RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ZNF687Q8N1G0 1237 aa9.94□□□□□ -0.82
PSPC1-205ENST00000497722 RGL2O15211 777 aa9.93□□□□□ -0.82
PSPC1-205ENST00000497722 EFCAB3Q8N7B9 438 aa9.91□□□□□ -0.82
PSPC1-205ENST00000497722 TAOK2Q9UL54 1235 aa9.85□□□□□ -0.83
PSPC1-205ENST00000497722 SOX12O15370 315 aa9.84□□□□□ -0.83
PSPC1-205ENST00000497722 BCL11BQ9C0K0 894 aaPredicted RBP9.84□□□□□ -0.83
PSPC1-205ENST00000497722 GPR153Q6NV75 609 aa9.83□□□□□ -0.84
PSPC1-205ENST00000497722 ANKRD13DQ6ZTN6 518 aa9.83□□□□□ -0.84
PSPC1-205ENST00000497722 MS4A4AQ96JQ5 239 aa9.83□□□□□ -0.84
PSPC1-205ENST00000497722 MICALL2Q8IY33 904 aa9.8□□□□□ -0.84
PSPC1-205ENST00000497722 STK25O00506 426 aa9.79□□□□□ -0.84
PSPC1-205ENST00000497722 FBXO22Q8NEZ5 403 aa9.79□□□□□ -0.84
PSPC1-205ENST00000497722 PHF8Q9UPP1 1060 aa9.79□□□□□ -0.84
PSPC1-205ENST00000497722 STK24Q9Y6E0 443 aa9.79□□□□□ -0.84
PSPC1-205ENST00000497722 LSM11P83369 360 aaKnown RBP eCLIP9.78□□□□□ -0.84
PSPC1-205ENST00000497722 TMEM92Q6UXU6 159 aa9.77□□□□□ -0.85
PSPC1-205ENST00000497722 MFRPQ9BY79 579 aa9.77□□□□□ -0.85
PSPC1-205ENST00000497722 PLA2G2EQ9NZK7 142 aa9.76□□□□□ -0.85
PSPC1-205ENST00000497722 ZNF316A6NFI3 1004 aaPredicted RBP9.74□□□□□ -0.85
PSPC1-205ENST00000497722 NLRP6P59044 892 aa9.73□□□□□ -0.85
PSPC1-205ENST00000497722 ARSIQ5FYB1 569 aa9.73□□□□□ -0.85
PSPC1-205ENST00000497722 HS6ST3Q8IZP7 471 aa9.73□□□□□ -0.85
PSPC1-205ENST00000497722 PBX2P40425 430 aa9.72□□□□□ -0.85
PSPC1-205ENST00000497722 HCSTQ9UBK5 93 aa9.71□□□□□ -0.86
PSPC1-205ENST00000497722 DNAJC5Q9H3Z4 198 aa9.7□□□□□ -0.86
PSPC1-205ENST00000497722 CHGAP10645 457 aaKnown RBP9.64□□□□□ -0.87
PSPC1-205ENST00000497722 NKX1-1Q15270 411 aaPredicted RBP9.63□□□□□ -0.87
PSPC1-205ENST00000497722 KHSRPQ92945 711 aaKnown RBP eCLIP9.63□□□□□ -0.87
PSPC1-205ENST00000497722 PPP1R37O75864 691 aa9.61□□□□□ -0.87
PSPC1-205ENST00000497722 KIF3CO14782 793 aa9.57□□□□□ -0.88
PSPC1-205ENST00000497722 NUDT7P0C024 238 aa9.57□□□□□ -0.88
PSPC1-205ENST00000497722 ADGRD1Q6QNK2 874 aa9.56□□□□□ -0.88
PSPC1-205ENST00000497722 AXIN2Q9Y2T1 843 aa9.56□□□□□ -0.88
PSPC1-205ENST00000497722 POTEEQ6S8J3 1075 aa9.54□□□□□ -0.88
PSPC1-205ENST00000497722 LHX6Q9UPM6 363 aa9.53□□□□□ -0.88
PSPC1-205ENST00000497722 ARHGAP33O14559 1287 aa9.51□□□□□ -0.89
PSPC1-205ENST00000497722 AMER1Q5JTC6 1135 aaPredicted RBP9.51□□□□□ -0.89
PSPC1-205ENST00000497722 RTN4Q9NQC3 1192 aaKnown RBP9.51□□□□□ -0.89
PSPC1-205ENST00000497722 PSDA5PKW4 1024 aaPredicted RBP9.5□□□□□ -0.89
PSPC1-205ENST00000497722 C2orf72A6NCS6 295 aa9.5□□□□□ -0.89
PSPC1-205ENST00000497722 TK2O00142 265 aa9.49□□□□□ -0.89
PSPC1-205ENST00000497722 GTPBP6O43824 516 aaPredicted RBP9.49□□□□□ -0.89
PSPC1-205ENST00000497722 SLC34A2O95436 690 aa9.49□□□□□ -0.89
PSPC1-205ENST00000497722 PCDHGA4Q9Y5G9 962 aa9.49□□□□□ -0.89
PSPC1-205ENST00000497722 RGS20O76081 388 aa9.48□□□□□ -0.89
PSPC1-205ENST00000497722 RYDENQ9NUL5 291 aaKnown RBP9.45□□□□□ -0.9
PSPC1-205ENST00000497722 IRX2Q9BZI1 471 aaPredicted RBP9.44□□□□□ -0.9
PSPC1-205ENST00000497722 HRO43593 1189 aa9.43□□□□□ -0.9
PSPC1-205ENST00000497722 KCTD12Q96CX2 325 aaKnown RBP9.43□□□□□ -0.9
PSPC1-205ENST00000497722 DCAF8L2P0C7V8 631 aa9.42□□□□□ -0.9
PSPC1-205ENST00000497722 STAC3Q96MF2 364 aa9.42□□□□□ -0.9
PSPC1-205ENST00000497722 TMC2Q8TDI7 906 aa9.41□□□□□ -0.9
PSPC1-205ENST00000497722 GPHNQ9NQX3 736 aaPredicted RBP9.41□□□□□ -0.9
PSPC1-205ENST00000497722 FOXK1P85037 733 aa9.39□□□□□ -0.91
PSPC1-205ENST00000497722 IFFO2Q5TF58 517 aa9.39□□□□□ -0.91
PSPC1-205ENST00000497722 CRISPLD2Q9H0B8 497 aa9.38□□□□□ -0.91
PSPC1-205ENST00000497722 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
PSPC1-205ENST00000497722 PSEN2P49810 448 aa9.36□□□□□ -0.91
PSPC1-205ENST00000497722 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
PSPC1-205ENST00000497722 NCKAP5LQ9HCH0 1330 aa9.35□□□□□ -0.91
PSPC1-205ENST00000497722 DSG2Q14126 1118 aa9.35□□□□□ -0.91
PSPC1-205ENST00000497722 KCNH8Q96L42 1107 aa9.35□□□□□ -0.91
PSPC1-205ENST00000497722 PPP4R3BQ5MIZ7 849 aa9.34□□□□□ -0.91
PSPC1-205ENST00000497722 KDM4FA0A1W2PPD8 638 aa9.33□□□□□ -0.92
PSPC1-205ENST00000497722 PLPP6Q8IY26 295 aa9.33□□□□□ -0.92
PSPC1-205ENST00000497722 PTCD2Q8WV60 388 aaKnown RBP9.32□□□□□ -0.92
PSPC1-205ENST00000497722 A0A0G2JS52 829 aa9.31□□□□□ -0.92
PSPC1-205ENST00000497722 PTPN5P54829 565 aa9.31□□□□□ -0.92
PSPC1-205ENST00000497722 CADPS2Q86UW7 1296 aa9.3□□□□□ -0.92
PSPC1-205ENST00000497722 MFSD10Q14728 455 aa9.28□□□□□ -0.92
PSPC1-205ENST00000497722 PDE4AP27815 886 aa9.27□□□□□ -0.93
PSPC1-205ENST00000497722 KCNK17Q96T54 332 aa9.27□□□□□ -0.93
PSPC1-205ENST00000497722 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
PSPC1-205ENST00000497722 OXER1Q8TDS5 423 aa9.25□□□□□ -0.93
PSPC1-205ENST00000497722 VPS9D1Q9Y2B5 631 aa9.25□□□□□ -0.93
PSPC1-205ENST00000497722 THSD4Q6ZMP0 1018 aa9.24□□□□□ -0.93
PSPC1-205ENST00000497722 LARP6Q9BRS8 491 aaKnown RBP9.23□□□□□ -0.93
PSPC1-205ENST00000497722 SPRYD3Q8NCJ5 442 aa9.22□□□□□ -0.93
PSPC1-205ENST00000497722 TBC1D12O60347 775 aa9.21□□□□□ -0.94
PSPC1-205ENST00000497722 Q6ZNB5 142 aa9.2□□□□□ -0.94
PSPC1-205ENST00000497722 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
PSPC1-205ENST00000497722 SLC4A5Q9BY07 1137 aa9.2□□□□□ -0.94
PSPC1-205ENST00000497722 GOLGA8CPA6NN73 597 aa9.19□□□□□ -0.94
PSPC1-205ENST00000497722 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.19□□□□□ -0.94
PSPC1-205ENST00000497722 WNT2BQ93097 391 aa9.17□□□□□ -0.94
PSPC1-205ENST00000497722 EMILIN3Q9NT22 766 aa9.17□□□□□ -0.94
PSPC1-205ENST00000497722 CAMK2BQ13554 666 aa9.16□□□□□ -0.94
PSPC1-205ENST00000497722 PAXIP1Q6ZW49 1069 aaPredicted RBP9.15□□□□□ -0.94
PSPC1-205ENST00000497722 MRPL50Q8N5N7 158 aaKnown RBP9.15□□□□□ -0.94
PSPC1-205ENST00000497722 UPF1Q92900 1129 aaKnown RBP eCLIP9.15□□□□□ -0.94
PSPC1-205ENST00000497722 ANO8Q9HCE9 1232 aaPredicted RBP9.15□□□□□ -0.94
PSPC1-205ENST00000497722 BHMG1C9JSJ3 638 aaPredicted RBP9.14□□□□□ -0.95
PSPC1-205ENST00000497722 BCL2L12Q9HB09 334 aa9.14□□□□□ -0.95
PSPC1-205ENST00000497722 NBPF3Q9H094 633 aa9.13□□□□□ -0.95
PSPC1-205ENST00000497722 ZNF454Q8N9F8 522 aa9.12□□□□□ -0.95
PSPC1-205ENST00000497722 CFAP44Q96MT7 982 aa9.11□□□□□ -0.95
PSPC1-205ENST00000497722 ITGBL1O95965 494 aaPredicted RBP9.1□□□□□ -0.95
PSPC1-205ENST00000497722 PTPREP23469 700 aa9.1□□□□□ -0.95
PSPC1-205ENST00000497722 LAPTM4AQ15012 233 aa9.09□□□□□ -0.95
PSPC1-205ENST00000497722 EVI5O60447 810 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms