RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 HOXB3P14651 431 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-216ENST00000497122 FAM205CA6NFA0 338 aa12.09□□□□□ -0.47
SOX2-OT-216ENST00000497122 RIMBP2O15034 1052 aa12.09□□□□□ -0.47
SOX2-OT-216ENST00000497122 HS3ST6Q96QI5 342 aa12.05□□□□□ -0.48
SOX2-OT-216ENST00000497122 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
SOX2-OT-216ENST00000497122 HOXB1P14653 301 aaPredicted RBP12□□□□□ -0.49
SOX2-OT-216ENST00000497122 ERBB3P21860 1342 aa12□□□□□ -0.49
SOX2-OT-216ENST00000497122 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
SOX2-OT-216ENST00000497122 POTEB3A0JP26 581 aa11.97□□□□□ -0.49
SOX2-OT-216ENST00000497122 POTEBQ6S5H4 581 aa11.97□□□□□ -0.49
SOX2-OT-216ENST00000497122 C2orf72A6NCS6 295 aa11.95□□□□□ -0.5
SOX2-OT-216ENST00000497122 PPP1R37O75864 691 aa11.95□□□□□ -0.5
SOX2-OT-216ENST00000497122 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
SOX2-OT-216ENST00000497122 DCAF8L2P0C7V8 631 aa11.93□□□□□ -0.5
SOX2-OT-216ENST00000497122 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
SOX2-OT-216ENST00000497122 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
SOX2-OT-216ENST00000497122 ARSIQ5FYB1 569 aa11.92□□□□□ -0.5
SOX2-OT-216ENST00000497122 SPNS2Q8IVW8 549 aa11.9□□□□□ -0.5
SOX2-OT-216ENST00000497122 GPR153Q6NV75 609 aa11.89□□□□□ -0.51
SOX2-OT-216ENST00000497122 KHSRPQ92945 711 aaKnown RBP eCLIP11.88□□□□□ -0.51
SOX2-OT-216ENST00000497122 KRTAP3-3Q9BYR6 98 aa11.88□□□□□ -0.51
SOX2-OT-216ENST00000497122 KRTAP3-2Q9BYR7 98 aa11.88□□□□□ -0.51
SOX2-OT-216ENST00000497122 KIF3CO14782 793 aa11.87□□□□□ -0.51
SOX2-OT-216ENST00000497122 MMRN1Q13201 1228 aa11.85□□□□□ -0.51
SOX2-OT-216ENST00000497122 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-216ENST00000497122 NUDT7P0C024 238 aa11.8□□□□□ -0.52
SOX2-OT-216ENST00000497122 RYDENQ9NUL5 291 aaKnown RBP11.79□□□□□ -0.52
SOX2-OT-216ENST00000497122 ZNF316A6NFI3 1004 aaPredicted RBP11.78□□□□□ -0.52
SOX2-OT-216ENST00000497122 PCDHGA4Q9Y5G9 962 aa11.78□□□□□ -0.52
SOX2-OT-216ENST00000497122 ZNF687Q8N1G0 1237 aa11.76□□□□□ -0.53
SOX2-OT-216ENST00000497122 PLPP6Q8IY26 295 aa11.74□□□□□ -0.53
SOX2-OT-216ENST00000497122 GPHNQ9NQX3 736 aaPredicted RBP11.73□□□□□ -0.53
SOX2-OT-216ENST00000497122 SLC34A2O95436 690 aa11.72□□□□□ -0.53
SOX2-OT-216ENST00000497122 DNAJC5Q9H3Z4 198 aa11.72□□□□□ -0.53
SOX2-OT-216ENST00000497122 PLCB2Q00722 1185 aa11.71□□□□□ -0.53
SOX2-OT-216ENST00000497122 DSG2Q14126 1118 aa11.71□□□□□ -0.53
SOX2-OT-216ENST00000497122 LHX6Q9UPM6 363 aa11.71□□□□□ -0.53
SOX2-OT-216ENST00000497122 FOXK1P85037 733 aa11.7□□□□□ -0.54
SOX2-OT-216ENST00000497122 ANKRD13DQ6ZTN6 518 aa11.7□□□□□ -0.54
SOX2-OT-216ENST00000497122 HAP1P54257 671 aaPredicted RBP11.69□□□□□ -0.54
SOX2-OT-216ENST00000497122 GTPBP6O43824 516 aaPredicted RBP11.64□□□□□ -0.55
SOX2-OT-216ENST00000497122 TBC1D12O60347 775 aa11.64□□□□□ -0.55
SOX2-OT-216ENST00000497122 UPF1Q92900 1129 aaKnown RBP eCLIP11.64□□□□□ -0.55
SOX2-OT-216ENST00000497122 PTCD2Q8WV60 388 aaKnown RBP11.63□□□□□ -0.55
SOX2-OT-216ENST00000497122 AXIN2Q9Y2T1 843 aa11.63□□□□□ -0.55
SOX2-OT-216ENST00000497122 RNF166Q96A37 237 aaPredicted RBP11.62□□□□□ -0.55
SOX2-OT-216ENST00000497122 MYT1LQ9UL68 1186 aa11.62□□□□□ -0.55
SOX2-OT-216ENST00000497122 LSM11P83369 360 aaKnown RBP eCLIP11.61□□□□□ -0.55
SOX2-OT-216ENST00000497122 PPP1R15BQ5SWA1 713 aa11.6□□□□□ -0.55
SOX2-OT-216ENST00000497122 PDE4AP27815 886 aa11.59□□□□□ -0.55
SOX2-OT-216ENST00000497122 PBX2P40425 430 aa11.59□□□□□ -0.55
SOX2-OT-216ENST00000497122 CRISPLD2Q9H0B8 497 aa11.59□□□□□ -0.55
SOX2-OT-216ENST00000497122 PSDA5PKW4 1024 aaPredicted RBP11.58□□□□□ -0.56
SOX2-OT-216ENST00000497122 NCKAP5LQ9HCH0 1330 aa11.57□□□□□ -0.56
SOX2-OT-216ENST00000497122 LARP6Q9BRS8 491 aaKnown RBP11.56□□□□□ -0.56
SOX2-OT-216ENST00000497122 PTGER2P43116 358 aa11.54□□□□□ -0.56
SOX2-OT-216ENST00000497122 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
SOX2-OT-216ENST00000497122 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
SOX2-OT-216ENST00000497122 ARHGAP33O14559 1287 aa11.52□□□□□ -0.57
SOX2-OT-216ENST00000497122 POTEEQ6S8J3 1075 aa11.52□□□□□ -0.57
SOX2-OT-216ENST00000497122 OXER1Q8TDS5 423 aa11.52□□□□□ -0.57
SOX2-OT-216ENST00000497122 BCANQ96GW7 911 aa11.52□□□□□ -0.57
SOX2-OT-216ENST00000497122 KDM4FA0A1W2PPD8 638 aa11.51□□□□□ -0.57
SOX2-OT-216ENST00000497122 PRKCSHP14314 528 aaPredicted RBP11.51□□□□□ -0.57
SOX2-OT-216ENST00000497122 PSEN2P49810 448 aa11.49□□□□□ -0.57
SOX2-OT-216ENST00000497122 KCNH8Q96L42 1107 aa11.49□□□□□ -0.57
SOX2-OT-216ENST00000497122 ZNF454Q8N9F8 522 aa11.48□□□□□ -0.57
SOX2-OT-216ENST00000497122 KCNK17Q96T54 332 aa11.47□□□□□ -0.57
SOX2-OT-216ENST00000497122 ADGRD1Q6QNK2 874 aa11.46□□□□□ -0.57
SOX2-OT-216ENST00000497122 DMRTA1Q5VZB9 504 aa11.45□□□□□ -0.58
SOX2-OT-216ENST00000497122 CADPS2Q86UW7 1296 aa11.45□□□□□ -0.58
SOX2-OT-216ENST00000497122 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
SOX2-OT-216ENST00000497122 BBXQ8WY36 941 aaPredicted RBP11.44□□□□□ -0.58
SOX2-OT-216ENST00000497122 EVI5O60447 810 aa11.43□□□□□ -0.58
SOX2-OT-216ENST00000497122 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
SOX2-OT-216ENST00000497122 MFSD10Q14728 455 aa11.41□□□□□ -0.58
SOX2-OT-216ENST00000497122 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
SOX2-OT-216ENST00000497122 EMILIN3Q9NT22 766 aa11.37□□□□□ -0.59
SOX2-OT-216ENST00000497122 TK2O00142 265 aa11.36□□□□□ -0.59
SOX2-OT-216ENST00000497122 FOSBP53539 338 aa11.36□□□□□ -0.59
SOX2-OT-216ENST00000497122 VSIG10Q8N0Z9 540 aa11.36□□□□□ -0.59
SOX2-OT-216ENST00000497122 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
SOX2-OT-216ENST00000497122 PTPREP23469 700 aa11.35□□□□□ -0.59
SOX2-OT-216ENST00000497122 JPH4Q96JJ6 628 aa11.35□□□□□ -0.59
SOX2-OT-216ENST00000497122 BCL2L12Q9HB09 334 aa11.34□□□□□ -0.59
SOX2-OT-216ENST00000497122 ZDHHC16Q969W1 377 aa11.33□□□□□ -0.6
SOX2-OT-216ENST00000497122 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
SOX2-OT-216ENST00000497122 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
SOX2-OT-216ENST00000497122 PAXIP1Q6ZW49 1069 aaPredicted RBP11.31□□□□□ -0.6
SOX2-OT-216ENST00000497122 KCTD12Q96CX2 325 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-216ENST00000497122 HRO43593 1189 aa11.3□□□□□ -0.6
SOX2-OT-216ENST00000497122 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
SOX2-OT-216ENST00000497122 ADAM33Q9BZ11 813 aa11.3□□□□□ -0.6
SOX2-OT-216ENST00000497122 VPS9D1Q9Y2B5 631 aa11.3□□□□□ -0.6
SOX2-OT-216ENST00000497122 DPYSL4O14531 572 aa11.29□□□□□ -0.6
SOX2-OT-216ENST00000497122 HCSTQ9UBK5 93 aa11.29□□□□□ -0.6
SOX2-OT-216ENST00000497122 PCDHGA10Q9Y5H3 936 aa11.25□□□□□ -0.61
SOX2-OT-216ENST00000497122 GOLGA8CPA6NN73 597 aa11.24□□□□□ -0.61
SOX2-OT-216ENST00000497122 CAMK2BQ13554 666 aa11.23□□□□□ -0.61
SOX2-OT-216ENST00000497122 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms