RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-208ENST00000504813 LOC105371045A0A1W2PR82 267 aa23.65■■□□□ 1.38
CNBP-208ENST00000504813 EFCAB2Q5VUJ9 269 aa23.65■■□□□ 1.38
CNBP-208ENST00000504813 ARHGAP5Q13017 1502 aa23.65■■□□□ 1.38
CNBP-208ENST00000504813 SCAPERQ9BY12 1400 aa23.65■■□□□ 1.38
CNBP-208ENST00000504813 CDC42BPAQ5VT25 1732 aa23.64■■□□□ 1.38
CNBP-208ENST00000504813 POGZQ7Z3K3 1410 aa23.62■■□□□ 1.37
CNBP-208ENST00000504813 MAGI2Q86UL8 1455 aa23.59■■□□□ 1.37
CNBP-208ENST00000504813 ZFYVE16Q7Z3T8 1539 aa23.58■■□□□ 1.36
CNBP-208ENST00000504813 BCORL1Q5H9F3 1711 aa23.58■■□□□ 1.36
CNBP-208ENST00000504813 ADAMTSL3P82987 1691 aa23.57■■□□□ 1.36
CNBP-208ENST00000504813 YEATS2Q9ULM3 1422 aa23.56■■□□□ 1.36
CNBP-208ENST00000504813 SIGLEC1Q9BZZ2 1709 aa23.55■■□□□ 1.36
CNBP-208ENST00000504813 KDM5CP41229 1560 aa23.54■■□□□ 1.36
CNBP-208ENST00000504813 ZNF518AQ6AHZ1 1483 aa23.54■■□□□ 1.36
CNBP-208ENST00000504813 ABCC1P33527 1531 aa23.54■■□□□ 1.36
CNBP-208ENST00000504813 ITSN2Q9NZM3 1697 aa23.53■■□□□ 1.36
CNBP-208ENST00000504813 GPATCH8Q9UKJ3 1502 aaKnown RBP23.51■■□□□ 1.35
CNBP-208ENST00000504813 MTUS2Q5JR59 1369 aa23.51■■□□□ 1.35
CNBP-208ENST00000504813 EHBP1L1Q8N3D4 1523 aa23.5■■□□□ 1.35
CNBP-208ENST00000504813 ARHGEF12Q9NZN5 1544 aa23.5■■□□□ 1.35
CNBP-208ENST00000504813 SAMD9LQ8IVG5 1584 aa23.49■■□□□ 1.35
CNBP-208ENST00000504813 ARID4BQ4LE39 1312 aaPredicted RBP23.48■■□□□ 1.35
CNBP-208ENST00000504813 AFAP1Q8N556 730 aa23.48■■□□□ 1.35
CNBP-208ENST00000504813 HECW2Q9P2P5 1572 aa23.47■■□□□ 1.35
CNBP-208ENST00000504813 MADDQ8WXG6 1647 aa23.47■■□□□ 1.35
CNBP-208ENST00000504813 VPS8Q8N3P4 1428 aa23.47■■□□□ 1.35
CNBP-208ENST00000504813 ATP10AO60312 1499 aa23.45■■□□□ 1.34
CNBP-208ENST00000504813 TRAPPC8Q9Y2L5 1435 aa23.45■■□□□ 1.34
CNBP-208ENST00000504813 TIAM1Q13009 1591 aa23.44■■□□□ 1.34
CNBP-208ENST00000504813 PTPRMP28827 1452 aa23.43■■□□□ 1.34
CNBP-208ENST00000504813 CCNB3Q8WWL7 1395 aa23.43■■□□□ 1.34
CNBP-208ENST00000504813 MLH3Q9UHC1 1453 aa23.42■■□□□ 1.34
CNBP-208ENST00000504813 C9orf84Q5VXU9 1444 aa23.42■■□□□ 1.34
CNBP-208ENST00000504813 DIP2CQ9Y2E4 1556 aa23.42■■□□□ 1.34
CNBP-208ENST00000504813 ABCA6Q8N139 1617 aa23.41■■□□□ 1.34
CNBP-208ENST00000504813 RIMS1Q86UR5 1692 aaKnown RBP23.41■■□□□ 1.34
CNBP-208ENST00000504813 KIDINS220Q9ULH0 1771 aa23.4■■□□□ 1.34
CNBP-208ENST00000504813 SYCP2Q9BX26 1530 aa23.4■■□□□ 1.34
CNBP-208ENST00000504813 ZNF777Q9ULD5 760 aaPredicted RBP23.4■■□□□ 1.34
CNBP-208ENST00000504813 SUPT6HQ7KZ85 1726 aaKnown RBP23.4■■□□□ 1.34
CNBP-208ENST00000504813 CFDP1Q9UEE9 299 aaPredicted RBP23.38■■□□□ 1.33
CNBP-208ENST00000504813 REREQ9P2R6 1566 aa23.38■■□□□ 1.33
CNBP-208ENST00000504813 KIAA1107Q9UPP5 1409 aa23.36■■□□□ 1.33
CNBP-208ENST00000504813 FER1L4A9Z1Z3 1794 aa23.36■■□□□ 1.33
CNBP-208ENST00000504813 PLEKHH2Q8IVE3 1493 aa23.35■■□□□ 1.33
CNBP-208ENST00000504813 NCOA2Q15596 1464 aa23.34■■□□□ 1.33
CNBP-208ENST00000504813 MYT1LQ9UL68 1186 aa23.34■■□□□ 1.33
CNBP-208ENST00000504813 HNRNPMP52272 730 aaKnown RBP eCLIP23.33■■□□□ 1.33
CNBP-208ENST00000504813 MAP3K1Q13233 1512 aa23.33■■□□□ 1.33
CNBP-208ENST00000504813 LRRC9Q6ZRR7 1453 aa23.33■■□□□ 1.33
CNBP-208ENST00000504813 MLECQ14165 292 aa23.3■■□□□ 1.32
CNBP-208ENST00000504813 ZNF644Q9H582 1327 aaPredicted RBP23.29■■□□□ 1.32
CNBP-208ENST00000504813 INO80Q9ULG1 1556 aaPredicted RBP23.29■■□□□ 1.32
CNBP-208ENST00000504813 AGLP35573 1532 aa23.28■■□□□ 1.32
CNBP-208ENST00000504813 ATP7AQ04656 1500 aa23.27■■□□□ 1.32
CNBP-208ENST00000504813 MBD5Q9P267 1494 aa23.26■■□□□ 1.31
CNBP-208ENST00000504813 SPAG9O60271 1321 aaKnown RBP23.26■■□□□ 1.31
CNBP-208ENST00000504813 KANK4Q5T7N3 995 aaPredicted RBP23.24■■□□□ 1.31
CNBP-208ENST00000504813 CAMSAP2Q08AD1 1489 aa23.22■■□□□ 1.31
CNBP-208ENST00000504813 ADGBQ8N7X0 1667 aa23.19■■□□□ 1.3
CNBP-208ENST00000504813 PLXNC1O60486 1568 aa23.19■■□□□ 1.3
CNBP-208ENST00000504813 LMTK3Q96Q04 1460 aa23.17■■□□□ 1.3
CNBP-208ENST00000504813 CCDC141Q6ZP82 1450 aa23.16■■□□□ 1.3
CNBP-208ENST00000504813 RTEL1-TNFRSF6BF6WH68 1400 aa23.15■■□□□ 1.3
CNBP-208ENST00000504813 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
CNBP-208ENST00000504813 A2MP01023 1474 aa23.15■■□□□ 1.3
CNBP-208ENST00000504813 ARHGEF5Q12774 1597 aa23.15■■□□□ 1.3
CNBP-208ENST00000504813 C3P01024 1663 aa23.14■■□□□ 1.29
CNBP-208ENST00000504813 MYOM3Q5VTT5 1437 aa23.12■■□□□ 1.29
CNBP-208ENST00000504813 RSPH4AQ5TD94 716 aa23.12■■□□□ 1.29
CNBP-208ENST00000504813 APLP2Q06481 763 aa23.11■■□□□ 1.29
CNBP-208ENST00000504813 CEBPAP49715 358 aaPredicted RBP23.1■■□□□ 1.29
CNBP-208ENST00000504813 MIA2Q96PC5 1412 aa23.1■■□□□ 1.29
CNBP-208ENST00000504813 PREX1Q8TCU6 1659 aa23.1■■□□□ 1.29
CNBP-208ENST00000504813 MROH2AA6NES4 1674 aa23.08■■□□□ 1.29
CNBP-208ENST00000504813 SETD1BQ9UPS6 1966 aaKnown RBP23.08■■□□□ 1.29
CNBP-208ENST00000504813 CNTLNQ9NXG0 1405 aa23.06■■□□□ 1.28
CNBP-208ENST00000504813 CLTCQ00610 1675 aaKnown RBP23.04■■□□□ 1.28
CNBP-208ENST00000504813 ESF1Q9H501 851 aaKnown RBP23.04■■□□□ 1.28
CNBP-208ENST00000504813 DHX29Q7Z478 1369 aaKnown RBP23.04■■□□□ 1.28
CNBP-208ENST00000504813 MAST1Q9Y2H9 1570 aa23.04■■□□□ 1.28
CNBP-208ENST00000504813 PTPN23Q9H3S7 1636 aa23.01■■□□□ 1.27
CNBP-208ENST00000504813 TSPY4P0CV99 314 aa23.01■■□□□ 1.27
CNBP-208ENST00000504813 TSPY10P0CW01 314 aa23.01■■□□□ 1.27
CNBP-208ENST00000504813 HSPA2P54652 639 aa23■■□□□ 1.27
CNBP-208ENST00000504813 GGT6Q6P531 493 aa22.98■■□□□ 1.27
CNBP-208ENST00000504813 CROCC2H7BZ55 1655 aa22.97■■□□□ 1.27
CNBP-208ENST00000504813 ZMYM3Q14202 1370 aa22.97■■□□□ 1.27
CNBP-208ENST00000504813 PPP6R1Q9UPN7 881 aa22.96■■□□□ 1.27
CNBP-208ENST00000504813 UHRF1BP1Q6BDS2 1440 aa22.95■■□□□ 1.26
CNBP-208ENST00000504813 FGD6Q6ZV73 1430 aa22.95■■□□□ 1.26
CNBP-208ENST00000504813 TCOF1Q13428 1488 aaKnown RBP22.95■■□□□ 1.26
CNBP-208ENST00000504813 NPATQ14207 1427 aa22.93■■□□□ 1.26
CNBP-208ENST00000504813 KIF3BO15066 747 aa22.92■■□□□ 1.26
CNBP-208ENST00000504813 DNMT1P26358 1616 aaKnown RBP22.92■■□□□ 1.26
CNBP-208ENST00000504813 ABCC5O15440 1437 aa22.91■■□□□ 1.26
CNBP-208ENST00000504813 SHANK2Q9UPX8 1470 aa22.9■■□□□ 1.26
CNBP-208ENST00000504813 EIF2AK4Q9P2K8 1649 aaKnown RBP22.9■■□□□ 1.26
CNBP-208ENST00000504813 STRCQ7RTU9 1775 aa22.9■■□□□ 1.26
CNBP-208ENST00000504813 FAM135AQ9P2D6 1515 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms