RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CRISPLD2Q9H0B8 497 aa9.78□□□□□ -0.84
TOPBP1-204ENST00000505804 BCANQ96GW7 911 aa9.74□□□□□ -0.85
TOPBP1-204ENST00000505804 GPHNQ9NQX3 736 aaPredicted RBP9.74□□□□□ -0.85
TOPBP1-204ENST00000505804 MFSD10Q14728 455 aa9.72□□□□□ -0.85
TOPBP1-204ENST00000505804 DDX27Q96GQ7 796 aaKnown RBP9.72□□□□□ -0.85
TOPBP1-204ENST00000505804 TMC2Q8TDI7 906 aa9.71□□□□□ -0.86
TOPBP1-204ENST00000505804 E2F4Q16254 413 aa9.7□□□□□ -0.86
TOPBP1-204ENST00000505804 KCNV2Q8TDN2 545 aa9.7□□□□□ -0.86
TOPBP1-204ENST00000505804 C2orf72A6NCS6 295 aa9.69□□□□□ -0.86
TOPBP1-204ENST00000505804 TMEM92Q6UXU6 159 aa9.69□□□□□ -0.86
TOPBP1-204ENST00000505804 DSG2Q14126 1118 aa9.68□□□□□ -0.86
TOPBP1-204ENST00000505804 PPP1R15BQ5SWA1 713 aa9.68□□□□□ -0.86
TOPBP1-204ENST00000505804 P3H3Q8IVL6 736 aa9.68□□□□□ -0.86
TOPBP1-204ENST00000505804 KIF3CO14782 793 aa9.67□□□□□ -0.86
TOPBP1-204ENST00000505804 POTEB2H3BUK9 544 aa9.66□□□□□ -0.86
TOPBP1-204ENST00000505804 NBR1Q14596 966 aa9.66□□□□□ -0.86
TOPBP1-204ENST00000505804 C3orf67Q6ZVT6 689 aa9.66□□□□□ -0.86
TOPBP1-204ENST00000505804 POTEJP0CG39 1038 aa9.65□□□□□ -0.86
TOPBP1-204ENST00000505804 FOXK1P85037 733 aa9.65□□□□□ -0.86
TOPBP1-204ENST00000505804 PLPP6Q8IY26 295 aa9.64□□□□□ -0.87
TOPBP1-204ENST00000505804 CAMK2BQ13554 666 aa9.62□□□□□ -0.87
TOPBP1-204ENST00000505804 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
TOPBP1-204ENST00000505804 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.62□□□□□ -0.87
TOPBP1-204ENST00000505804 EMILIN3Q9NT22 766 aa9.58□□□□□ -0.88
TOPBP1-204ENST00000505804 ARIH1Q9Y4X5 557 aaPredicted RBP9.56□□□□□ -0.88
TOPBP1-204ENST00000505804 DPYSL4O14531 572 aa9.54□□□□□ -0.88
TOPBP1-204ENST00000505804 SEMA3EO15041 775 aa9.53□□□□□ -0.88
TOPBP1-204ENST00000505804 UPF1Q92900 1129 aaKnown RBP eCLIP9.53□□□□□ -0.88
TOPBP1-204ENST00000505804 SCUBE2Q9NQ36 999 aa9.52□□□□□ -0.89
TOPBP1-204ENST00000505804 MAP3K9P80192 1104 aa9.51□□□□□ -0.89
TOPBP1-204ENST00000505804 MAMSTRQ6ZN01 415 aa9.51□□□□□ -0.89
TOPBP1-204ENST00000505804 SLAIN1Q8ND83 568 aa9.51□□□□□ -0.89
TOPBP1-204ENST00000505804 OXER1Q8TDS5 423 aa9.49□□□□□ -0.89
TOPBP1-204ENST00000505804 TESPA1A2RU30 521 aaPredicted RBP9.47□□□□□ -0.89
TOPBP1-204ENST00000505804 SLC34A2O95436 690 aa9.46□□□□□ -0.9
TOPBP1-204ENST00000505804 LHX8Q68G74 356 aa9.46□□□□□ -0.9
TOPBP1-204ENST00000505804 PTCD2Q8WV60 388 aaKnown RBP9.46□□□□□ -0.9
TOPBP1-204ENST00000505804 SPDYE16A6NNV3 312 aaPredicted RBP9.45□□□□□ -0.9
TOPBP1-204ENST00000505804 PRKCSHP14314 528 aaPredicted RBP9.45□□□□□ -0.9
TOPBP1-204ENST00000505804 OTUD5Q96G74 571 aa9.45□□□□□ -0.9
TOPBP1-204ENST00000505804 TBC1D12O60347 775 aa9.44□□□□□ -0.9
TOPBP1-204ENST00000505804 PDIA6Q15084 440 aa9.44□□□□□ -0.9
TOPBP1-204ENST00000505804 MLLT3P42568 568 aaPredicted RBP9.43□□□□□ -0.9
TOPBP1-204ENST00000505804 TPRNQ4KMQ1 711 aa9.43□□□□□ -0.9
TOPBP1-204ENST00000505804 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.43□□□□□ -0.9
TOPBP1-204ENST00000505804 EVI5O60447 810 aa9.41□□□□□ -0.9
TOPBP1-204ENST00000505804 HOXB3P14651 431 aaPredicted RBP9.41□□□□□ -0.9
TOPBP1-204ENST00000505804 TULP1O00294 542 aaPredicted RBP9.4□□□□□ -0.9
TOPBP1-204ENST00000505804 SMYD5Q6GMV2 418 aa9.4□□□□□ -0.9
TOPBP1-204ENST00000505804 PCDHGA4Q9Y5G9 962 aa9.4□□□□□ -0.9
TOPBP1-204ENST00000505804 DOK7Q18PE1 504 aa9.39□□□□□ -0.91
TOPBP1-204ENST00000505804 LMOD2Q6P5Q4 547 aa9.39□□□□□ -0.91
TOPBP1-204ENST00000505804 GRXCR2A6NFK2 248 aa9.37□□□□□ -0.91
TOPBP1-204ENST00000505804 ARSIQ5FYB1 569 aa9.37□□□□□ -0.91
TOPBP1-204ENST00000505804 DDX12PQ92771 950 aa9.37□□□□□ -0.91
TOPBP1-204ENST00000505804 KHSRPQ92945 711 aaKnown RBP eCLIP9.37□□□□□ -0.91
TOPBP1-204ENST00000505804 ANO8Q9HCE9 1232 aaPredicted RBP9.37□□□□□ -0.91
TOPBP1-204ENST00000505804 RIMBP2O15034 1052 aa9.35□□□□□ -0.91
TOPBP1-204ENST00000505804 PTGER2P43116 358 aa9.35□□□□□ -0.91
TOPBP1-204ENST00000505804 ZNF710Q8N1W2 664 aa9.35□□□□□ -0.91
TOPBP1-204ENST00000505804 RBM26Q5T8P6 1007 aaKnown RBP9.34□□□□□ -0.91
TOPBP1-204ENST00000505804 GPR153Q6NV75 609 aa9.34□□□□□ -0.91
TOPBP1-204ENST00000505804 KDM4FA0A1W2PPD8 638 aa9.33□□□□□ -0.92
TOPBP1-204ENST00000505804 ZNF316A6NFI3 1004 aaPredicted RBP9.33□□□□□ -0.92
TOPBP1-204ENST00000505804 SNPHO15079 494 aa9.33□□□□□ -0.92
TOPBP1-204ENST00000505804 NUDT7P0C024 238 aa9.33□□□□□ -0.92
TOPBP1-204ENST00000505804 ZSWIM6Q9HCJ5 1215 aa9.32□□□□□ -0.92
TOPBP1-204ENST00000505804 OSBPP22059 807 aa9.31□□□□□ -0.92
TOPBP1-204ENST00000505804 ZC3H15Q8WU90 426 aaKnown RBP9.28□□□□□ -0.92
TOPBP1-204ENST00000505804 PRIM1P49642 420 aaKnown RBP9.27□□□□□ -0.93
TOPBP1-204ENST00000505804 PHF14O94880 888 aa9.26□□□□□ -0.93
TOPBP1-204ENST00000505804 PCDHGA10Q9Y5H3 936 aa9.26□□□□□ -0.93
TOPBP1-204ENST00000505804 NUTM2FA1L443 756 aa9.25□□□□□ -0.93
TOPBP1-204ENST00000505804 HOXB1P14653 301 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-204ENST00000505804 GPIHBP1Q8IV16 184 aa9.25□□□□□ -0.93
TOPBP1-204ENST00000505804 LHX6Q9UPM6 363 aa9.25□□□□□ -0.93
TOPBP1-204ENST00000505804 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-204ENST00000505804 EPAS1Q99814 870 aa9.24□□□□□ -0.93
TOPBP1-204ENST00000505804 FOSBP53539 338 aa9.23□□□□□ -0.93
TOPBP1-204ENST00000505804 TYW1BQ6NUM6 668 aa9.23□□□□□ -0.93
TOPBP1-204ENST00000505804 ZNF454Q8N9F8 522 aa9.23□□□□□ -0.93
TOPBP1-204ENST00000505804 JPH4Q96JJ6 628 aa9.23□□□□□ -0.93
TOPBP1-204ENST00000505804 MAP3K7O43318 606 aa9.2□□□□□ -0.94
TOPBP1-204ENST00000505804 ST18O60284 1047 aa9.2□□□□□ -0.94
TOPBP1-204ENST00000505804 ZMYND10O75800 440 aa9.2□□□□□ -0.94
TOPBP1-204ENST00000505804 EN1Q05925 392 aaPredicted RBP9.2□□□□□ -0.94
TOPBP1-204ENST00000505804 ZDHHC16Q969W1 377 aa9.2□□□□□ -0.94
TOPBP1-204ENST00000505804 FAM163AQ96GL9 167 aaPredicted RBP9.2□□□□□ -0.94
TOPBP1-204ENST00000505804 FBXW7Q969H0 707 aa9.19□□□□□ -0.94
TOPBP1-204ENST00000505804 TSR1Q2NL82 804 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-204ENST00000505804 GPR37O15354 613 aa9.17□□□□□ -0.94
TOPBP1-204ENST00000505804 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
TOPBP1-204ENST00000505804 ADAM33Q9BZ11 813 aa9.17□□□□□ -0.94
TOPBP1-204ENST00000505804 CDHR5Q9HBB8 845 aa9.17□□□□□ -0.94
TOPBP1-204ENST00000505804 PPP4R3BQ5MIZ7 849 aa9.16□□□□□ -0.94
TOPBP1-204ENST00000505804 PSDA5PKW4 1024 aaPredicted RBP9.15□□□□□ -0.94
TOPBP1-204ENST00000505804 FCHSD2O94868 740 aa9.15□□□□□ -0.94
TOPBP1-204ENST00000505804 PTGDRQ13258 359 aa9.15□□□□□ -0.94
TOPBP1-204ENST00000505804 C6orf132Q5T0Z8 1188 aa9.15□□□□□ -0.94
TOPBP1-204ENST00000505804 KRI1Q8N9T8 703 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms