RNA–Protein interactions for RNA: ENST00000506065.1

PRDM5-208, Transcript of PR/SET domain 5, humanhuman

TSL 5

Gene PRDM5, Length 696 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-208ENST00000506065 ARIH1Q9Y4X5 557 aaPredicted RBP13.8□□□□□ -0.2
PRDM5-208ENST00000506065 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
PRDM5-208ENST00000506065 POTEGQ6S5H5 508 aa13.78□□□□□ -0.2
PRDM5-208ENST00000506065 MS4A3Q96HJ5 214 aa13.78□□□□□ -0.2
PRDM5-208ENST00000506065 ASTLQ6HA08 431 aaPredicted RBP13.77□□□□□ -0.21
PRDM5-208ENST00000506065 HOMEZQ8IX15 550 aa13.77□□□□□ -0.21
PRDM5-208ENST00000506065 CRISPLD2Q9H0B8 497 aa13.77□□□□□ -0.21
PRDM5-208ENST00000506065 METRNQ9UJH8 293 aa13.77□□□□□ -0.21
PRDM5-208ENST00000506065 DAXXQ9UER7 740 aaPredicted RBP13.75□□□□□ -0.21
PRDM5-208ENST00000506065 ATMINO43313 823 aaPredicted RBP13.74□□□□□ -0.21
PRDM5-208ENST00000506065 C7P10643 843 aa13.72□□□□□ -0.21
PRDM5-208ENST00000506065 BARGINQ6ZT62 677 aa13.72□□□□□ -0.21
PRDM5-208ENST00000506065 SLC39A7Q92504 469 aa13.72□□□□□ -0.21
PRDM5-208ENST00000506065 MS4A4AQ96JQ5 239 aa13.72□□□□□ -0.21
PRDM5-208ENST00000506065 POTEJP0CG39 1038 aa13.71□□□□□ -0.21
PRDM5-208ENST00000506065 CAMK2BQ13554 666 aa13.71□□□□□ -0.21
PRDM5-208ENST00000506065 AK7Q96M32 723 aa13.67□□□□□ -0.22
PRDM5-208ENST00000506065 MKRN3Q13064 507 aaKnown RBP13.66□□□□□ -0.22
PRDM5-208ENST00000506065 GPIHBP1Q8IV16 184 aa13.66□□□□□ -0.22
PRDM5-208ENST00000506065 TMEM106CQ9BVX2 250 aa13.65□□□□□ -0.22
PRDM5-208ENST00000506065 MAMSTRQ6ZN01 415 aa13.64□□□□□ -0.23
PRDM5-208ENST00000506065 KRI1Q8N9T8 703 aaKnown RBP13.63□□□□□ -0.23
PRDM5-208ENST00000506065 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
PRDM5-208ENST00000506065 PPP1R15BQ5SWA1 713 aa13.59□□□□□ -0.23
PRDM5-208ENST00000506065 RBM26Q5T8P6 1007 aaKnown RBP13.59□□□□□ -0.23
PRDM5-208ENST00000506065 PCDH10Q9P2E7 1040 aa13.59□□□□□ -0.23
PRDM5-208ENST00000506065 MLLT3P42568 568 aaPredicted RBP13.56□□□□□ -0.24
PRDM5-208ENST00000506065 GPHNQ9NQX3 736 aaPredicted RBP13.56□□□□□ -0.24
PRDM5-208ENST00000506065 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
PRDM5-208ENST00000506065 LCE2DQ5TA82 110 aaPredicted RBP13.55□□□□□ -0.24
PRDM5-208ENST00000506065 SPDYE16A6NNV3 312 aaPredicted RBP13.54□□□□□ -0.24
PRDM5-208ENST00000506065 FAM163AQ96GL9 167 aaPredicted RBP13.54□□□□□ -0.24
PRDM5-208ENST00000506065 SCUBE2Q9NQ36 999 aa13.54□□□□□ -0.24
PRDM5-208ENST00000506065 GPBP1L1Q9HC44 474 aaPredicted RBP13.52□□□□□ -0.25
PRDM5-208ENST00000506065 BMP2KQ9NSY1 1161 aaPredicted RBP13.51□□□□□ -0.25
PRDM5-208ENST00000506065 KDM4CQ9H3R0 1056 aa13.5□□□□□ -0.25
PRDM5-208ENST00000506065 TRPC6Q9Y210 931 aa13.5□□□□□ -0.25
PRDM5-208ENST00000506065 POTEFA5A3E0 1075 aa13.49□□□□□ -0.25
PRDM5-208ENST00000506065 DPYSL4O14531 572 aa13.49□□□□□ -0.25
PRDM5-208ENST00000506065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRDM5-208ENST00000506065 PDIA6Q15084 440 aa13.48□□□□□ -0.25
PRDM5-208ENST00000506065 IL27Q8NEV9 243 aa13.48□□□□□ -0.25
PRDM5-208ENST00000506065 TRIM66O15016 1216 aa13.46□□□□□ -0.25
PRDM5-208ENST00000506065 TIE1P35590 1138 aa13.46□□□□□ -0.25
PRDM5-208ENST00000506065 PDE4DQ08499 809 aa13.46□□□□□ -0.25
PRDM5-208ENST00000506065 ILDR1Q86SU0 546 aaPredicted RBP13.44□□□□□ -0.26
PRDM5-208ENST00000506065 TMC2Q8TDI7 906 aa13.43□□□□□ -0.26
PRDM5-208ENST00000506065 EMILIN3Q9NT22 766 aa13.43□□□□□ -0.26
PRDM5-208ENST00000506065 DSG2Q14126 1118 aa13.41□□□□□ -0.26
PRDM5-208ENST00000506065 TTLL13PA6NNM8 815 aa13.4□□□□□ -0.26
PRDM5-208ENST00000506065 FOXK1P85037 733 aa13.38□□□□□ -0.27
PRDM5-208ENST00000506065 COLQQ9Y215 455 aaPredicted RBP13.38□□□□□ -0.27
PRDM5-208ENST00000506065 ZMYND15Q9H091 742 aa13.37□□□□□ -0.27
PRDM5-208ENST00000506065 MINK1Q8N4C8 1332 aaPredicted RBP13.36□□□□□ -0.27
PRDM5-208ENST00000506065 SEC24BO95487 1268 aa13.35□□□□□ -0.27
PRDM5-208ENST00000506065 MICALL2Q8IY33 904 aa13.35□□□□□ -0.27
PRDM5-208ENST00000506065 GPR37O15354 613 aa13.33□□□□□ -0.28
PRDM5-208ENST00000506065 RSPH6AQ9H0K4 717 aa13.33□□□□□ -0.28
PRDM5-208ENST00000506065 TRIM35Q9UPQ4 493 aa13.33□□□□□ -0.28
PRDM5-208ENST00000506065 NUTM2FA1L443 756 aa13.31□□□□□ -0.28
PRDM5-208ENST00000506065 MAP2K5Q13163 448 aa13.31□□□□□ -0.28
PRDM5-208ENST00000506065 PLPP6Q8IY26 295 aa13.31□□□□□ -0.28
PRDM5-208ENST00000506065 GRXCR2A6NFK2 248 aa13.3□□□□□ -0.28
PRDM5-208ENST00000506065 MAP3K9P80192 1104 aa13.3□□□□□ -0.28
PRDM5-208ENST00000506065 DDRGK1Q96HY6 314 aa13.3□□□□□ -0.28
PRDM5-208ENST00000506065 ZNF316A6NFI3 1004 aaPredicted RBP13.28□□□□□ -0.28
PRDM5-208ENST00000506065 G3V3G9 751 aa13.28□□□□□ -0.28
PRDM5-208ENST00000506065 DPY19L2Q6NUT2 758 aa13.27□□□□□ -0.29
PRDM5-208ENST00000506065 CCDC102AQ96A19 550 aa13.27□□□□□ -0.29
PRDM5-208ENST00000506065 FAM117AQ9C073 453 aa13.27□□□□□ -0.29
PRDM5-208ENST00000506065 IER5LQ5T953 404 aa13.25□□□□□ -0.29
PRDM5-208ENST00000506065 IRF6O14896 467 aa13.24□□□□□ -0.29
PRDM5-208ENST00000506065 AMHR2Q16671 573 aa13.24□□□□□ -0.29
PRDM5-208ENST00000506065 CDAN1Q8IWY9 1227 aa13.24□□□□□ -0.29
PRDM5-208ENST00000506065 GNPATO15228 680 aa13.23□□□□□ -0.29
PRDM5-208ENST00000506065 C2orf72A6NCS6 295 aa13.22□□□□□ -0.29
PRDM5-208ENST00000506065 FCHSD2O94868 740 aa13.22□□□□□ -0.29
PRDM5-208ENST00000506065 HIC1Q14526 733 aa13.22□□□□□ -0.29
PRDM5-208ENST00000506065 PDCD7Q8N8D1 485 aaKnown RBP13.22□□□□□ -0.29
PRDM5-208ENST00000506065 BOLA1Q9Y3E2 137 aa13.22□□□□□ -0.29
PRDM5-208ENST00000506065 TMEM121BQ9BXQ6 578 aaPredicted RBP13.2□□□□□ -0.3
PRDM5-208ENST00000506065 PARP9Q8IXQ6 854 aa13.19□□□□□ -0.3
PRDM5-208ENST00000506065 KIF3CO14782 793 aa13.18□□□□□ -0.3
PRDM5-208ENST00000506065 OSBPP22059 807 aa13.18□□□□□ -0.3
PRDM5-208ENST00000506065 FLIIQ13045 1269 aa13.18□□□□□ -0.3
PRDM5-208ENST00000506065 SLAIN1Q8ND83 568 aa13.18□□□□□ -0.3
PRDM5-208ENST00000506065 PLEKHG3A1L390 1219 aa13.17□□□□□ -0.3
PRDM5-208ENST00000506065 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
PRDM5-208ENST00000506065 PTGER2P43116 358 aa13.16□□□□□ -0.3
PRDM5-208ENST00000506065 TTLL12Q14166 644 aaPredicted RBP13.16□□□□□ -0.3
PRDM5-208ENST00000506065 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.3
PRDM5-208ENST00000506065 TBC1D12O60347 775 aa13.15□□□□□ -0.3
PRDM5-208ENST00000506065 ST18O60284 1047 aa13.14□□□□□ -0.31
PRDM5-208ENST00000506065 GOPCQ9HD26 462 aa13.14□□□□□ -0.31
PRDM5-208ENST00000506065 UBTFP17480 764 aaKnown RBP13.13□□□□□ -0.31
PRDM5-208ENST00000506065 IRX5P78411 483 aaPredicted RBP13.13□□□□□ -0.31
PRDM5-208ENST00000506065 OXER1Q8TDS5 423 aa13.12□□□□□ -0.31
PRDM5-208ENST00000506065 DDX12PQ92771 950 aa13.12□□□□□ -0.31
PRDM5-208ENST00000506065 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
PRDM5-208ENST00000506065 PLCG2P16885 1265 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms