RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 CEP162Q5TB80 1403 aa22.14■■□□□ 1.13
HOXC6-203ENST00000504315 POGZQ7Z3K3 1410 aa22.11■■□□□ 1.13
HOXC6-203ENST00000504315 ADAMTSL3P82987 1691 aa22.11■■□□□ 1.13
HOXC6-203ENST00000504315 BCORL1Q5H9F3 1711 aa22.09■■□□□ 1.13
HOXC6-203ENST00000504315 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
HOXC6-203ENST00000504315 MAGI2Q86UL8 1455 aa22.09■■□□□ 1.13
HOXC6-203ENST00000504315 SCAPERQ9BY12 1400 aa22.07■■□□□ 1.12
HOXC6-203ENST00000504315 EFCAB2Q5VUJ9 269 aa22.07■■□□□ 1.12
HOXC6-203ENST00000504315 ZFYVE16Q7Z3T8 1539 aa22.06■■□□□ 1.12
HOXC6-203ENST00000504315 KDM5CP41229 1560 aa22.05■■□□□ 1.12
HOXC6-203ENST00000504315 SIGLEC1Q9BZZ2 1709 aa22.05■■□□□ 1.12
HOXC6-203ENST00000504315 ITSN2Q9NZM3 1697 aa22.04■■□□□ 1.12
HOXC6-203ENST00000504315 ABCC1P33527 1531 aa22.03■■□□□ 1.12
HOXC6-203ENST00000504315 ZNF518AQ6AHZ1 1483 aa22.02■■□□□ 1.12
HOXC6-203ENST00000504315 YEATS2Q9ULM3 1422 aa22■■□□□ 1.11
HOXC6-203ENST00000504315 EHBP1L1Q8N3D4 1523 aa21.98■■□□□ 1.11
HOXC6-203ENST00000504315 HECW2Q9P2P5 1572 aa21.98■■□□□ 1.11
HOXC6-203ENST00000504315 GPATCH8Q9UKJ3 1502 aaKnown RBP21.97■■□□□ 1.11
HOXC6-203ENST00000504315 MADDQ8WXG6 1647 aa21.97■■□□□ 1.11
HOXC6-203ENST00000504315 SAMD9LQ8IVG5 1584 aa21.96■■□□□ 1.11
HOXC6-203ENST00000504315 ARHGEF12Q9NZN5 1544 aa21.96■■□□□ 1.11
HOXC6-203ENST00000504315 LOC105371045A0A1W2PR82 267 aa21.95■■□□□ 1.1
HOXC6-203ENST00000504315 MTUS2Q5JR59 1369 aa21.93■■□□□ 1.1
HOXC6-203ENST00000504315 ATP10AO60312 1499 aa21.92■■□□□ 1.1
HOXC6-203ENST00000504315 VPS8Q8N3P4 1428 aa21.92■■□□□ 1.1
HOXC6-203ENST00000504315 RIMS1Q86UR5 1692 aaKnown RBP21.91■■□□□ 1.1
HOXC6-203ENST00000504315 TIAM1Q13009 1591 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 REREQ9P2R6 1566 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 DIP2CQ9Y2E4 1556 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 PTPRMP28827 1452 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 MLH3Q9UHC1 1453 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 C9orf84Q5VXU9 1444 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 KIDINS220Q9ULH0 1771 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 ABCA6Q8N139 1617 aa21.91■■□□□ 1.1
HOXC6-203ENST00000504315 FER1L4A9Z1Z3 1794 aa21.9■■□□□ 1.1
HOXC6-203ENST00000504315 TRAPPC8Q9Y2L5 1435 aa21.89■■□□□ 1.1
HOXC6-203ENST00000504315 SUPT6HQ7KZ85 1726 aaKnown RBP21.89■■□□□ 1.1
HOXC6-203ENST00000504315 AFAP1Q8N556 730 aa21.88■■□□□ 1.09
HOXC6-203ENST00000504315 SYCP2Q9BX26 1530 aa21.88■■□□□ 1.09
HOXC6-203ENST00000504315 ARID4BQ4LE39 1312 aaPredicted RBP21.87■■□□□ 1.09
HOXC6-203ENST00000504315 CCNB3Q8WWL7 1395 aa21.87■■□□□ 1.09
HOXC6-203ENST00000504315 PLEKHH2Q8IVE3 1493 aa21.85■■□□□ 1.09
HOXC6-203ENST00000504315 KIAA1107Q9UPP5 1409 aa21.85■■□□□ 1.09
HOXC6-203ENST00000504315 MAP3K1Q13233 1512 aa21.84■■□□□ 1.09
HOXC6-203ENST00000504315 INO80Q9ULG1 1556 aaPredicted RBP21.81■■□□□ 1.08
HOXC6-203ENST00000504315 AGLP35573 1532 aa21.8■■□□□ 1.08
HOXC6-203ENST00000504315 NCOA2Q15596 1464 aa21.8■■□□□ 1.08
HOXC6-203ENST00000504315 CFDP1Q9UEE9 299 aaPredicted RBP21.8■■□□□ 1.08
HOXC6-203ENST00000504315 LRRC9Q6ZRR7 1453 aa21.78■■□□□ 1.08
HOXC6-203ENST00000504315 ZNF777Q9ULD5 760 aaPredicted RBP21.77■■□□□ 1.08
HOXC6-203ENST00000504315 ATP7AQ04656 1500 aa21.76■■□□□ 1.07
HOXC6-203ENST00000504315 MBD5Q9P267 1494 aa21.75■■□□□ 1.07
HOXC6-203ENST00000504315 HNRNPMP52272 730 aaKnown RBP eCLIP21.73■■□□□ 1.07
HOXC6-203ENST00000504315 ADGBQ8N7X0 1667 aa21.72■■□□□ 1.07
HOXC6-203ENST00000504315 SETD1BQ9UPS6 1966 aaKnown RBP21.72■■□□□ 1.07
HOXC6-203ENST00000504315 PLXNC1O60486 1568 aa21.72■■□□□ 1.07
HOXC6-203ENST00000504315 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
HOXC6-203ENST00000504315 SPAG9O60271 1321 aaKnown RBP21.7■■□□□ 1.06
HOXC6-203ENST00000504315 CAMSAP2Q08AD1 1489 aa21.7■■□□□ 1.06
HOXC6-203ENST00000504315 LMTK3Q96Q04 1460 aa21.7■■□□□ 1.06
HOXC6-203ENST00000504315 MLECQ14165 292 aa21.69■■□□□ 1.06
HOXC6-203ENST00000504315 ZNF644Q9H582 1327 aaPredicted RBP21.68■■□□□ 1.06
HOXC6-203ENST00000504315 C3P01024 1663 aa21.67■■□□□ 1.06
HOXC6-203ENST00000504315 ARHGEF5Q12774 1597 aa21.66■■□□□ 1.06
HOXC6-203ENST00000504315 PREX1Q8TCU6 1659 aa21.66■■□□□ 1.06
HOXC6-203ENST00000504315 RTEL1-TNFRSF6BF6WH68 1400 aa21.65■■□□□ 1.06
HOXC6-203ENST00000504315 KANK4Q5T7N3 995 aaPredicted RBP21.65■■□□□ 1.06
HOXC6-203ENST00000504315 CCDC141Q6ZP82 1450 aa21.64■■□□□ 1.06
HOXC6-203ENST00000504315 MROH2AA6NES4 1674 aa21.64■■□□□ 1.05
HOXC6-203ENST00000504315 A2MP01023 1474 aa21.64■■□□□ 1.05
HOXC6-203ENST00000504315 MYOM3Q5VTT5 1437 aa21.6■■□□□ 1.05
HOXC6-203ENST00000504315 MIA2Q96PC5 1412 aa21.6■■□□□ 1.05
HOXC6-203ENST00000504315 RSPH4AQ5TD94 716 aa21.59■■□□□ 1.05
HOXC6-203ENST00000504315 CNTLNQ9NXG0 1405 aa21.59■■□□□ 1.05
HOXC6-203ENST00000504315 MAST1Q9Y2H9 1570 aa21.57■■□□□ 1.04
HOXC6-203ENST00000504315 CLTCQ00610 1675 aaKnown RBP21.56■■□□□ 1.04
HOXC6-203ENST00000504315 CEBPAP49715 358 aaPredicted RBP21.52■■□□□ 1.04
HOXC6-203ENST00000504315 CROCC2H7BZ55 1655 aa21.52■■□□□ 1.04
HOXC6-203ENST00000504315 DHX29Q7Z478 1369 aaKnown RBP21.51■■□□□ 1.03
HOXC6-203ENST00000504315 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
HOXC6-203ENST00000504315 PTPN23Q9H3S7 1636 aa21.51■■□□□ 1.03
HOXC6-203ENST00000504315 APLP2Q06481 763 aa21.5■■□□□ 1.03
HOXC6-203ENST00000504315 FAM135AQ9P2D6 1515 aa21.49■■□□□ 1.03
HOXC6-203ENST00000504315 ESF1Q9H501 851 aaKnown RBP21.48■■□□□ 1.03
HOXC6-203ENST00000504315 NPATQ14207 1427 aa21.46■■□□□ 1.03
HOXC6-203ENST00000504315 PPP6R1Q9UPN7 881 aa21.46■■□□□ 1.03
HOXC6-203ENST00000504315 STRCQ7RTU9 1775 aa21.46■■□□□ 1.03
HOXC6-203ENST00000504315 UHRF1BP1Q6BDS2 1440 aa21.46■■□□□ 1.03
HOXC6-203ENST00000504315 TCOF1Q13428 1488 aaKnown RBP21.45■■□□□ 1.03
HOXC6-203ENST00000504315 EIF2AK4Q9P2K8 1649 aaKnown RBP21.45■■□□□ 1.02
HOXC6-203ENST00000504315 TSPY4P0CV99 314 aa21.45■■□□□ 1.02
HOXC6-203ENST00000504315 TSPY10P0CW01 314 aa21.45■■□□□ 1.02
HOXC6-203ENST00000504315 ZMYM3Q14202 1370 aa21.45■■□□□ 1.02
HOXC6-203ENST00000504315 RNF17Q9BXT8 1623 aaKnown RBP21.44■■□□□ 1.02
HOXC6-203ENST00000504315 HSPA2P54652 639 aa21.44■■□□□ 1.02
HOXC6-203ENST00000504315 FGD6Q6ZV73 1430 aa21.44■■□□□ 1.02
HOXC6-203ENST00000504315 SHANK2Q9UPX8 1470 aa21.44■■□□□ 1.02
HOXC6-203ENST00000504315 DNMT1P26358 1616 aaKnown RBP21.44■■□□□ 1.02
HOXC6-203ENST00000504315 ZNF142P52746 1687 aaPredicted RBP21.43■■□□□ 1.02
HOXC6-203ENST00000504315 KDM5DQ9BY66 1539 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms