RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 PDE4DQ08499 809 aa5.57□□□□□ -1.52
SUB1-202ENST00000502453 ARHGEF1Q92888 912 aaKnown RBP5.57□□□□□ -1.52
SUB1-202ENST00000502453 RSPH4AQ5TD94 716 aa5.56□□□□□ -1.52
SUB1-202ENST00000502453 MNX1P50219 401 aaPredicted RBP5.55□□□□□ -1.52
SUB1-202ENST00000502453 PDE4CQ08493 712 aa5.55□□□□□ -1.52
SUB1-202ENST00000502453 ZBTB47Q9UFB7 747 aaPredicted RBP5.55□□□□□ -1.52
SUB1-202ENST00000502453 CWC22Q9HCG8 908 aaKnown RBP5.55□□□□□ -1.52
SUB1-202ENST00000502453 ARID4BQ4LE39 1312 aaPredicted RBP5.54□□□□□ -1.52
SUB1-202ENST00000502453 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.54□□□□□ -1.52
SUB1-202ENST00000502453 VGFO15240 615 aaPredicted RBP5.54□□□□□ -1.52
SUB1-202ENST00000502453 DCAF8Q5TAQ9 597 aa5.54□□□□□ -1.52
SUB1-202ENST00000502453 ZFP91Q96JP5 570 aaPredicted RBP5.54□□□□□ -1.52
SUB1-202ENST00000502453 TRIM66O15016 1216 aa5.54□□□□□ -1.52
SUB1-202ENST00000502453 E2F4Q16254 413 aa5.54□□□□□ -1.52
SUB1-202ENST00000502453 NUBP1P53384 320 aa5.54□□□□□ -1.52
SUB1-202ENST00000502453 SMYD5Q6GMV2 418 aa5.54□□□□□ -1.52
SUB1-202ENST00000502453 RBM26Q5T8P6 1007 aaKnown RBP5.54□□□□□ -1.52
SUB1-202ENST00000502453 A6NJR5 290 aa5.53□□□□□ -1.52
SUB1-202ENST00000502453 SERPINA10Q9UK55 444 aa5.53□□□□□ -1.52
SUB1-202ENST00000502453 CLEC11AQ9Y240 323 aa5.53□□□□□ -1.52
SUB1-202ENST00000502453 GSE1Q14687 1217 aa5.52□□□□□ -1.53
SUB1-202ENST00000502453 GPIHBP1Q8IV16 184 aa5.52□□□□□ -1.53
SUB1-202ENST00000502453 RASEFQ8IZ41 740 aa5.52□□□□□ -1.53
SUB1-202ENST00000502453 CREBZFQ9NS37 354 aa5.52□□□□□ -1.53
SUB1-202ENST00000502453 TAF7LQ5H9L4 462 aa5.51□□□□□ -1.53
SUB1-202ENST00000502453 ATP1B4Q9UN42 357 aaPredicted RBP5.51□□□□□ -1.53
SUB1-202ENST00000502453 PROSER2Q86WR7 435 aaPredicted RBP5.51□□□□□ -1.53
SUB1-202ENST00000502453 PLEKHG3A1L390 1219 aa5.51□□□□□ -1.53
SUB1-202ENST00000502453 POM121Q96HA1 1249 aa5.5□□□□□ -1.53
SUB1-202ENST00000502453 ONECUT3O60422 494 aaPredicted RBP5.49□□□□□ -1.53
SUB1-202ENST00000502453 DDRGK1Q96HY6 314 aa5.48□□□□□ -1.53
SUB1-202ENST00000502453 ZNF526Q8TF50 670 aaPredicted RBP5.48□□□□□ -1.53
SUB1-202ENST00000502453 CCDC27Q2M243 656 aa5.48□□□□□ -1.53
SUB1-202ENST00000502453 REM2Q8IYK8 340 aaPredicted RBP5.48□□□□□ -1.53
SUB1-202ENST00000502453 CHADLQ6NUI6 762 aa5.47□□□□□ -1.53
SUB1-202ENST00000502453 PYGBP11216 843 aa5.47□□□□□ -1.53
SUB1-202ENST00000502453 MCM6Q14566 821 aa5.47□□□□□ -1.53
SUB1-202ENST00000502453 PITPNM1O00562 1244 aa5.45□□□□□ -1.54
SUB1-202ENST00000502453 SMARCA5O60264 1052 aaPredicted RBP5.45□□□□□ -1.54
SUB1-202ENST00000502453 ZNF592Q92610 1267 aa5.45□□□□□ -1.54
SUB1-202ENST00000502453 ACIN1Q9UKV3 1341 aaKnown RBP5.45□□□□□ -1.54
SUB1-202ENST00000502453 CERS3Q8IU89 383 aa5.45□□□□□ -1.54
SUB1-202ENST00000502453 PPP1R1BQ9UD71 204 aaPredicted RBP5.45□□□□□ -1.54
SUB1-202ENST00000502453 CARNS1A5YM72 827 aa5.44□□□□□ -1.54
SUB1-202ENST00000502453 MLLT3P42568 568 aaPredicted RBP5.44□□□□□ -1.54
SUB1-202ENST00000502453 IRX6P78412 446 aaPredicted RBP5.43□□□□□ -1.54
SUB1-202ENST00000502453 PSMD1Q99460 953 aa5.43□□□□□ -1.54
SUB1-202ENST00000502453 PRR29P0C7W0 189 aa5.43□□□□□ -1.54
SUB1-202ENST00000502453 UNCXA6NJT0 531 aa5.43□□□□□ -1.54
SUB1-202ENST00000502453 PKNOX2Q96KN3 472 aa5.43□□□□□ -1.54
SUB1-202ENST00000502453 BRPF3Q9ULD4 1205 aa5.43□□□□□ -1.54
SUB1-202ENST00000502453 KDM4AO75164 1064 aa5.43□□□□□ -1.54
SUB1-202ENST00000502453 CCDC125Q86Z20 511 aa5.43□□□□□ -1.54
SUB1-202ENST00000502453 PCMTD1Q96MG8 357 aaPredicted RBP5.43□□□□□ -1.54
SUB1-202ENST00000502453 NEFLP07196 543 aa5.42□□□□□ -1.54
SUB1-202ENST00000502453 PLSCR2Q9NRY7 297 aa5.42□□□□□ -1.54
SUB1-202ENST00000502453 ZNF330Q9Y3S2 320 aaPredicted RBP5.42□□□□□ -1.54
SUB1-202ENST00000502453 TTLL12Q14166 644 aaPredicted RBP5.41□□□□□ -1.54
SUB1-202ENST00000502453 FGD1P98174 961 aa5.41□□□□□ -1.54
SUB1-202ENST00000502453 IVNS1ABPQ9Y6Y0 642 aa5.41□□□□□ -1.54
SUB1-202ENST00000502453 AMOTL2Q9Y2J4 779 aa5.41□□□□□ -1.54
SUB1-202ENST00000502453 PARP9Q8IXQ6 854 aa5.4□□□□□ -1.54
SUB1-202ENST00000502453 SPDYE1Q8NFV5 336 aaPredicted RBP5.4□□□□□ -1.54
SUB1-202ENST00000502453 AKT1S1Q96B36 256 aa5.4□□□□□ -1.54
SUB1-202ENST00000502453 FNBP4Q8N3X1 1017 aaPredicted RBP5.4□□□□□ -1.55
SUB1-202ENST00000502453 RFX1P22670 979 aa5.4□□□□□ -1.55
SUB1-202ENST00000502453 FAM212AQ96EL1 285 aa5.39□□□□□ -1.55
SUB1-202ENST00000502453 LARP6Q9BRS8 491 aaKnown RBP5.39□□□□□ -1.55
SUB1-202ENST00000502453 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.39□□□□□ -1.55
SUB1-202ENST00000502453 CALR3Q96L12 384 aaKnown RBP5.38□□□□□ -1.55
SUB1-202ENST00000502453 TSPYL2Q9H2G4 693 aaPredicted RBP5.38□□□□□ -1.55
SUB1-202ENST00000502453 PATL2C9JE40 543 aaKnown RBP5.37□□□□□ -1.55
SUB1-202ENST00000502453 ARIH1Q9Y4X5 557 aaPredicted RBP5.37□□□□□ -1.55
SUB1-202ENST00000502453 CCDC102AQ96A19 550 aa5.37□□□□□ -1.55
SUB1-202ENST00000502453 PCDHB8Q9UN66 801 aa5.37□□□□□ -1.55
SUB1-202ENST00000502453 PCDHB13Q9Y5F0 798 aa5.37□□□□□ -1.55
SUB1-202ENST00000502453 A0A0U1RQG5 324 aaPredicted RBP5.37□□□□□ -1.55
SUB1-202ENST00000502453 PPP1R37O75864 691 aa5.37□□□□□ -1.55
SUB1-202ENST00000502453 BRD1O95696 1058 aa5.37□□□□□ -1.55
SUB1-202ENST00000502453 KCNA1Q09470 495 aa5.37□□□□□ -1.55
SUB1-202ENST00000502453 PPP1R15AO75807 674 aaPredicted RBP5.36□□□□□ -1.55
SUB1-202ENST00000502453 TMED8Q6PL24 325 aaPredicted RBP5.36□□□□□ -1.55
SUB1-202ENST00000502453 NOL8Q76FK4 1167 aaKnown RBP5.36□□□□□ -1.55
SUB1-202ENST00000502453 BCCIPQ9P287 314 aaKnown RBP eCLIP5.35□□□□□ -1.55
SUB1-202ENST00000502453 SND1Q7KZF4 910 aaKnown RBP eCLIP5.35□□□□□ -1.55
SUB1-202ENST00000502453 MRRFQ96E11 262 aaKnown RBP5.35□□□□□ -1.55
SUB1-202ENST00000502453 SGIP1Q9BQI5 828 aa5.34□□□□□ -1.55
SUB1-202ENST00000502453 COG6Q9Y2V7 657 aa5.34□□□□□ -1.55
SUB1-202ENST00000502453 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.34□□□□□ -1.55
SUB1-202ENST00000502453 CSB-PGBD3P0DP91 1061 aa5.34□□□□□ -1.55
SUB1-202ENST00000502453 TICAM2Q86XR7 235 aa5.34□□□□□ -1.55
SUB1-202ENST00000502453 CLSTN1O94985 981 aa5.34□□□□□ -1.56
SUB1-202ENST00000502453 ANKRD13AQ8IZ07 590 aa5.33□□□□□ -1.56
SUB1-202ENST00000502453 ANKRD62A6NC57 917 aa5.33□□□□□ -1.56
SUB1-202ENST00000502453 SPATA32Q96LK8 384 aa5.33□□□□□ -1.56
SUB1-202ENST00000502453 MFRPQ9BY79 579 aa5.33□□□□□ -1.56
SUB1-202ENST00000502453 RBM42Q9BTD8 480 aaKnown RBP5.32□□□□□ -1.56
SUB1-202ENST00000502453 GOPCQ9HD26 462 aa5.32□□□□□ -1.56
SUB1-202ENST00000502453 KIAA1522Q9P206 1035 aaPredicted RBP5.32□□□□□ -1.56
SUB1-202ENST00000502453 NUTM2FA1L443 756 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms