RNA–Protein interactions for RNA: ENST00000505614.1

NDFIP1-203, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 3

Gene NDFIP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-203ENST00000505614 BCANQ96GW7 911 aa11.71□□□□□ -0.53
NDFIP1-203ENST00000505614 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
NDFIP1-203ENST00000505614 P3H3Q8IVL6 736 aa11.69□□□□□ -0.54
NDFIP1-203ENST00000505614 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
NDFIP1-203ENST00000505614 MICALL2Q8IY33 904 aa11.68□□□□□ -0.54
NDFIP1-203ENST00000505614 TMEM121BQ9BXQ6 578 aaPredicted RBP11.66□□□□□ -0.54
NDFIP1-203ENST00000505614 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
NDFIP1-203ENST00000505614 LARP6Q9BRS8 491 aaKnown RBP11.63□□□□□ -0.55
NDFIP1-203ENST00000505614 NCKAP5LQ9HCH0 1330 aa11.62□□□□□ -0.55
NDFIP1-203ENST00000505614 MFSD10Q14728 455 aa11.61□□□□□ -0.55
NDFIP1-203ENST00000505614 TMC2Q8TDI7 906 aa11.61□□□□□ -0.55
NDFIP1-203ENST00000505614 DDX27Q96GQ7 796 aaKnown RBP11.61□□□□□ -0.55
NDFIP1-203ENST00000505614 GPHNQ9NQX3 736 aaPredicted RBP11.61□□□□□ -0.55
NDFIP1-203ENST00000505614 NBR1Q14596 966 aa11.59□□□□□ -0.55
NDFIP1-203ENST00000505614 E2F4Q16254 413 aa11.58□□□□□ -0.56
NDFIP1-203ENST00000505614 C3orf67Q6ZVT6 689 aa11.55□□□□□ -0.56
NDFIP1-203ENST00000505614 PPP1R15BQ5SWA1 713 aa11.53□□□□□ -0.56
NDFIP1-203ENST00000505614 ARHGEF1Q92888 912 aaKnown RBP11.53□□□□□ -0.56
NDFIP1-203ENST00000505614 FOXK1P85037 733 aa11.52□□□□□ -0.57
NDFIP1-203ENST00000505614 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
NDFIP1-203ENST00000505614 SLAIN1Q8ND83 568 aa11.51□□□□□ -0.57
NDFIP1-203ENST00000505614 POTEMA6NI47 508 aa11.5□□□□□ -0.57
NDFIP1-203ENST00000505614 FAM163AQ96GL9 167 aaPredicted RBP11.5□□□□□ -0.57
NDFIP1-203ENST00000505614 C2orf72A6NCS6 295 aa11.49□□□□□ -0.57
NDFIP1-203ENST00000505614 KIF3CO14782 793 aa11.49□□□□□ -0.57
NDFIP1-203ENST00000505614 CAMK2BQ13554 666 aa11.49□□□□□ -0.57
NDFIP1-203ENST00000505614 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.49□□□□□ -0.57
NDFIP1-203ENST00000505614 DSG2Q14126 1118 aa11.48□□□□□ -0.57
NDFIP1-203ENST00000505614 POTEGQ6S5H5 508 aa11.48□□□□□ -0.57
NDFIP1-203ENST00000505614 ARIH1Q9Y4X5 557 aaPredicted RBP11.48□□□□□ -0.57
NDFIP1-203ENST00000505614 PLPP6Q8IY26 295 aa11.46□□□□□ -0.57
NDFIP1-203ENST00000505614 LCE2DQ5TA82 110 aaPredicted RBP11.42□□□□□ -0.58
NDFIP1-203ENST00000505614 TMEM92Q6UXU6 159 aa11.42□□□□□ -0.58
NDFIP1-203ENST00000505614 TULP1O00294 542 aaPredicted RBP11.39□□□□□ -0.59
NDFIP1-203ENST00000505614 SPDYE16A6NNV3 312 aaPredicted RBP11.37□□□□□ -0.59
NDFIP1-203ENST00000505614 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
NDFIP1-203ENST00000505614 TBC1D12O60347 775 aa11.34□□□□□ -0.59
NDFIP1-203ENST00000505614 EMILIN3Q9NT22 766 aa11.34□□□□□ -0.59
NDFIP1-203ENST00000505614 MAP3K9P80192 1104 aa11.33□□□□□ -0.6
NDFIP1-203ENST00000505614 SMYD5Q6GMV2 418 aa11.33□□□□□ -0.6
NDFIP1-203ENST00000505614 SLC34A2O95436 690 aa11.32□□□□□ -0.6
NDFIP1-203ENST00000505614 DPYSL4O14531 572 aa11.31□□□□□ -0.6
NDFIP1-203ENST00000505614 SNPHO15079 494 aa11.31□□□□□ -0.6
NDFIP1-203ENST00000505614 ST18O60284 1047 aa11.31□□□□□ -0.6
NDFIP1-203ENST00000505614 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
NDFIP1-203ENST00000505614 PDIA6Q15084 440 aa11.29□□□□□ -0.6
NDFIP1-203ENST00000505614 PTCD2Q8WV60 388 aaKnown RBP11.29□□□□□ -0.6
NDFIP1-203ENST00000505614 PCDH10Q9P2E7 1040 aa11.29□□□□□ -0.6
NDFIP1-203ENST00000505614 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
NDFIP1-203ENST00000505614 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
NDFIP1-203ENST00000505614 SEMA3EO15041 775 aa11.27□□□□□ -0.61
NDFIP1-203ENST00000505614 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.61
NDFIP1-203ENST00000505614 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
NDFIP1-203ENST00000505614 RIMBP2O15034 1052 aa11.23□□□□□ -0.61
NDFIP1-203ENST00000505614 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
NDFIP1-203ENST00000505614 LMOD2Q6P5Q4 547 aa11.2□□□□□ -0.62
NDFIP1-203ENST00000505614 ZSWIM6Q9HCJ5 1215 aa11.2□□□□□ -0.62
NDFIP1-203ENST00000505614 EVI5O60447 810 aa11.19□□□□□ -0.62
NDFIP1-203ENST00000505614 PTGER2P43116 358 aa11.19□□□□□ -0.62
NDFIP1-203ENST00000505614 TPRNQ4KMQ1 711 aa11.19□□□□□ -0.62
NDFIP1-203ENST00000505614 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
NDFIP1-203ENST00000505614 PCDHGA4Q9Y5G9 962 aa11.18□□□□□ -0.62
NDFIP1-203ENST00000505614 ANO8Q9HCE9 1232 aaPredicted RBP11.17□□□□□ -0.62
NDFIP1-203ENST00000505614 ZNF710Q8N1W2 664 aa11.16□□□□□ -0.62
NDFIP1-203ENST00000505614 MARVELD3Q96A59 401 aa11.16□□□□□ -0.62
NDFIP1-203ENST00000505614 HOXB3P14651 431 aaPredicted RBP11.14□□□□□ -0.63
NDFIP1-203ENST00000505614 MLLT3P42568 568 aaPredicted RBP11.14□□□□□ -0.63
NDFIP1-203ENST00000505614 GRXCR2A6NFK2 248 aa11.12□□□□□ -0.63
NDFIP1-203ENST00000505614 EMP3P54852 163 aa11.12□□□□□ -0.63
NDFIP1-203ENST00000505614 EPAS1Q99814 870 aa11.09□□□□□ -0.63
NDFIP1-203ENST00000505614 PRKCSHP14314 528 aaPredicted RBP11.08□□□□□ -0.64
NDFIP1-203ENST00000505614 DDX12PQ92771 950 aa11.08□□□□□ -0.64
NDFIP1-203ENST00000505614 KDM4FA0A1W2PPD8 638 aa11.07□□□□□ -0.64
NDFIP1-203ENST00000505614 PHF14O94880 888 aa11.07□□□□□ -0.64
NDFIP1-203ENST00000505614 ARSIQ5FYB1 569 aa11.07□□□□□ -0.64
NDFIP1-203ENST00000505614 GPR153Q6NV75 609 aa11.07□□□□□ -0.64
NDFIP1-203ENST00000505614 RBM26Q5T8P6 1007 aaKnown RBP11.05□□□□□ -0.64
NDFIP1-203ENST00000505614 GPIHBP1Q8IV16 184 aa11.05□□□□□ -0.64
NDFIP1-203ENST00000505614 PSDA5PKW4 1024 aaPredicted RBP11.04□□□□□ -0.64
NDFIP1-203ENST00000505614 NUDT7P0C024 238 aa11.04□□□□□ -0.64
NDFIP1-203ENST00000505614 OSBPP22059 807 aa11.04□□□□□ -0.64
NDFIP1-203ENST00000505614 FBXW7Q969H0 707 aa11.04□□□□□ -0.64
NDFIP1-203ENST00000505614 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
NDFIP1-203ENST00000505614 TYW1BQ6NUM6 668 aa11.03□□□□□ -0.64
NDFIP1-203ENST00000505614 ZC3H15Q8WU90 426 aaKnown RBP11.03□□□□□ -0.64
NDFIP1-203ENST00000505614 JPH4Q96JJ6 628 aa11.03□□□□□ -0.64
NDFIP1-203ENST00000505614 FAM205CA6NFA0 338 aa11.02□□□□□ -0.65
NDFIP1-203ENST00000505614 HS3ST6Q96QI5 342 aa11.01□□□□□ -0.65
NDFIP1-203ENST00000505614 NUTM2FA1L443 756 aa11□□□□□ -0.65
NDFIP1-203ENST00000505614 FOSBP53539 338 aa11□□□□□ -0.65
NDFIP1-203ENST00000505614 PCDHGA10Q9Y5H3 936 aa11□□□□□ -0.65
NDFIP1-203ENST00000505614 EN1Q05925 392 aaPredicted RBP10.98□□□□□ -0.65
NDFIP1-203ENST00000505614 KHSRPQ92945 711 aaKnown RBP eCLIP10.98□□□□□ -0.653e-7■■■□□ 16.8
NDFIP1-203ENST00000505614 ZMYND10O75800 440 aa10.97□□□□□ -0.65
NDFIP1-203ENST00000505614 ZNF454Q8N9F8 522 aa10.97□□□□□ -0.65
NDFIP1-203ENST00000505614 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
NDFIP1-203ENST00000505614 FCHSD2O94868 740 aa10.96□□□□□ -0.65
NDFIP1-203ENST00000505614 POTEB3A0JP26 581 aa10.95□□□□□ -0.66
NDFIP1-203ENST00000505614 MAP3K7O43318 606 aa10.95□□□□□ -0.66
NDFIP1-203ENST00000505614 PPP4R3BQ5MIZ7 849 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms