RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 C2orf72A6NCS6 295 aa12.73□□□□□ -0.37
RAB3GAP1-206ENST00000497080 HOXB3P14651 431 aaPredicted RBP12.73□□□□□ -0.37
RAB3GAP1-206ENST00000497080 BBXQ8WY36 941 aaPredicted RBP12.72□□□□□ -0.37
RAB3GAP1-206ENST00000497080 KIF3CO14782 793 aa12.7□□□□□ -0.38
RAB3GAP1-206ENST00000497080 TMC2Q8TDI7 906 aa12.7□□□□□ -0.38
RAB3GAP1-206ENST00000497080 DOK7Q18PE1 504 aa12.68□□□□□ -0.38
RAB3GAP1-206ENST00000497080 ZNF710Q8N1W2 664 aa12.67□□□□□ -0.38
RAB3GAP1-206ENST00000497080 MARVELD3Q96A59 401 aa12.67□□□□□ -0.38
RAB3GAP1-206ENST00000497080 RIMBP2O15034 1052 aa12.62□□□□□ -0.39
RAB3GAP1-206ENST00000497080 GPHNQ9NQX3 736 aaPredicted RBP12.61□□□□□ -0.39
RAB3GAP1-206ENST00000497080 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
RAB3GAP1-206ENST00000497080 HOXB1P14653 301 aaPredicted RBP12.58□□□□□ -0.4
RAB3GAP1-206ENST00000497080 EMP3P54852 163 aa12.58□□□□□ -0.4
RAB3GAP1-206ENST00000497080 SPRYD3Q8NCJ5 442 aa12.58□□□□□ -0.4
RAB3GAP1-206ENST00000497080 DSG2Q14126 1118 aa12.56□□□□□ -0.4
RAB3GAP1-206ENST00000497080 GPR153Q6NV75 609 aa12.56□□□□□ -0.4
RAB3GAP1-206ENST00000497080 FOXK1P85037 733 aa12.55□□□□□ -0.4
RAB3GAP1-206ENST00000497080 ARSIQ5FYB1 569 aa12.55□□□□□ -0.4
RAB3GAP1-206ENST00000497080 PLPP6Q8IY26 295 aa12.55□□□□□ -0.4
RAB3GAP1-206ENST00000497080 ZSWIM6Q9HCJ5 1215 aa12.55□□□□□ -0.4
RAB3GAP1-206ENST00000497080 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
RAB3GAP1-206ENST00000497080 CFAP44Q96MT7 982 aa12.54□□□□□ -0.4
RAB3GAP1-206ENST00000497080 CRISPLD2Q9H0B8 497 aa12.54□□□□□ -0.4
RAB3GAP1-206ENST00000497080 FAM205CA6NFA0 338 aa12.53□□□□□ -0.4
RAB3GAP1-206ENST00000497080 PDE4AP27815 886 aa12.53□□□□□ -0.4
RAB3GAP1-206ENST00000497080 NCKAP5LQ9HCH0 1330 aa12.53□□□□□ -0.4
RAB3GAP1-206ENST00000497080 CADPS2Q86UW7 1296 aa12.52□□□□□ -0.41
RAB3GAP1-206ENST00000497080 KHSRPQ92945 711 aaKnown RBP eCLIP12.52□□□□□ -0.41
RAB3GAP1-206ENST00000497080 CDAN1Q8IWY9 1227 aa12.51□□□□□ -0.41
RAB3GAP1-206ENST00000497080 POTEB3A0JP26 581 aa12.5□□□□□ -0.41
RAB3GAP1-206ENST00000497080 SLC34A2O95436 690 aa12.5□□□□□ -0.41
RAB3GAP1-206ENST00000497080 POTEBQ6S5H4 581 aa12.5□□□□□ -0.41
RAB3GAP1-206ENST00000497080 PLSCR2Q9NRY7 297 aa12.5□□□□□ -0.41
RAB3GAP1-206ENST00000497080 PCDH10Q9P2E7 1040 aa12.5□□□□□ -0.41
RAB3GAP1-206ENST00000497080 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
RAB3GAP1-206ENST00000497080 ERBB3P21860 1342 aa12.47□□□□□ -0.41
RAB3GAP1-206ENST00000497080 HS3ST6Q96QI5 342 aa12.47□□□□□ -0.41
RAB3GAP1-206ENST00000497080 PCDHGA4Q9Y5G9 962 aa12.47□□□□□ -0.41
RAB3GAP1-206ENST00000497080 PPP1R15BQ5SWA1 713 aa12.46□□□□□ -0.41
RAB3GAP1-206ENST00000497080 NUDT7P0C024 238 aa12.43□□□□□ -0.42
RAB3GAP1-206ENST00000497080 PTCD2Q8WV60 388 aaKnown RBP12.42□□□□□ -0.42
RAB3GAP1-206ENST00000497080 DDX27Q96GQ7 796 aaKnown RBP12.42□□□□□ -0.42
RAB3GAP1-206ENST00000497080 VARS2Q5ST30 1063 aaKnown RBP12.41□□□□□ -0.42
RAB3GAP1-206ENST00000497080 MFSD10Q14728 455 aa12.39□□□□□ -0.43
RAB3GAP1-206ENST00000497080 ZNF316A6NFI3 1004 aaPredicted RBP12.38□□□□□ -0.43
RAB3GAP1-206ENST00000497080 UPF1Q92900 1129 aaKnown RBP eCLIP12.38□□□□□ -0.435e-8■■■□□ 18.7
RAB3GAP1-206ENST00000497080 TBC1D12O60347 775 aa12.37□□□□□ -0.43
RAB3GAP1-206ENST00000497080 OXER1Q8TDS5 423 aa12.36□□□□□ -0.43
RAB3GAP1-206ENST00000497080 LHX6Q9UPM6 363 aa12.35□□□□□ -0.43
RAB3GAP1-206ENST00000497080 KDM4FA0A1W2PPD8 638 aa12.33□□□□□ -0.44
RAB3GAP1-206ENST00000497080 ZNF687Q8N1G0 1237 aa12.31□□□□□ -0.44
RAB3GAP1-206ENST00000497080 KRTAP3-3Q9BYR6 98 aa12.3□□□□□ -0.44
RAB3GAP1-206ENST00000497080 KRTAP3-2Q9BYR7 98 aa12.3□□□□□ -0.44
RAB3GAP1-206ENST00000497080 EMILIN3Q9NT22 766 aa12.29□□□□□ -0.44
RAB3GAP1-206ENST00000497080 TSHZ2Q9NRE2 1034 aa12.28□□□□□ -0.44
RAB3GAP1-206ENST00000497080 MAP3K9P80192 1104 aa12.26□□□□□ -0.45
RAB3GAP1-206ENST00000497080 CAMK2BQ13554 666 aa12.23□□□□□ -0.45
RAB3GAP1-206ENST00000497080 EVI5O60447 810 aa12.22□□□□□ -0.45
RAB3GAP1-206ENST00000497080 WDR70Q9NW82 654 aa12.22□□□□□ -0.45
RAB3GAP1-206ENST00000497080 PSDA5PKW4 1024 aaPredicted RBP12.21□□□□□ -0.45
RAB3GAP1-206ENST00000497080 ANO8Q9HCE9 1232 aaPredicted RBP12.2□□□□□ -0.46
RAB3GAP1-206ENST00000497080 SPNS2Q8IVW8 549 aa12.19□□□□□ -0.46
RAB3GAP1-206ENST00000497080 PLCB2Q00722 1185 aa12.18□□□□□ -0.46
RAB3GAP1-206ENST00000497080 AXIN2Q9Y2T1 843 aa12.18□□□□□ -0.46
RAB3GAP1-206ENST00000497080 DPYSL4O14531 572 aa12.17□□□□□ -0.46
RAB3GAP1-206ENST00000497080 POTEEQ6S8J3 1075 aa12.17□□□□□ -0.46
RAB3GAP1-206ENST00000497080 E2F4Q16254 413 aa12.16□□□□□ -0.46
RAB3GAP1-206ENST00000497080 PPP4R3BQ5MIZ7 849 aa12.16□□□□□ -0.46
RAB3GAP1-206ENST00000497080 ZNF454Q8N9F8 522 aa12.15□□□□□ -0.46
RAB3GAP1-206ENST00000497080 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
RAB3GAP1-206ENST00000497080 PBX2P40425 430 aa12.13□□□□□ -0.47
RAB3GAP1-206ENST00000497080 FOSBP53539 338 aa12.12□□□□□ -0.47
RAB3GAP1-206ENST00000497080 ARHGAP33O14559 1287 aa12.11□□□□□ -0.47
RAB3GAP1-206ENST00000497080 LSM11P83369 360 aaKnown RBP eCLIP12.11□□□□□ -0.47
RAB3GAP1-206ENST00000497080 MMRN1Q13201 1228 aa12.1□□□□□ -0.47
RAB3GAP1-206ENST00000497080 PSEN2P49810 448 aa12.09□□□□□ -0.47
RAB3GAP1-206ENST00000497080 JPH4Q96JJ6 628 aa12.08□□□□□ -0.48
RAB3GAP1-206ENST00000497080 ZDHHC16Q969W1 377 aa12.06□□□□□ -0.48
RAB3GAP1-206ENST00000497080 DMRTA1Q5VZB9 504 aa12.05□□□□□ -0.48
RAB3GAP1-206ENST00000497080 KCNK17Q96T54 332 aa12.05□□□□□ -0.48
RAB3GAP1-206ENST00000497080 PCDHGA10Q9Y5H3 936 aa12.05□□□□□ -0.48
RAB3GAP1-206ENST00000497080 ADAM33Q9BZ11 813 aa12.04□□□□□ -0.48
RAB3GAP1-206ENST00000497080 BCL2L12Q9HB09 334 aa12.04□□□□□ -0.48
RAB3GAP1-206ENST00000497080 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
RAB3GAP1-206ENST00000497080 ARIH1Q9Y4X5 557 aaPredicted RBP12.03□□□□□ -0.48
RAB3GAP1-206ENST00000497080 SPDYE16A6NNV3 312 aaPredicted RBP12.02□□□□□ -0.49
RAB3GAP1-206ENST00000497080 DDX12PQ92771 950 aa12.02□□□□□ -0.49
RAB3GAP1-206ENST00000497080 PHF14O94880 888 aa12.01□□□□□ -0.49
RAB3GAP1-206ENST00000497080 PDIA6Q15084 440 aa12.01□□□□□ -0.49
RAB3GAP1-206ENST00000497080 KCNH8Q96L42 1107 aa12.01□□□□□ -0.49
RAB3GAP1-206ENST00000497080 PTPREP23469 700 aa12□□□□□ -0.49
RAB3GAP1-206ENST00000497080 PTGER2P43116 358 aa12□□□□□ -0.49
RAB3GAP1-206ENST00000497080 TYW1BQ6NUM6 668 aa12□□□□□ -0.49
RAB3GAP1-206ENST00000497080 ADGRD1Q6QNK2 874 aa11.98□□□□□ -0.49
RAB3GAP1-206ENST00000497080 FBXW7Q969H0 707 aa11.97□□□□□ -0.49
RAB3GAP1-206ENST00000497080 EPAS1Q99814 870 aa11.97□□□□□ -0.49
RAB3GAP1-206ENST00000497080 KCNV2Q8TDN2 545 aa11.96□□□□□ -0.49
RAB3GAP1-206ENST00000497080 MYT1LQ9UL68 1186 aa11.96□□□□□ -0.49
RAB3GAP1-206ENST00000497080 TK2O00142 265 aa11.95□□□□□ -0.5
RAB3GAP1-206ENST00000497080 RBM33Q96EV2 1170 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms