RNA–Protein interactions for RNA: ENST00000499038.2

UBE2B-202, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-202ENST00000499038 NKX1-1Q15270 411 aaPredicted RBP12.35□□□□□ -0.43
UBE2B-202ENST00000499038 ZNF710Q8N1W2 664 aa12.35□□□□□ -0.43
UBE2B-202ENST00000499038 HOXB3P14651 431 aaPredicted RBP12.33□□□□□ -0.44
UBE2B-202ENST00000499038 RIMBP2O15034 1052 aa12.32□□□□□ -0.44
UBE2B-202ENST00000499038 MARVELD3Q96A59 401 aa12.32□□□□□ -0.44
UBE2B-202ENST00000499038 RTN4Q9NQC3 1192 aaKnown RBP12.32□□□□□ -0.44
UBE2B-202ENST00000499038 TMC2Q8TDI7 906 aa12.31□□□□□ -0.44
UBE2B-202ENST00000499038 EMP3P54852 163 aa12.29□□□□□ -0.44
UBE2B-202ENST00000499038 C2orf72A6NCS6 295 aa12.28□□□□□ -0.44
UBE2B-202ENST00000499038 CDAN1Q8IWY9 1227 aa12.28□□□□□ -0.44
UBE2B-202ENST00000499038 KIF3CO14782 793 aa12.24□□□□□ -0.45
UBE2B-202ENST00000499038 HOXB1P14653 301 aaPredicted RBP12.22□□□□□ -0.45
UBE2B-202ENST00000499038 ZSWIM6Q9HCJ5 1215 aa12.22□□□□□ -0.45
UBE2B-202ENST00000499038 GTPBP6O43824 516 aaPredicted RBP12.21□□□□□ -0.45
UBE2B-202ENST00000499038 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
UBE2B-202ENST00000499038 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
UBE2B-202ENST00000499038 ERBB3P21860 1342 aa12.15□□□□□ -0.46
UBE2B-202ENST00000499038 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
UBE2B-202ENST00000499038 ARSIQ5FYB1 569 aa12.14□□□□□ -0.47
UBE2B-202ENST00000499038 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
UBE2B-202ENST00000499038 BBXQ8WY36 941 aaPredicted RBP12.14□□□□□ -0.47
UBE2B-202ENST00000499038 FOXK1P85037 733 aa12.11□□□□□ -0.47
UBE2B-202ENST00000499038 PLPP6Q8IY26 295 aa12.1□□□□□ -0.47
UBE2B-202ENST00000499038 DSG2Q14126 1118 aa12.09□□□□□ -0.47
UBE2B-202ENST00000499038 KHSRPQ92945 711 aaKnown RBP eCLIP12.09□□□□□ -0.475e-7■■□□□ 13.2
UBE2B-202ENST00000499038 POTEB3A0JP26 581 aa12.08□□□□□ -0.48
UBE2B-202ENST00000499038 SLC34A2O95436 690 aa12.08□□□□□ -0.48
UBE2B-202ENST00000499038 VARS2Q5ST30 1063 aaKnown RBP12.08□□□□□ -0.48
UBE2B-202ENST00000499038 POTEBQ6S5H4 581 aa12.08□□□□□ -0.48
UBE2B-202ENST00000499038 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.08□□□□□ -0.48
UBE2B-202ENST00000499038 PCDHGA4Q9Y5G9 962 aa12.07□□□□□ -0.48
UBE2B-202ENST00000499038 PDE4AP27815 886 aa12.06□□□□□ -0.48
UBE2B-202ENST00000499038 MMRN1Q13201 1228 aa12.06□□□□□ -0.48
UBE2B-202ENST00000499038 CRISPLD2Q9H0B8 497 aa12.06□□□□□ -0.48
UBE2B-202ENST00000499038 NUDT7P0C024 238 aa12.04□□□□□ -0.48
UBE2B-202ENST00000499038 NCKAP5LQ9HCH0 1330 aa12.03□□□□□ -0.48
UBE2B-202ENST00000499038 PPP1R15BQ5SWA1 713 aa12.02□□□□□ -0.49
UBE2B-202ENST00000499038 SPNS2Q8IVW8 549 aa12.02□□□□□ -0.49
UBE2B-202ENST00000499038 SPRYD3Q8NCJ5 442 aa12.02□□□□□ -0.49
UBE2B-202ENST00000499038 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
UBE2B-202ENST00000499038 PTCD2Q8WV60 388 aaKnown RBP12□□□□□ -0.49
UBE2B-202ENST00000499038 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
UBE2B-202ENST00000499038 TBC1D12O60347 775 aa11.99□□□□□ -0.49
UBE2B-202ENST00000499038 DDX27Q96GQ7 796 aaKnown RBP11.98□□□□□ -0.49
UBE2B-202ENST00000499038 KRTAP3-3Q9BYR6 98 aa11.97□□□□□ -0.49
UBE2B-202ENST00000499038 KRTAP3-2Q9BYR7 98 aa11.97□□□□□ -0.49
UBE2B-202ENST00000499038 CADPS2Q86UW7 1296 aa11.96□□□□□ -0.49
UBE2B-202ENST00000499038 ZNF687Q8N1G0 1237 aa11.96□□□□□ -0.49
UBE2B-202ENST00000499038 UPF1Q92900 1129 aaKnown RBP eCLIP11.96□□□□□ -0.49
UBE2B-202ENST00000499038 CFAP44Q96MT7 982 aa11.96□□□□□ -0.49
UBE2B-202ENST00000499038 LHX6Q9UPM6 363 aa11.96□□□□□ -0.49
UBE2B-202ENST00000499038 PAXIP1Q6ZW49 1069 aaPredicted RBP11.95□□□□□ -0.5
UBE2B-202ENST00000499038 MFSD10Q14728 455 aa11.92□□□□□ -0.5
UBE2B-202ENST00000499038 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
UBE2B-202ENST00000499038 PSDA5PKW4 1024 aaPredicted RBP11.89□□□□□ -0.51
UBE2B-202ENST00000499038 KDM4FA0A1W2PPD8 638 aa11.87□□□□□ -0.51
UBE2B-202ENST00000499038 PBX2P40425 430 aa11.84□□□□□ -0.51
UBE2B-202ENST00000499038 MAP3K9P80192 1104 aa11.83□□□□□ -0.52
UBE2B-202ENST00000499038 PPP4R3BQ5MIZ7 849 aa11.82□□□□□ -0.52
UBE2B-202ENST00000499038 EVI5O60447 810 aa11.8□□□□□ -0.52
UBE2B-202ENST00000499038 ANKRD13DQ6ZTN6 518 aa11.8□□□□□ -0.52
UBE2B-202ENST00000499038 EMILIN3Q9NT22 766 aa11.8□□□□□ -0.52
UBE2B-202ENST00000499038 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
UBE2B-202ENST00000499038 LSM11P83369 360 aaKnown RBP eCLIP11.78□□□□□ -0.52
UBE2B-202ENST00000499038 ZNF454Q8N9F8 522 aa11.77□□□□□ -0.53
UBE2B-202ENST00000499038 KCNH8Q96L42 1107 aa11.76□□□□□ -0.53
UBE2B-202ENST00000499038 ARHGAP33O14559 1287 aa11.75□□□□□ -0.53
UBE2B-202ENST00000499038 CAMK2BQ13554 666 aa11.75□□□□□ -0.53
UBE2B-202ENST00000499038 POTEEQ6S8J3 1075 aa11.75□□□□□ -0.53
UBE2B-202ENST00000499038 WDR70Q9NW82 654 aa11.75□□□□□ -0.53
UBE2B-202ENST00000499038 ANO8Q9HCE9 1232 aaPredicted RBP11.72□□□□□ -0.53
UBE2B-202ENST00000499038 DPYSL4O14531 572 aa11.71□□□□□ -0.53
UBE2B-202ENST00000499038 PTGER2P43116 358 aa11.71□□□□□ -0.53
UBE2B-202ENST00000499038 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
UBE2B-202ENST00000499038 KCNK17Q96T54 332 aa11.71□□□□□ -0.53
UBE2B-202ENST00000499038 PSEN2P49810 448 aa11.7□□□□□ -0.54
UBE2B-202ENST00000499038 FOSBP53539 338 aa11.7□□□□□ -0.54
UBE2B-202ENST00000499038 MYT1LQ9UL68 1186 aa11.7□□□□□ -0.54
UBE2B-202ENST00000499038 E2F4Q16254 413 aa11.67□□□□□ -0.54
UBE2B-202ENST00000499038 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
UBE2B-202ENST00000499038 DMRTA1Q5VZB9 504 aa11.66□□□□□ -0.54
UBE2B-202ENST00000499038 ZDHHC16Q969W1 377 aa11.66□□□□□ -0.54
UBE2B-202ENST00000499038 BCL2L12Q9HB09 334 aa11.66□□□□□ -0.54
UBE2B-202ENST00000499038 ADGRD1Q6QNK2 874 aa11.65□□□□□ -0.54
UBE2B-202ENST00000499038 TSHZ2Q9NRE2 1034 aa11.65□□□□□ -0.54
UBE2B-202ENST00000499038 PTPREP23469 700 aa11.64□□□□□ -0.55
UBE2B-202ENST00000499038 TK2O00142 265 aa11.62□□□□□ -0.55
UBE2B-202ENST00000499038 ADAM33Q9BZ11 813 aa11.62□□□□□ -0.55
UBE2B-202ENST00000499038 PCDHGA10Q9Y5H3 936 aa11.61□□□□□ -0.55
UBE2B-202ENST00000499038 PHF14O94880 888 aa11.6□□□□□ -0.55
UBE2B-202ENST00000499038 TYW1BQ6NUM6 668 aa11.6□□□□□ -0.55
UBE2B-202ENST00000499038 FBXW7Q969H0 707 aa11.59□□□□□ -0.55
UBE2B-202ENST00000499038 STAC3Q96MF2 364 aa11.59□□□□□ -0.55
UBE2B-202ENST00000499038 SPDYE16A6NNV3 312 aaPredicted RBP11.58□□□□□ -0.56
UBE2B-202ENST00000499038 PDIA6Q15084 440 aa11.58□□□□□ -0.56
UBE2B-202ENST00000499038 DDX12PQ92771 950 aa11.58□□□□□ -0.56
UBE2B-202ENST00000499038 EPAS1Q99814 870 aa11.57□□□□□ -0.56
UBE2B-202ENST00000499038 PLCB2Q00722 1185 aa11.56□□□□□ -0.56
UBE2B-202ENST00000499038 VPS9D1Q9Y2B5 631 aa11.55□□□□□ -0.56
UBE2B-202ENST00000499038 HRO43593 1189 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms