RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 GPHNQ9NQX3 736 aaPredicted RBP14.18□□□□□ -0.14
NEDD4-203ENST00000502612 BOLA1Q9Y3E2 137 aa14.18□□□□□ -0.14
NEDD4-203ENST00000502612 POTEIP0CG38 1075 aa14.17□□□□□ -0.14
NEDD4-203ENST00000502612 PPP1R15BQ5SWA1 713 aa14.17□□□□□ -0.14
NEDD4-203ENST00000502612 TMEM121BQ9BXQ6 578 aaPredicted RBP14.16□□□□□ -0.14
NEDD4-203ENST00000502612 POTEFA5A3E0 1075 aa14.15□□□□□ -0.14
NEDD4-203ENST00000502612 CAMK2BQ13554 666 aa14.15□□□□□ -0.14
NEDD4-203ENST00000502612 SEMA3EO15041 775 aa14.14□□□□□ -0.15
NEDD4-203ENST00000502612 DSG2Q14126 1118 aa14.14□□□□□ -0.15
NEDD4-203ENST00000502612 SEC24BO95487 1268 aa14.12□□□□□ -0.15
NEDD4-203ENST00000502612 SP7Q8TDD2 431 aaPredicted RBP14.1□□□□□ -0.15
NEDD4-203ENST00000502612 TMC2Q8TDI7 906 aa14.1□□□□□ -0.15
NEDD4-203ENST00000502612 C2orf72A6NCS6 295 aa14.09□□□□□ -0.15
NEDD4-203ENST00000502612 G3V3G9 751 aa14.09□□□□□ -0.15
NEDD4-203ENST00000502612 SLC39A7Q92504 469 aa14.09□□□□□ -0.15
NEDD4-203ENST00000502612 LMOD2Q6P5Q4 547 aa14.08□□□□□ -0.16
NEDD4-203ENST00000502612 TMEM92Q6UXU6 159 aa14.08□□□□□ -0.16
NEDD4-203ENST00000502612 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.08□□□□□ -0.16
NEDD4-203ENST00000502612 METRNQ9UJH8 293 aa14.08□□□□□ -0.16
NEDD4-203ENST00000502612 KIF3CO14782 793 aa14.07□□□□□ -0.16
NEDD4-203ENST00000502612 EMILIN3Q9NT22 766 aa14.07□□□□□ -0.16
NEDD4-203ENST00000502612 TESPA1A2RU30 521 aaPredicted RBP14.06□□□□□ -0.16
NEDD4-203ENST00000502612 ARIH1Q9Y4X5 557 aaPredicted RBP14.06□□□□□ -0.16
NEDD4-203ENST00000502612 FOXK1P85037 733 aa14.05□□□□□ -0.16
NEDD4-203ENST00000502612 L3MBTL3Q96JM7 780 aaPredicted RBP14.05□□□□□ -0.16
NEDD4-203ENST00000502612 C7P10643 843 aa14.03□□□□□ -0.16
NEDD4-203ENST00000502612 PLPP6Q8IY26 295 aa14.03□□□□□ -0.16
NEDD4-203ENST00000502612 DPYSL4O14531 572 aa14.02□□□□□ -0.17
NEDD4-203ENST00000502612 MLLT3P42568 568 aaPredicted RBP13.96□□□□□ -0.17
NEDD4-203ENST00000502612 TULP1O00294 542 aaPredicted RBP13.93□□□□□ -0.18
NEDD4-203ENST00000502612 UPF1Q92900 1129 aaKnown RBP eCLIP13.91□□□□□ -0.18
NEDD4-203ENST00000502612 PDIA6Q15084 440 aa13.9□□□□□ -0.18
NEDD4-203ENST00000502612 C3orf67Q6ZVT6 689 aa13.89□□□□□ -0.19
NEDD4-203ENST00000502612 ZC3H15Q8WU90 426 aaKnown RBP13.88□□□□□ -0.19
NEDD4-203ENST00000502612 RBM26Q5T8P6 1007 aaKnown RBP13.85□□□□□ -0.19
NEDD4-203ENST00000502612 SPDYE16A6NNV3 312 aaPredicted RBP13.84□□□□□ -0.19
NEDD4-203ENST00000502612 SMYD5Q6GMV2 418 aa13.84□□□□□ -0.19
NEDD4-203ENST00000502612 MAP3K9P80192 1104 aa13.83□□□□□ -0.2
NEDD4-203ENST00000502612 OXER1Q8TDS5 423 aa13.83□□□□□ -0.2
NEDD4-203ENST00000502612 POTEJP0CG39 1038 aa13.78□□□□□ -0.2
NEDD4-203ENST00000502612 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.77□□□□□ -0.21
NEDD4-203ENST00000502612 GRXCR2A6NFK2 248 aa13.75□□□□□ -0.21
NEDD4-203ENST00000502612 POTEB2H3BUK9 544 aa13.75□□□□□ -0.21
NEDD4-203ENST00000502612 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
NEDD4-203ENST00000502612 SLC24A3Q9HC58 644 aa13.73□□□□□ -0.21
NEDD4-203ENST00000502612 EVI5O60447 810 aa13.72□□□□□ -0.21
NEDD4-203ENST00000502612 ZMYND10O75800 440 aa13.72□□□□□ -0.21
NEDD4-203ENST00000502612 DDX12PQ92771 950 aa13.72□□□□□ -0.21
NEDD4-203ENST00000502612 PTCD2Q8WV60 388 aaKnown RBP13.71□□□□□ -0.21
NEDD4-203ENST00000502612 TBC1D12O60347 775 aa13.67□□□□□ -0.22
NEDD4-203ENST00000502612 SLC34A2O95436 690 aa13.67□□□□□ -0.22
NEDD4-203ENST00000502612 OSBPP22059 807 aa13.67□□□□□ -0.22
NEDD4-203ENST00000502612 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
NEDD4-203ENST00000502612 GPR37O15354 613 aa13.65□□□□□ -0.22
NEDD4-203ENST00000502612 PTGER2P43116 358 aa13.65□□□□□ -0.22
NEDD4-203ENST00000502612 BARGINQ6ZT62 677 aa13.65□□□□□ -0.22
NEDD4-203ENST00000502612 PCDHGA4Q9Y5G9 962 aa13.62□□□□□ -0.23
NEDD4-203ENST00000502612 NUTM2FA1L443 756 aa13.6□□□□□ -0.23
NEDD4-203ENST00000502612 BRPF1P55201 1214 aaPredicted RBP13.6□□□□□ -0.23
NEDD4-203ENST00000502612 ANO8Q9HCE9 1232 aaPredicted RBP13.59□□□□□ -0.23
NEDD4-203ENST00000502612 SLAIN1Q8ND83 568 aa13.58□□□□□ -0.24
NEDD4-203ENST00000502612 ZNF316A6NFI3 1004 aaPredicted RBP13.56□□□□□ -0.24
NEDD4-203ENST00000502612 HOXB3P14651 431 aaPredicted RBP13.56□□□□□ -0.24
NEDD4-203ENST00000502612 KHSRPQ92945 711 aaKnown RBP eCLIP13.56□□□□□ -0.243e-7■■□□□ 14.5
NEDD4-203ENST00000502612 KRI1Q8N9T8 703 aaKnown RBP13.54□□□□□ -0.24
NEDD4-203ENST00000502612 KDM4FA0A1W2PPD8 638 aa13.53□□□□□ -0.24
NEDD4-203ENST00000502612 NEUROD2Q15784 382 aa13.53□□□□□ -0.24
NEDD4-203ENST00000502612 CDHR5Q9HBB8 845 aa13.52□□□□□ -0.25
NEDD4-203ENST00000502612 SCUBE2Q9NQ36 999 aa13.52□□□□□ -0.25
NEDD4-203ENST00000502612 FECHP22830 423 aa13.51□□□□□ -0.25
NEDD4-203ENST00000502612 ARSIQ5FYB1 569 aa13.5□□□□□ -0.25
NEDD4-203ENST00000502612 AK7Q96M32 723 aa13.5□□□□□ -0.25
NEDD4-203ENST00000502612 PCDHGA10Q9Y5H3 936 aa13.5□□□□□ -0.25
NEDD4-203ENST00000502612 PHF14O94880 888 aa13.49□□□□□ -0.25
NEDD4-203ENST00000502612 NUDT7P0C024 238 aa13.49□□□□□ -0.25
NEDD4-203ENST00000502612 RBM33Q96EV2 1170 aaKnown RBP13.49□□□□□ -0.25
NEDD4-203ENST00000502612 EN1Q05925 392 aaPredicted RBP13.48□□□□□ -0.25
NEDD4-203ENST00000502612 DOK7Q18PE1 504 aa13.48□□□□□ -0.25
NEDD4-203ENST00000502612 FCHSD2O94868 740 aa13.46□□□□□ -0.25
NEDD4-203ENST00000502612 TSR1Q2NL82 804 aaKnown RBP13.46□□□□□ -0.25
NEDD4-203ENST00000502612 GNPATO15228 680 aa13.45□□□□□ -0.26
NEDD4-203ENST00000502612 MAP3K7O43318 606 aa13.45□□□□□ -0.26
NEDD4-203ENST00000502612 PTGDRQ13258 359 aa13.45□□□□□ -0.26
NEDD4-203ENST00000502612 MAMSTRQ6ZN01 415 aa13.45□□□□□ -0.26
NEDD4-203ENST00000502612 EPAS1Q99814 870 aa13.45□□□□□ -0.26
NEDD4-203ENST00000502612 TRIM66O15016 1216 aa13.44□□□□□ -0.26
NEDD4-203ENST00000502612 GPR153Q6NV75 609 aa13.44□□□□□ -0.26
NEDD4-203ENST00000502612 GPBP1L1Q9HC44 474 aaPredicted RBP13.44□□□□□ -0.26
NEDD4-203ENST00000502612 HIC1Q14526 733 aa13.43□□□□□ -0.26
NEDD4-203ENST00000502612 CCDC102AQ96A19 550 aa13.43□□□□□ -0.26
NEDD4-203ENST00000502612 JPH4Q96JJ6 628 aa13.43□□□□□ -0.26
NEDD4-203ENST00000502612 FOSBP53539 338 aa13.42□□□□□ -0.26
NEDD4-203ENST00000502612 MAP2K5Q13163 448 aa13.42□□□□□ -0.26
NEDD4-203ENST00000502612 TYW1BQ6NUM6 668 aa13.42□□□□□ -0.26
NEDD4-203ENST00000502612 NPDC1Q9NQX5 325 aaPredicted RBP13.42□□□□□ -0.26
NEDD4-203ENST00000502612 TMEM132AQ24JP5 1023 aa13.41□□□□□ -0.26
NEDD4-203ENST00000502612 ZNF454Q8N9F8 522 aa13.4□□□□□ -0.26
NEDD4-203ENST00000502612 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
NEDD4-203ENST00000502612 ZNF710Q8N1W2 664 aa13.39□□□□□ -0.27
NEDD4-203ENST00000502612 IRF6O14896 467 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms