RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 TMEM92Q6UXU6 159 aa8.41□□□□□ -1.06
TRBVA-201ENST00000498804 DOK7Q18PE1 504 aa8.4□□□□□ -1.06
TRBVA-201ENST00000498804 GTPBP6O43824 516 aaPredicted RBP8.39□□□□□ -1.07
TRBVA-201ENST00000498804 RIMBP2O15034 1052 aa8.38□□□□□ -1.07
TRBVA-201ENST00000498804 ZNF710Q8N1W2 664 aa8.36□□□□□ -1.07
TRBVA-201ENST00000498804 TMC2Q8TDI7 906 aa8.35□□□□□ -1.07
TRBVA-201ENST00000498804 ZSWIM6Q9HCJ5 1215 aa8.35□□□□□ -1.07
TRBVA-201ENST00000498804 HOXB3P14651 431 aaPredicted RBP8.33□□□□□ -1.08
TRBVA-201ENST00000498804 KIF3CO14782 793 aa8.32□□□□□ -1.08
TRBVA-201ENST00000498804 C2orf72A6NCS6 295 aa8.31□□□□□ -1.08
TRBVA-201ENST00000498804 BBXQ8WY36 941 aaPredicted RBP8.31□□□□□ -1.08
TRBVA-201ENST00000498804 HOXB1P14653 301 aaPredicted RBP8.3□□□□□ -1.08
TRBVA-201ENST00000498804 EMP3P54852 163 aa8.3□□□□□ -1.08
TRBVA-201ENST00000498804 CADPS2Q86UW7 1296 aa8.28□□□□□ -1.08
TRBVA-201ENST00000498804 MARVELD3Q96A59 401 aa8.27□□□□□ -1.09
TRBVA-201ENST00000498804 GPHNQ9NQX3 736 aaPredicted RBP8.27□□□□□ -1.09
TRBVA-201ENST00000498804 SLC34A2O95436 690 aa8.25□□□□□ -1.09
TRBVA-201ENST00000498804 FOXK1P85037 733 aa8.25□□□□□ -1.09
TRBVA-201ENST00000498804 CDAN1Q8IWY9 1227 aa8.25□□□□□ -1.09
TRBVA-201ENST00000498804 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.24□□□□□ -1.09
TRBVA-201ENST00000498804 NCKAP5LQ9HCH0 1330 aa8.24□□□□□ -1.09
TRBVA-201ENST00000498804 GPR153Q6NV75 609 aa8.23□□□□□ -1.09
TRBVA-201ENST00000498804 PAXIP1Q6ZW49 1069 aaPredicted RBP8.23□□□□□ -1.09
TRBVA-201ENST00000498804 PDE4AP27815 886 aa8.22□□□□□ -1.09
TRBVA-201ENST00000498804 ERBB3P21860 1342 aa8.22□□□□□ -1.09
TRBVA-201ENST00000498804 FAM205CA6NFA0 338 aa8.21□□□□□ -1.1
TRBVA-201ENST00000498804 CFAP44Q96MT7 982 aa8.21□□□□□ -1.1
TRBVA-201ENST00000498804 HS3ST6Q96QI5 342 aa8.21□□□□□ -1.1
TRBVA-201ENST00000498804 CRISPLD2Q9H0B8 497 aa8.2□□□□□ -1.1
TRBVA-201ENST00000498804 ARSIQ5FYB1 569 aa8.19□□□□□ -1.1
TRBVA-201ENST00000498804 PLPP6Q8IY26 295 aa8.19□□□□□ -1.1
TRBVA-201ENST00000498804 TBC1D12O60347 775 aa8.18□□□□□ -1.1
TRBVA-201ENST00000498804 DSG2Q14126 1118 aa8.18□□□□□ -1.1
TRBVA-201ENST00000498804 SPRYD3Q8NCJ5 442 aa8.18□□□□□ -1.1
TRBVA-201ENST00000498804 PCDHGA4Q9Y5G9 962 aa8.18□□□□□ -1.1
TRBVA-201ENST00000498804 PTCD2Q8WV60 388 aaKnown RBP8.17□□□□□ -1.1
TRBVA-201ENST00000498804 PPP1R15BQ5SWA1 713 aa8.16□□□□□ -1.1
TRBVA-201ENST00000498804 VARS2Q5ST30 1063 aaKnown RBP8.15□□□□□ -1.1
TRBVA-201ENST00000498804 PSDA5PKW4 1024 aaPredicted RBP8.14□□□□□ -1.11
TRBVA-201ENST00000498804 ZNF316A6NFI3 1004 aaPredicted RBP8.14□□□□□ -1.11
TRBVA-201ENST00000498804 KHSRPQ92945 711 aaKnown RBP eCLIP8.14□□□□□ -1.11
TRBVA-201ENST00000498804 DDX27Q96GQ7 796 aaKnown RBP8.14□□□□□ -1.11
TRBVA-201ENST00000498804 LARP6Q9BRS8 491 aaKnown RBP8.13□□□□□ -1.11
TRBVA-201ENST00000498804 TSHZ2Q9NRE2 1034 aa8.13□□□□□ -1.11
TRBVA-201ENST00000498804 POTEB3A0JP26 581 aa8.12□□□□□ -1.11
TRBVA-201ENST00000498804 NUDT7P0C024 238 aa8.12□□□□□ -1.11
TRBVA-201ENST00000498804 MFSD10Q14728 455 aa8.12□□□□□ -1.11
TRBVA-201ENST00000498804 POTEBQ6S5H4 581 aa8.12□□□□□ -1.11
TRBVA-201ENST00000498804 ZNF687Q8N1G0 1237 aa8.12□□□□□ -1.11
TRBVA-201ENST00000498804 PLCB2Q00722 1185 aa8.09□□□□□ -1.11
TRBVA-201ENST00000498804 OXER1Q8TDS5 423 aa8.09□□□□□ -1.11
TRBVA-201ENST00000498804 LHX6Q9UPM6 363 aa8.09□□□□□ -1.11
TRBVA-201ENST00000498804 KDM4FA0A1W2PPD8 638 aa8.07□□□□□ -1.12
TRBVA-201ENST00000498804 PBX2P40425 430 aa8.07□□□□□ -1.12
TRBVA-201ENST00000498804 KRTAP3-3Q9BYR6 98 aa8.07□□□□□ -1.12
TRBVA-201ENST00000498804 KRTAP3-2Q9BYR7 98 aa8.07□□□□□ -1.12
TRBVA-201ENST00000498804 EMILIN3Q9NT22 766 aa8.06□□□□□ -1.12
TRBVA-201ENST00000498804 UPF1Q92900 1129 aaKnown RBP eCLIP8.05□□□□□ -1.12
TRBVA-201ENST00000498804 PPP4R3BQ5MIZ7 849 aa8.03□□□□□ -1.12
TRBVA-201ENST00000498804 SPNS2Q8IVW8 549 aa8.03□□□□□ -1.12
TRBVA-201ENST00000498804 MAP3K9P80192 1104 aa8.02□□□□□ -1.13
TRBVA-201ENST00000498804 PTGER2P43116 358 aa8.01□□□□□ -1.13
TRBVA-201ENST00000498804 MMRN1Q13201 1228 aa8.01□□□□□ -1.13
TRBVA-201ENST00000498804 CAMK2BQ13554 666 aa8.01□□□□□ -1.13
TRBVA-201ENST00000498804 KCNH8Q96L42 1107 aa8□□□□□ -1.13
TRBVA-201ENST00000498804 WDR70Q9NW82 654 aa8□□□□□ -1.13
TRBVA-201ENST00000498804 ARHGAP33O14559 1287 aa7.99□□□□□ -1.13
TRBVA-201ENST00000498804 EVI5O60447 810 aa7.99□□□□□ -1.13
TRBVA-201ENST00000498804 ANO8Q9HCE9 1232 aaPredicted RBP7.99□□□□□ -1.13
TRBVA-201ENST00000498804 LSM11P83369 360 aaKnown RBP eCLIP7.98□□□□□ -1.13
TRBVA-201ENST00000498804 ZNF454Q8N9F8 522 aa7.96□□□□□ -1.14
TRBVA-201ENST00000498804 JPH4Q96JJ6 628 aa7.96□□□□□ -1.14
TRBVA-201ENST00000498804 DPYSL4O14531 572 aa7.95□□□□□ -1.14
TRBVA-201ENST00000498804 POTEEQ6S8J3 1075 aa7.95□□□□□ -1.14
TRBVA-201ENST00000498804 ANKRD13DQ6ZTN6 518 aa7.95□□□□□ -1.14
TRBVA-201ENST00000498804 KDM2AQ9Y2K7 1162 aa7.95□□□□□ -1.14
TRBVA-201ENST00000498804 FOSBP53539 338 aa7.94□□□□□ -1.14
TRBVA-201ENST00000498804 HAP1P54257 671 aaPredicted RBP7.94□□□□□ -1.14
TRBVA-201ENST00000498804 E2F4Q16254 413 aa7.94□□□□□ -1.14
TRBVA-201ENST00000498804 TK2O00142 265 aa7.92□□□□□ -1.14
TRBVA-201ENST00000498804 ZDHHC16Q969W1 377 aa7.92□□□□□ -1.14
TRBVA-201ENST00000498804 BCL2L12Q9HB09 334 aa7.92□□□□□ -1.14
TRBVA-201ENST00000498804 AXIN2Q9Y2T1 843 aa7.92□□□□□ -1.14
TRBVA-201ENST00000498804 SPDYE16A6NNV3 312 aaPredicted RBP7.91□□□□□ -1.14
TRBVA-201ENST00000498804 KCNV2Q8TDN2 545 aa7.91□□□□□ -1.14
TRBVA-201ENST00000498804 MYT1LQ9UL68 1186 aa7.91□□□□□ -1.14
TRBVA-201ENST00000498804 ARIH1Q9Y4X5 557 aaPredicted RBP7.91□□□□□ -1.14
TRBVA-201ENST00000498804 PHF14O94880 888 aa7.9□□□□□ -1.14
TRBVA-201ENST00000498804 PTPREP23469 700 aa7.9□□□□□ -1.14
TRBVA-201ENST00000498804 FBXW7Q969H0 707 aa7.9□□□□□ -1.14
TRBVA-201ENST00000498804 ADGRD1Q6QNK2 874 aa7.89□□□□□ -1.15
TRBVA-201ENST00000498804 RNF166Q96A37 237 aaPredicted RBP7.89□□□□□ -1.15
TRBVA-201ENST00000498804 KCNK17Q96T54 332 aa7.89□□□□□ -1.15
TRBVA-201ENST00000498804 EPAS1Q99814 870 aa7.89□□□□□ -1.15
TRBVA-201ENST00000498804 PSEN2P49810 448 aa7.88□□□□□ -1.15
TRBVA-201ENST00000498804 PDIA6Q15084 440 aa7.88□□□□□ -1.15
TRBVA-201ENST00000498804 TYW1BQ6NUM6 668 aa7.88□□□□□ -1.15
TRBVA-201ENST00000498804 SLC4A5Q9BY07 1137 aa7.87□□□□□ -1.15
TRBVA-201ENST00000498804 PCDHGA10Q9Y5H3 936 aa7.87□□□□□ -1.15
TRBVA-201ENST00000498804 DMRTA1Q5VZB9 504 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms