RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 SIGLEC1Q9BZZ2 1709 aa31.64■■■□□ 2.66
COL20A1-208ENST00000496810 ARHGAP5Q13017 1502 aa31.64■■■□□ 2.66
COL20A1-208ENST00000496810 POGZQ7Z3K3 1410 aa31.63■■■□□ 2.65
COL20A1-208ENST00000496810 CDC42BPAQ5VT25 1732 aa31.62■■■□□ 2.65
COL20A1-208ENST00000496810 SCAPERQ9BY12 1400 aa31.61■■■□□ 2.65
COL20A1-208ENST00000496810 ADAMTSL3P82987 1691 aa31.6■■■□□ 2.65
COL20A1-208ENST00000496810 YEATS2Q9ULM3 1422 aa31.59■■■□□ 2.65
COL20A1-208ENST00000496810 ZFYVE16Q7Z3T8 1539 aa31.59■■■□□ 2.65
COL20A1-208ENST00000496810 BCORL1Q5H9F3 1711 aa31.58■■■□□ 2.65
COL20A1-208ENST00000496810 EFCAB2Q5VUJ9 269 aa31.53■■■□□ 2.64
COL20A1-208ENST00000496810 MADDQ8WXG6 1647 aa31.52■■■□□ 2.64
COL20A1-208ENST00000496810 LOC105371045A0A1W2PR82 267 aa31.51■■■□□ 2.63
COL20A1-208ENST00000496810 ABCC1P33527 1531 aa31.5■■■□□ 2.63
COL20A1-208ENST00000496810 ITSN2Q9NZM3 1697 aa31.49■■■□□ 2.63
COL20A1-208ENST00000496810 KDM5CP41229 1560 aa31.49■■■□□ 2.63
COL20A1-208ENST00000496810 MAGI2Q86UL8 1455 aa31.47■■■□□ 2.63
COL20A1-208ENST00000496810 ARHGEF12Q9NZN5 1544 aa31.46■■■□□ 2.63
COL20A1-208ENST00000496810 ZNF518AQ6AHZ1 1483 aa31.45■■■□□ 2.62
COL20A1-208ENST00000496810 HECW2Q9P2P5 1572 aa31.43■■■□□ 2.62
COL20A1-208ENST00000496810 SAMD9LQ8IVG5 1584 aa31.43■■■□□ 2.62
COL20A1-208ENST00000496810 ARID4BQ4LE39 1312 aaPredicted RBP31.42■■■□□ 2.62
COL20A1-208ENST00000496810 RIMS1Q86UR5 1692 aaKnown RBP31.41■■■□□ 2.62
COL20A1-208ENST00000496810 PTPRMP28827 1452 aa31.4■■■□□ 2.62
COL20A1-208ENST00000496810 GPATCH8Q9UKJ3 1502 aaKnown RBP31.4■■■□□ 2.62
COL20A1-208ENST00000496810 TRAPPC8Q9Y2L5 1435 aa31.39■■■□□ 2.62
COL20A1-208ENST00000496810 EHBP1L1Q8N3D4 1523 aa31.39■■■□□ 2.61
COL20A1-208ENST00000496810 ABCA6Q8N139 1617 aa31.38■■■□□ 2.61
COL20A1-208ENST00000496810 AFAP1Q8N556 730 aa31.37■■■□□ 2.61
COL20A1-208ENST00000496810 DIP2CQ9Y2E4 1556 aa31.37■■■□□ 2.61
COL20A1-208ENST00000496810 MTUS2Q5JR59 1369 aa31.36■■■□□ 2.61
COL20A1-208ENST00000496810 TIAM1Q13009 1591 aa31.35■■■□□ 2.61
COL20A1-208ENST00000496810 SYCP2Q9BX26 1530 aa31.34■■■□□ 2.61
COL20A1-208ENST00000496810 ATP10AO60312 1499 aa31.33■■■□□ 2.61
COL20A1-208ENST00000496810 C9orf84Q5VXU9 1444 aa31.32■■■□□ 2.61
COL20A1-208ENST00000496810 FER1L4A9Z1Z3 1794 aa31.32■■■□□ 2.6
COL20A1-208ENST00000496810 KIDINS220Q9ULH0 1771 aa31.3■■■□□ 2.6
COL20A1-208ENST00000496810 VPS8Q8N3P4 1428 aa31.29■■■□□ 2.6
COL20A1-208ENST00000496810 MLH3Q9UHC1 1453 aa31.27■■■□□ 2.6
COL20A1-208ENST00000496810 ZNF777Q9ULD5 760 aaPredicted RBP31.26■■■□□ 2.59
COL20A1-208ENST00000496810 CCNB3Q8WWL7 1395 aa31.26■■■□□ 2.59
COL20A1-208ENST00000496810 REREQ9P2R6 1566 aa31.24■■■□□ 2.59
COL20A1-208ENST00000496810 MLECQ14165 292 aa31.23■■■□□ 2.59
COL20A1-208ENST00000496810 SUPT6HQ7KZ85 1726 aaKnown RBP31.22■■■□□ 2.59
COL20A1-208ENST00000496810 CFDP1Q9UEE9 299 aaPredicted RBP31.18■■■□□ 2.58
COL20A1-208ENST00000496810 NCOA2Q15596 1464 aa31.18■■■□□ 2.58
COL20A1-208ENST00000496810 INO80Q9ULG1 1556 aaPredicted RBP31.17■■■□□ 2.58
COL20A1-208ENST00000496810 MYT1LQ9UL68 1186 aa31.17■■■□□ 2.58
COL20A1-208ENST00000496810 HNRNPMP52272 730 aaKnown RBP eCLIP31.15■■■□□ 2.58
COL20A1-208ENST00000496810 KIAA1107Q9UPP5 1409 aa31.15■■■□□ 2.58
COL20A1-208ENST00000496810 ZNF644Q9H582 1327 aaPredicted RBP31.14■■■□□ 2.58
COL20A1-208ENST00000496810 PLEKHH2Q8IVE3 1493 aa31.14■■■□□ 2.57
COL20A1-208ENST00000496810 ATP7AQ04656 1500 aa31.13■■■□□ 2.57
COL20A1-208ENST00000496810 LRRC9Q6ZRR7 1453 aa31.11■■■□□ 2.57
COL20A1-208ENST00000496810 LMTK3Q96Q04 1460 aa31.1■■■□□ 2.57
COL20A1-208ENST00000496810 PLPPR3Q6T4P5 718 aa31.1■■■□□ 2.57
COL20A1-208ENST00000496810 AGLP35573 1532 aa31.09■■■□□ 2.57
COL20A1-208ENST00000496810 MBD5Q9P267 1494 aa31.07■■■□□ 2.56
COL20A1-208ENST00000496810 PLXNC1O60486 1568 aa31.05■■■□□ 2.56
COL20A1-208ENST00000496810 SPAG9O60271 1321 aaKnown RBP31.04■■■□□ 2.56
COL20A1-208ENST00000496810 CAMSAP2Q08AD1 1489 aa31.04■■■□□ 2.56
COL20A1-208ENST00000496810 MAP3K1Q13233 1512 aa31.03■■■□□ 2.56
COL20A1-208ENST00000496810 KANK4Q5T7N3 995 aaPredicted RBP31.01■■■□□ 2.55
COL20A1-208ENST00000496810 C3P01024 1663 aa31■■■□□ 2.55
COL20A1-208ENST00000496810 ADGBQ8N7X0 1667 aa30.99■■■□□ 2.55
COL20A1-208ENST00000496810 CEBPAP49715 358 aaPredicted RBP30.95■■■□□ 2.55
COL20A1-208ENST00000496810 PREX1Q8TCU6 1659 aa30.94■■■□□ 2.54
COL20A1-208ENST00000496810 A2MP01023 1474 aa30.94■■■□□ 2.54
COL20A1-208ENST00000496810 CCDC141Q6ZP82 1450 aa30.93■■■□□ 2.54
COL20A1-208ENST00000496810 ARHGEF5Q12774 1597 aa30.9■■■□□ 2.54
COL20A1-208ENST00000496810 HSPA2P54652 639 aa30.87■■■□□ 2.53
COL20A1-208ENST00000496810 CLTCQ00610 1675 aaKnown RBP30.87■■■□□ 2.53
COL20A1-208ENST00000496810 MROH2AA6NES4 1674 aa30.86■■■□□ 2.53
COL20A1-208ENST00000496810 RTEL1-TNFRSF6BF6WH68 1400 aa30.84■■■□□ 2.53
COL20A1-208ENST00000496810 MYOM3Q5VTT5 1437 aa30.84■■■□□ 2.53
COL20A1-208ENST00000496810 CNTLNQ9NXG0 1405 aa30.79■■■□□ 2.52
COL20A1-208ENST00000496810 SETD1BQ9UPS6 1966 aaKnown RBP30.78■■■□□ 2.52
COL20A1-208ENST00000496810 MAST1Q9Y2H9 1570 aa30.75■■■□□ 2.51
COL20A1-208ENST00000496810 MIA2Q96PC5 1412 aa30.75■■■□□ 2.51
COL20A1-208ENST00000496810 ESF1Q9H501 851 aaKnown RBP30.73■■■□□ 2.51
COL20A1-208ENST00000496810 CROCC2H7BZ55 1655 aa30.73■■■□□ 2.51
COL20A1-208ENST00000496810 PTPN23Q9H3S7 1636 aa30.73■■■□□ 2.51
COL20A1-208ENST00000496810 DHX29Q7Z478 1369 aaKnown RBP30.72■■■□□ 2.51
COL20A1-208ENST00000496810 UHRF1BP1Q6BDS2 1440 aa30.72■■■□□ 2.51
COL20A1-208ENST00000496810 GGT6Q6P531 493 aa30.7■■■□□ 2.51
COL20A1-208ENST00000496810 STRCQ7RTU9 1775 aa30.69■■■□□ 2.5
COL20A1-208ENST00000496810 APLP2Q06481 763 aa30.68■■■□□ 2.5
COL20A1-208ENST00000496810 ZMYM3Q14202 1370 aa30.67■■■□□ 2.5
COL20A1-208ENST00000496810 RSPH4AQ5TD94 716 aa30.67■■■□□ 2.5
COL20A1-208ENST00000496810 MYO3AQ8NEV4 1616 aa30.65■■■□□ 2.5
COL20A1-208ENST00000496810 FGD6Q6ZV73 1430 aa30.64■■■□□ 2.49
COL20A1-208ENST00000496810 NPATQ14207 1427 aa30.63■■■□□ 2.49
COL20A1-208ENST00000496810 PTPRKQ15262 1439 aa30.61■■■□□ 2.49
COL20A1-208ENST00000496810 DNMT1P26358 1616 aaKnown RBP30.61■■■□□ 2.49
COL20A1-208ENST00000496810 RNF17Q9BXT8 1623 aaKnown RBP30.61■■■□□ 2.49
COL20A1-208ENST00000496810 KIF3BO15066 747 aa30.6■■■□□ 2.49
COL20A1-208ENST00000496810 TSPY4P0CV99 314 aa30.6■■■□□ 2.49
COL20A1-208ENST00000496810 TSPY10P0CW01 314 aa30.6■■■□□ 2.49
COL20A1-208ENST00000496810 TCOF1Q13428 1488 aaKnown RBP30.6■■■□□ 2.49
COL20A1-208ENST00000496810 KDM5DQ9BY66 1539 aa30.6■■■□□ 2.49
COL20A1-208ENST00000496810 ZNF142P52746 1687 aaPredicted RBP30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms