506885 DDX27Q96GQ7 796 aaKnown RBP9.66□□□□□ -0.86
CLDND1-212ENST00000506885 TBC1D12O60347 775 aa9.65□□□□□ -0.86
CLDND1-212ENST00000506885 MFSD10Q14728 455 aa9.65□□□□□ -0.86
CLDND1-212ENST00000506885 ANKRD13DQ6ZTN6 518 aa9.65□□□□□ -0.86
CLDND1-212ENST00000506885 KHSRPQ92945 711 aaKnown RBP eCLIP9.65□□□□□ -0.862e-6■■■□□ 15
CLDND1-212ENST00000506885 ZNF316A6NFI3 1004 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-212ENST00000506885 CADPS2Q86UW7 1296 aa9.62□□□□□ -0.87
CLDND1-212ENST00000506885 PTCD2Q8WV60 388 aaKnown RBP9.62□□□□□ -0.87
CLDND1-212ENST00000506885 HCSTQ9UBK5 93 aa9.61□□□□□ -0.87
CLDND1-212ENST00000506885 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
CLDND1-212ENST00000506885 PCDHGA4Q9Y5G9 962 aa9.6□□□□□ -0.87
CLDND1-212ENST00000506885 IRX2Q9BZI1 471 aaPredicted RBP9.59□□□□□ -0.87
CLDND1-212ENST00000506885 LSM11P83369 360 aaKnown RBP eCLIP9.57□□□□□ -0.88
CLDND1-212ENST00000506885 ARXQ96QS3 562 aa9.56□□□□□ -0.88
CLDND1-212ENST00000506885 TIMELESSQ9UNS1 1208 aa9.56□□□□□ -0.88
CLDND1-212ENST00000506885 NUDT7P0C024 238 aa9.55□□□□□ -0.88
CLDND1-212ENST00000506885 OXER1Q8TDS5 423 aa9.55□□□□□ -0.88
CLDND1-212ENST00000506885 PSDA5PKW4 1024 aaPredicted RBP9.54□□□□□ -0.88
CLDND1-212ENST00000506885 CAMK2BQ13554 666 aa9.53□□□□□ -0.88
CLDND1-212ENST00000506885 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
CLDND1-212ENST00000506885 MAP3K9P80192 1104 aa9.52□□□□□ -0.89
CLDND1-212ENST00000506885 UPF1Q92900 1129 aaKnown RBP eCLIP9.51□□□□□ -0.89
CLDND1-212ENST00000506885 RGS20O76081 388 aa9.5□□□□□ -0.89
CLDND1-212ENST00000506885 PBX2P40425 430 aa9.5□□□□□ -0.89
CLDND1-212ENST00000506885 LHX6Q9UPM6 363 aa9.5□□□□□ -0.89
CLDND1-212ENST00000506885 AXIN2Q9Y2T1 843 aa9.5□□□□□ -0.89
CLDND1-212ENST00000506885 TULP1O00294 542 aaPredicted RBP9.49□□□□□ -0.89
CLDND1-212ENST00000506885 E2F4Q16254 413 aa9.49□□□□□ -0.89
CLDND1-212ENST00000506885 KDM2AQ9Y2K7 1162 aa9.48□□□□□ -0.89
CLDND1-212ENST00000506885 KDM4FA0A1W2PPD8 638 aa9.47□□□□□ -0.89
CLDND1-212ENST00000506885 POTEEQ6S8J3 1075 aa9.46□□□□□ -0.9
CLDND1-212ENST00000506885 EMILIN3Q9NT22 766 aa9.46□□□□□ -0.9
CLDND1-212ENST00000506885 EVI5O60447 810 aa9.45□□□□□ -0.9
CLDND1-212ENST00000506885 ANO8Q9HCE9 1232 aaPredicted RBP9.45□□□□□ -0.9
CLDND1-212ENST00000506885 ARIH1Q9Y4X5 557 aaPredicted RBP9.44□□□□□ -0.9
CLDND1-212ENST00000506885 SPDYE16A6NNV3 312 aaPredicted RBP9.42□□□□□ -0.9
CLDND1-212ENST00000506885 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
CLDND1-212ENST00000506885 P3H3Q8IVL6 736 aa9.41□□□□□ -0.9
CLDND1-212ENST00000506885 DPYSL4O14531 572 aa9.4□□□□□ -0.9
CLDND1-212ENST00000506885 ADGRD1Q6QNK2 874 aa9.39□□□□□ -0.91
CLDND1-212ENST00000506885 KCNH8Q96L42 1107 aa9.39□□□□□ -0.91
CLDND1-212ENST00000506885 ARHGAP33O14559 1287 aa9.38□□□□□ -0.91
CLDND1-212ENST00000506885 JPH4Q96JJ6 628 aa9.38□□□□□ -0.91
CLDND1-212ENST00000506885 GTF3C3Q9Y5Q9 886 aa9.38□□□□□ -0.91
CLDND1-212ENST00000506885 ERICH6Q7L0X2 663 aa9.37□□□□□ -0.91
CLDND1-212ENST00000506885 ZNF454Q8N9F8 522 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms