RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
NEB-216ENST00000497809 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
NEB-216ENST00000497809 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
NEB-216ENST00000497809 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
NEB-216ENST00000497809 RSPH4AQ5TD94 716 aa10.91□□□□□ -0.66
NEB-216ENST00000497809 PDE4DQ08499 809 aa10.9□□□□□ -0.66
NEB-216ENST00000497809 PLEKHG3A1L390 1219 aa10.88□□□□□ -0.67
NEB-216ENST00000497809 TRIM66O15016 1216 aa10.87□□□□□ -0.67
NEB-216ENST00000497809 RYDENQ9NUL5 291 aaKnown RBP10.86□□□□□ -0.67
NEB-216ENST00000497809 BCL11BQ9C0K0 894 aaPredicted RBP10.85□□□□□ -0.67
NEB-216ENST00000497809 STK24Q9Y6E0 443 aa10.85□□□□□ -0.67
NEB-216ENST00000497809 KRI1Q8N9T8 703 aaKnown RBP10.82□□□□□ -0.68
NEB-216ENST00000497809 CCDC97Q96F63 343 aaPredicted RBP10.82□□□□□ -0.68
NEB-216ENST00000497809 CWC22Q9HCG8 908 aaKnown RBP10.82□□□□□ -0.68
NEB-216ENST00000497809 SERPINA10Q9UK55 444 aa10.82□□□□□ -0.68
NEB-216ENST00000497809 PPM1GO15355 546 aaPredicted RBP10.81□□□□□ -0.68
NEB-216ENST00000497809 VGFO15240 615 aaPredicted RBP10.81□□□□□ -0.68
NEB-216ENST00000497809 SPDYE1Q8NFV5 336 aaPredicted RBP10.79□□□□□ -0.68
NEB-216ENST00000497809 PDE4CQ08493 712 aa10.78□□□□□ -0.68
NEB-216ENST00000497809 E2F4Q16254 413 aa10.77□□□□□ -0.68
NEB-216ENST00000497809 CCDC125Q86Z20 511 aa10.77□□□□□ -0.68
NEB-216ENST00000497809 PLSCR2Q9NRY7 297 aa10.77□□□□□ -0.68
NEB-216ENST00000497809 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.77□□□□□ -0.69
NEB-216ENST00000497809 PROSER2Q86WR7 435 aaPredicted RBP10.77□□□□□ -0.69
NEB-216ENST00000497809 ZFP91Q96JP5 570 aaPredicted RBP10.77□□□□□ -0.69
NEB-216ENST00000497809 FNBP4Q8N3X1 1017 aaPredicted RBP10.76□□□□□ -0.69
NEB-216ENST00000497809 MCM6Q14566 821 aa10.76□□□□□ -0.69
NEB-216ENST00000497809 UNCXA6NJT0 531 aa10.75□□□□□ -0.69
NEB-216ENST00000497809 AMOTL2Q9Y2J4 779 aa10.75□□□□□ -0.69
NEB-216ENST00000497809 TAF7LQ5H9L4 462 aa10.74□□□□□ -0.69
NEB-216ENST00000497809 RBM26Q5T8P6 1007 aaKnown RBP10.74□□□□□ -0.69
NEB-216ENST00000497809 POM121Q96HA1 1249 aa10.74□□□□□ -0.69
NEB-216ENST00000497809 PRKAR2AP13861 404 aaKnown RBP10.74□□□□□ -0.69
NEB-216ENST00000497809 EVX2Q03828 476 aa10.73□□□□□ -0.69
NEB-216ENST00000497809 GSE1Q14687 1217 aa10.73□□□□□ -0.69
NEB-216ENST00000497809 ZBTB47Q9UFB7 747 aaPredicted RBP10.72□□□□□ -0.69
NEB-216ENST00000497809 CLEC11AQ9Y240 323 aa10.72□□□□□ -0.69
NEB-216ENST00000497809 ARIH1Q9Y4X5 557 aaPredicted RBP10.72□□□□□ -0.69
NEB-216ENST00000497809 SMYD5Q6GMV2 418 aa10.72□□□□□ -0.69
NEB-216ENST00000497809 IGSF5Q9NSI5 407 aa10.71□□□□□ -0.69
NEB-216ENST00000497809 GPIHBP1Q8IV16 184 aa10.7□□□□□ -0.7
NEB-216ENST00000497809 SSUH2Q9Y2M2 353 aa10.7□□□□□ -0.7
NEB-216ENST00000497809 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
NEB-216ENST00000497809 CERS3Q8IU89 383 aa10.68□□□□□ -0.7
NEB-216ENST00000497809 SGIP1Q9BQI5 828 aa10.67□□□□□ -0.7
NEB-216ENST00000497809 C19orf67A6NJJ6 358 aa10.66□□□□□ -0.7
NEB-216ENST00000497809 BRPF3Q9ULD4 1205 aa10.66□□□□□ -0.7
NEB-216ENST00000497809 ZNF592Q92610 1267 aa10.64□□□□□ -0.71
NEB-216ENST00000497809 CCDC27Q2M243 656 aa10.63□□□□□ -0.71
NEB-216ENST00000497809 NUBP1P53384 320 aa10.62□□□□□ -0.71
NEB-216ENST00000497809 MYT1LQ9UL68 1186 aa10.62□□□□□ -0.71
NEB-216ENST00000497809 SMARCA5O60264 1052 aaPredicted RBP10.6□□□□□ -0.71
NEB-216ENST00000497809 ARID4BQ4LE39 1312 aaPredicted RBP10.6□□□□□ -0.71
NEB-216ENST00000497809 MLLT3P42568 568 aaPredicted RBP10.59□□□□□ -0.71
NEB-216ENST00000497809 DCAF8Q5TAQ9 597 aa10.59□□□□□ -0.71
NEB-216ENST00000497809 KCNA1Q09470 495 aa10.59□□□□□ -0.71
NEB-216ENST00000497809 GOPCQ9HD26 462 aa10.59□□□□□ -0.71
NEB-216ENST00000497809 PARP9Q8IXQ6 854 aa10.57□□□□□ -0.72
NEB-216ENST00000497809 CADPSQ9ULU8 1353 aa10.57□□□□□ -0.72
NEB-216ENST00000497809 TMED8Q6PL24 325 aaPredicted RBP10.56□□□□□ -0.72
NEB-216ENST00000497809 PATL2C9JE40 543 aaKnown RBP10.56□□□□□ -0.72
NEB-216ENST00000497809 BCCIPQ9P287 314 aaKnown RBP eCLIP10.56□□□□□ -0.72
NEB-216ENST00000497809 KDM4AO75164 1064 aa10.55□□□□□ -0.72
NEB-216ENST00000497809 GABBR2O75899 941 aa10.55□□□□□ -0.72
NEB-216ENST00000497809 BRD1O95696 1058 aa10.55□□□□□ -0.72
NEB-216ENST00000497809 PRR29P0C7W0 189 aa10.54□□□□□ -0.72
NEB-216ENST00000497809 CARNS1A5YM72 827 aa10.54□□□□□ -0.72
NEB-216ENST00000497809 PPP1R15AO75807 674 aaPredicted RBP10.54□□□□□ -0.72
NEB-216ENST00000497809 IRX6P78412 446 aaPredicted RBP10.54□□□□□ -0.72
NEB-216ENST00000497809 PSMD1Q99460 953 aa10.54□□□□□ -0.72
NEB-216ENST00000497809 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.54□□□□□ -0.72
NEB-216ENST00000497809 TICAM2Q86XR7 235 aa10.52□□□□□ -0.72
NEB-216ENST00000497809 KIAA1522Q9P206 1035 aaPredicted RBP10.52□□□□□ -0.72
NEB-216ENST00000497809 IVNS1ABPQ9Y6Y0 642 aa10.52□□□□□ -0.72
NEB-216ENST00000497809 SND1Q7KZF4 910 aaKnown RBP eCLIP10.52□□□□□ -0.73
NEB-216ENST00000497809 PABPN1Q86U42 306 aaKnown RBP eCLIP10.52□□□□□ -0.73
NEB-216ENST00000497809 SPATA32Q96LK8 384 aa10.52□□□□□ -0.73
NEB-216ENST00000497809 CC2D2BQ6DHV5 1058 aa10.51□□□□□ -0.73
NEB-216ENST00000497809 CHADLQ6NUI6 762 aa10.51□□□□□ -0.73
NEB-216ENST00000497809 PCMTD1Q96MG8 357 aaPredicted RBP10.5□□□□□ -0.73
NEB-216ENST00000497809 GPR37O15354 613 aa10.49□□□□□ -0.73
NEB-216ENST00000497809 COG6Q9Y2V7 657 aa10.49□□□□□ -0.73
NEB-216ENST00000497809 PPP1R37O75864 691 aa10.48□□□□□ -0.73
NEB-216ENST00000497809 ACIN1Q9UKV3 1341 aaKnown RBP10.48□□□□□ -0.73
NEB-216ENST00000497809 CANXP27824 592 aaKnown RBP10.47□□□□□ -0.73
NEB-216ENST00000497809 RBM47A0AV96 593 aaKnown RBP10.46□□□□□ -0.73
NEB-216ENST00000497809 AMHR2Q16671 573 aa10.46□□□□□ -0.73
NEB-216ENST00000497809 CCDC102AQ96A19 550 aa10.46□□□□□ -0.73
NEB-216ENST00000497809 ZNF330Q9Y3S2 320 aaPredicted RBP10.46□□□□□ -0.73
NEB-216ENST00000497809 CHRM1P11229 460 aaPredicted RBP10.46□□□□□ -0.74
NEB-216ENST00000497809 LHX8Q68G74 356 aa10.46□□□□□ -0.74
NEB-216ENST00000497809 ZNF526Q8TF50 670 aaPredicted RBP10.45□□□□□ -0.74
NEB-216ENST00000497809 MFRPQ9BY79 579 aa10.45□□□□□ -0.74
NEB-216ENST00000497809 NCKAP5LQ9HCH0 1330 aa10.45□□□□□ -0.74
NEB-216ENST00000497809 PRDM16Q9HAZ2 1276 aa10.44□□□□□ -0.74
NEB-216ENST00000497809 MRRFQ96E11 262 aaKnown RBP10.43□□□□□ -0.74
NEB-216ENST00000497809 CLSTN1O94985 981 aa10.43□□□□□ -0.74
NEB-216ENST00000497809 CLCN6P51797 869 aa10.43□□□□□ -0.74
NEB-216ENST00000497809 ANKRD13AQ8IZ07 590 aa10.42□□□□□ -0.74
NEB-216ENST00000497809 SKIV2LQ15477 1246 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms