RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 CREBRFQ8IUR6 639 aa6.48□□□□□ -1.37
NF1-216ENST00000495910 TPM1P09493 284 aa6.48□□□□□ -1.37
NF1-216ENST00000495910 TPM2P07951 284 aa6.47□□□□□ -1.37
NF1-216ENST00000495910 RASSF8Q8NHQ8 419 aa6.47□□□□□ -1.37
NF1-216ENST00000495910 INCENPQ9NQS7 918 aa6.47□□□□□ -1.37
NF1-216ENST00000495910 ARGLU1Q9NWB6 273 aaPredicted RBP6.47□□□□□ -1.37
NF1-216ENST00000495910 KIAA1211Q6ZU35 1233 aa6.47□□□□□ -1.37
NF1-216ENST00000495910 KIF3AQ9Y496 699 aa6.46□□□□□ -1.37
NF1-216ENST00000495910 ZNF777Q9ULD5 760 aaPredicted RBP6.46□□□□□ -1.38
NF1-216ENST00000495910 HSP90B2PQ58FF3 399 aa6.45□□□□□ -1.38
NF1-216ENST00000495910 EIF4G2P78344 907 aaKnown RBP eCLIP6.45□□□□□ -1.38
NF1-216ENST00000495910 TPD52L1Q16890 204 aaPredicted RBP6.45□□□□□ -1.38
NF1-216ENST00000495910 C14orf37Q86TY3 774 aa6.45□□□□□ -1.38
NF1-216ENST00000495910 SEPT11Q9NVA2 429 aaKnown RBP6.45□□□□□ -1.38
NF1-216ENST00000495910 SUPT16HQ9Y5B9 1047 aaKnown RBP6.45□□□□□ -1.38
NF1-216ENST00000495910 BCCIPQ9P287 314 aaKnown RBP eCLIP6.45□□□□□ -1.38
NF1-216ENST00000495910 MAPK8IP3Q9UPT6 1336 aa6.44□□□□□ -1.38
NF1-216ENST00000495910 MTERF4Q7Z6M4 381 aaKnown RBP6.44□□□□□ -1.38
NF1-216ENST00000495910 FAM13BQ9NYF5 915 aa6.44□□□□□ -1.38
NF1-216ENST00000495910 PES1O00541 588 aaKnown RBP6.44□□□□□ -1.38
NF1-216ENST00000495910 FRAT1Q92837 279 aaPredicted RBP6.44□□□□□ -1.38
NF1-216ENST00000495910 ZNF592Q92610 1267 aa6.43□□□□□ -1.38
NF1-216ENST00000495910 IPO7O95373 1038 aaKnown RBP6.43□□□□□ -1.38
NF1-216ENST00000495910 ANO8Q9HCE9 1232 aaPredicted RBP6.43□□□□□ -1.38
NF1-216ENST00000495910 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.43□□□□□ -1.38
NF1-216ENST00000495910 ERCC4Q92889 916 aaPredicted RBP6.43□□□□□ -1.38
NF1-216ENST00000495910 GOLGA6L19H0YKK7 550 aa6.43□□□□□ -1.38
NF1-216ENST00000495910 TAF3Q5VWG9 929 aa6.43□□□□□ -1.38
NF1-216ENST00000495910 GOLGA6L7A0A1B0GV03 622 aa6.43□□□□□ -1.38
NF1-216ENST00000495910 USP8P40818 1118 aa6.43□□□□□ -1.38
NF1-216ENST00000495910 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
NF1-216ENST00000495910 TSPYL1Q9H0U9 437 aa6.42□□□□□ -1.38
NF1-216ENST00000495910 HAP1P54257 671 aaPredicted RBP6.42□□□□□ -1.38
NF1-216ENST00000495910 WWC1Q8IX03 1113 aa6.42□□□□□ -1.38
NF1-216ENST00000495910 MIER1Q8N108 512 aa6.42□□□□□ -1.38
NF1-216ENST00000495910 CSRNP3Q8WYN3 585 aa6.42□□□□□ -1.38
NF1-216ENST00000495910 LEKR1Q6ZMV7 388 aa6.41□□□□□ -1.38
NF1-216ENST00000495910 GIMAP7Q8NHV1 300 aa6.41□□□□□ -1.38
NF1-216ENST00000495910 DDX11L8A8MPP1 907 aa6.41□□□□□ -1.38
NF1-216ENST00000495910 TCERG1O14776 1098 aaKnown RBP6.41□□□□□ -1.38
NF1-216ENST00000495910 PLPPR3Q6T4P5 718 aa6.41□□□□□ -1.38
NF1-216ENST00000495910 NUDCQ9Y266 331 aa6.41□□□□□ -1.38
NF1-216ENST00000495910 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.41□□□□□ -1.38
NF1-216ENST00000495910 TIMELESSQ9UNS1 1208 aa6.41□□□□□ -1.38
NF1-216ENST00000495910 SLKQ9H2G2 1235 aaPredicted RBP6.41□□□□□ -1.38
NF1-216ENST00000495910 MARCH6O60337 910 aa6.41□□□□□ -1.38
NF1-216ENST00000495910 MNS1Q8NEH6 495 aa6.4□□□□□ -1.38
NF1-216ENST00000495910 MYO6Q9UM54 1294 aa6.4□□□□□ -1.38
NF1-216ENST00000495910 BECN2A8MW95 431 aa6.4□□□□□ -1.38
NF1-216ENST00000495910 HOMER1Q86YM7 354 aa6.4□□□□□ -1.39
NF1-216ENST00000495910 KIF16BQ96L93 1317 aa6.4□□□□□ -1.39
NF1-216ENST00000495910 SF3A1Q15459 793 aaKnown RBP6.4□□□□□ -1.39
NF1-216ENST00000495910 DEF6Q9H4E7 631 aa6.4□□□□□ -1.39
NF1-216ENST00000495910 RBM19Q9Y4C8 960 aaKnown RBP6.4□□□□□ -1.39
NF1-216ENST00000495910 CAGE1Q8TC20 777 aa6.39□□□□□ -1.39
NF1-216ENST00000495910 KIAA0754O94854 1291 aa6.39□□□□□ -1.39
NF1-216ENST00000495910 CLASRPQ8N2M8 674 aaKnown RBP6.39□□□□□ -1.39
NF1-216ENST00000495910 SKOR2Q2VWA4 1001 aaPredicted RBP6.39□□□□□ -1.39
NF1-216ENST00000495910 ANKRD20A12PQ8NF67 263 aa6.39□□□□□ -1.39
NF1-216ENST00000495910 PCMTD1Q96MG8 357 aaPredicted RBP6.39□□□□□ -1.39
NF1-216ENST00000495910 CCDC173Q0VFZ6 552 aa6.39□□□□□ -1.39
NF1-216ENST00000495910 PLEKHG5O94827 1062 aa6.39□□□□□ -1.39
NF1-216ENST00000495910 CDCA8Q53HL2 280 aa6.38□□□□□ -1.39
NF1-216ENST00000495910 CNKSR2Q8WXI2 1034 aa6.38□□□□□ -1.39
NF1-216ENST00000495910 ANKRD18AQ8IVF6 992 aa6.38□□□□□ -1.39
NF1-216ENST00000495910 KDM2AQ9Y2K7 1162 aa6.38□□□□□ -1.39
NF1-216ENST00000495910 VPS53Q5VIR6 699 aa6.38□□□□□ -1.39
NF1-216ENST00000495910 B4GALNT3Q6L9W6 998 aa6.38□□□□□ -1.39
NF1-216ENST00000495910 KNSTRNQ9Y448 316 aa6.38□□□□□ -1.39
NF1-216ENST00000495910 NEUROD2Q15784 382 aa6.37□□□□□ -1.39
NF1-216ENST00000495910 CCDC47Q96A33 483 aaKnown RBP6.37□□□□□ -1.39
NF1-216ENST00000495910 ODF2Q5BJF6 829 aa6.37□□□□□ -1.39
NF1-216ENST00000495910 CCAR1Q8IX12 1150 aaKnown RBP6.37□□□□□ -1.39
NF1-216ENST00000495910 CHMP4CQ96CF2 233 aa6.37□□□□□ -1.39
NF1-216ENST00000495910 DIAPH3Q9NSV4 1193 aa6.37□□□□□ -1.39
NF1-216ENST00000495910 EZRP15311 586 aaKnown RBP6.36□□□□□ -1.39
NF1-216ENST00000495910 HSP90AB2PQ58FF8 381 aa6.36□□□□□ -1.39
NF1-216ENST00000495910 CT47A1Q5JQC4 288 aaPredicted RBP6.36□□□□□ -1.39
NF1-216ENST00000495910 DCAF1Q9Y4B6 1507 aa6.36□□□□□ -1.39
NF1-216ENST00000495910 NF2P35240 595 aa6.36□□□□□ -1.39
NF1-216ENST00000495910 FAM43AQ8N2R8 423 aa6.36□□□□□ -1.39
NF1-216ENST00000495910 ZCCHC6Q5VYS8 1495 aaKnown RBP6.35□□□□□ -1.39
NF1-216ENST00000495910 NAP1L1P55209 391 aaKnown RBP6.35□□□□□ -1.39
NF1-216ENST00000495910 GPATCH3Q96I76 525 aa6.35□□□□□ -1.39
NF1-216ENST00000495910 IPO9Q96P70 1041 aaKnown RBP6.35□□□□□ -1.39
NF1-216ENST00000495910 RALBP1Q15311 655 aa6.35□□□□□ -1.39
NF1-216ENST00000495910 RSPH4AQ5TD94 716 aa6.35□□□□□ -1.39
NF1-216ENST00000495910 ATP6V1DQ9Y5K8 247 aa6.35□□□□□ -1.39
NF1-216ENST00000495910 FBLN2P98095 1184 aa6.35□□□□□ -1.39
NF1-216ENST00000495910 GSE1Q14687 1217 aa6.35□□□□□ -1.39
NF1-216ENST00000495910 SPATA24Q86W54 205 aa6.35□□□□□ -1.39
NF1-216ENST00000495910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.35□□□□□ -1.391e-7■■■■□ 25.2
NF1-216ENST00000495910 ARID3CA6NKF2 412 aa6.34□□□□□ -1.39
NF1-216ENST00000495910 CCDC175P0C221 793 aa6.34□□□□□ -1.39
NF1-216ENST00000495910 ST18O60284 1047 aa6.34□□□□□ -1.39
NF1-216ENST00000495910 RWDD1Q9H446 243 aaPredicted RBP6.34□□□□□ -1.39
NF1-216ENST00000495910 H3BQV1 296 aa6.34□□□□□ -1.39
NF1-216ENST00000495910 AXDND1Q5T1B0 1012 aaPredicted RBP6.34□□□□□ -1.39
NF1-216ENST00000495910 IFFO2Q5TF58 517 aa6.34□□□□□ -1.39
NF1-216ENST00000495910 TMX4Q9H1E5 349 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms