RNA–Protein interactions for RNA: ENST00000495471.1

CCNL1-225, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-225ENST00000495471 KIF3CO14782 793 aa11.6□□□□□ -0.55
CCNL1-225ENST00000495471 RYDENQ9NUL5 291 aaKnown RBP11.6□□□□□ -0.55
CCNL1-225ENST00000495471 C2orf72A6NCS6 295 aa11.59□□□□□ -0.55
CCNL1-225ENST00000495471 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
CCNL1-225ENST00000495471 MARVELD3Q96A59 401 aa11.57□□□□□ -0.56
CCNL1-225ENST00000495471 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
CCNL1-225ENST00000495471 TMC2Q8TDI7 906 aa11.54□□□□□ -0.56
CCNL1-225ENST00000495471 RIMBP2O15034 1052 aa11.5□□□□□ -0.57
CCNL1-225ENST00000495471 EMP3P54852 163 aa11.5□□□□□ -0.57
CCNL1-225ENST00000495471 BBXQ8WY36 941 aaPredicted RBP11.5□□□□□ -0.57
CCNL1-225ENST00000495471 HOXB1P14653 301 aaPredicted RBP11.49□□□□□ -0.57
CCNL1-225ENST00000495471 GPHNQ9NQX3 736 aaPredicted RBP11.47□□□□□ -0.57
CCNL1-225ENST00000495471 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.57
CCNL1-225ENST00000495471 GPR153Q6NV75 609 aa11.45□□□□□ -0.58
CCNL1-225ENST00000495471 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
CCNL1-225ENST00000495471 PCDH10Q9P2E7 1040 aa11.45□□□□□ -0.58
CCNL1-225ENST00000495471 POTEB3A0JP26 581 aa11.43□□□□□ -0.58
CCNL1-225ENST00000495471 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
CCNL1-225ENST00000495471 FOXK1P85037 733 aa11.43□□□□□ -0.58
CCNL1-225ENST00000495471 DSG2Q14126 1118 aa11.43□□□□□ -0.58
CCNL1-225ENST00000495471 ARSIQ5FYB1 569 aa11.43□□□□□ -0.58
CCNL1-225ENST00000495471 POTEBQ6S5H4 581 aa11.43□□□□□ -0.58
CCNL1-225ENST00000495471 CRISPLD2Q9H0B8 497 aa11.43□□□□□ -0.58
CCNL1-225ENST00000495471 PLPP6Q8IY26 295 aa11.42□□□□□ -0.58
CCNL1-225ENST00000495471 NCKAP5LQ9HCH0 1330 aa11.41□□□□□ -0.58
CCNL1-225ENST00000495471 KHSRPQ92945 711 aaKnown RBP eCLIP11.41□□□□□ -0.581e-24■□□□□ 9.3
CCNL1-225ENST00000495471 HS3ST6Q96QI5 342 aa11.41□□□□□ -0.58
CCNL1-225ENST00000495471 SLC34A2O95436 690 aa11.4□□□□□ -0.58
CCNL1-225ENST00000495471 CADPS2Q86UW7 1296 aa11.38□□□□□ -0.59
CCNL1-225ENST00000495471 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.38□□□□□ -0.59
CCNL1-225ENST00000495471 ERBB3P21860 1342 aa11.37□□□□□ -0.59
CCNL1-225ENST00000495471 PCDHGA4Q9Y5G9 962 aa11.37□□□□□ -0.59
CCNL1-225ENST00000495471 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
CCNL1-225ENST00000495471 PDE4AP27815 886 aa11.35□□□□□ -0.59
CCNL1-225ENST00000495471 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
CCNL1-225ENST00000495471 NUDT7P0C024 238 aa11.33□□□□□ -0.6
CCNL1-225ENST00000495471 VARS2Q5ST30 1063 aaKnown RBP11.33□□□□□ -0.6
CCNL1-225ENST00000495471 LARP6Q9BRS8 491 aaKnown RBP11.33□□□□□ -0.6
CCNL1-225ENST00000495471 PAXIP1Q6ZW49 1069 aaPredicted RBP11.32□□□□□ -0.6
CCNL1-225ENST00000495471 PTCD2Q8WV60 388 aaKnown RBP11.32□□□□□ -0.6
CCNL1-225ENST00000495471 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
CCNL1-225ENST00000495471 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
CCNL1-225ENST00000495471 MFSD10Q14728 455 aa11.3□□□□□ -0.6
CCNL1-225ENST00000495471 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
CCNL1-225ENST00000495471 ZNF316A6NFI3 1004 aaPredicted RBP11.29□□□□□ -0.6
CCNL1-225ENST00000495471 KRTAP3-3Q9BYR6 98 aa11.28□□□□□ -0.6
CCNL1-225ENST00000495471 KRTAP3-2Q9BYR7 98 aa11.28□□□□□ -0.6
CCNL1-225ENST00000495471 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCNL1-225ENST00000495471 KDM4FA0A1W2PPD8 638 aa11.26□□□□□ -0.61
CCNL1-225ENST00000495471 OXER1Q8TDS5 423 aa11.26□□□□□ -0.61
CCNL1-225ENST00000495471 LHX6Q9UPM6 363 aa11.26□□□□□ -0.61
CCNL1-225ENST00000495471 ZNF687Q8N1G0 1237 aa11.23□□□□□ -0.61
CCNL1-225ENST00000495471 TBC1D12O60347 775 aa11.22□□□□□ -0.61
CCNL1-225ENST00000495471 EMILIN3Q9NT22 766 aa11.19□□□□□ -0.62
CCNL1-225ENST00000495471 SPNS2Q8IVW8 549 aa11.17□□□□□ -0.62
CCNL1-225ENST00000495471 CAMK2BQ13554 666 aa11.14□□□□□ -0.63
CCNL1-225ENST00000495471 PSDA5PKW4 1024 aaPredicted RBP11.13□□□□□ -0.63
CCNL1-225ENST00000495471 POTEEQ6S8J3 1075 aa11.13□□□□□ -0.63
CCNL1-225ENST00000495471 EVI5O60447 810 aa11.12□□□□□ -0.63
CCNL1-225ENST00000495471 MAP3K9P80192 1104 aa11.12□□□□□ -0.63
CCNL1-225ENST00000495471 TSHZ2Q9NRE2 1034 aa11.11□□□□□ -0.63
CCNL1-225ENST00000495471 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
CCNL1-225ENST00000495471 AXIN2Q9Y2T1 843 aa11.1□□□□□ -0.63
CCNL1-225ENST00000495471 PPP4R3BQ5MIZ7 849 aa11.09□□□□□ -0.63
CCNL1-225ENST00000495471 PBX2P40425 430 aa11.08□□□□□ -0.64
CCNL1-225ENST00000495471 MMRN1Q13201 1228 aa11.08□□□□□ -0.64
CCNL1-225ENST00000495471 DPYSL4O14531 572 aa11.07□□□□□ -0.64
CCNL1-225ENST00000495471 LSM11P83369 360 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCNL1-225ENST00000495471 ZNF454Q8N9F8 522 aa11.06□□□□□ -0.64
CCNL1-225ENST00000495471 FOSBP53539 338 aa11.05□□□□□ -0.64
CCNL1-225ENST00000495471 ANKRD13DQ6ZTN6 518 aa11.05□□□□□ -0.64
CCNL1-225ENST00000495471 ARHGAP33O14559 1287 aa11.03□□□□□ -0.64
CCNL1-225ENST00000495471 JPH4Q96JJ6 628 aa11.03□□□□□ -0.64
CCNL1-225ENST00000495471 WDR70Q9NW82 654 aa11.03□□□□□ -0.64
CCNL1-225ENST00000495471 PSEN2P49810 448 aa11.02□□□□□ -0.65
CCNL1-225ENST00000495471 E2F4Q16254 413 aa11.02□□□□□ -0.65
CCNL1-225ENST00000495471 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
CCNL1-225ENST00000495471 DMRTA1Q5VZB9 504 aa11□□□□□ -0.65
CCNL1-225ENST00000495471 KCNK17Q96T54 332 aa10.99□□□□□ -0.65
CCNL1-225ENST00000495471 BCL2L12Q9HB09 334 aa10.98□□□□□ -0.65
CCNL1-225ENST00000495471 PCDHGA10Q9Y5H3 936 aa10.98□□□□□ -0.65
CCNL1-225ENST00000495471 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
CCNL1-225ENST00000495471 ADAM33Q9BZ11 813 aa10.97□□□□□ -0.65
CCNL1-225ENST00000495471 PDIA6Q15084 440 aa10.96□□□□□ -0.65
CCNL1-225ENST00000495471 ADGRD1Q6QNK2 874 aa10.94□□□□□ -0.66
CCNL1-225ENST00000495471 MYT1LQ9UL68 1186 aa10.94□□□□□ -0.66
CCNL1-225ENST00000495471 ARIH1Q9Y4X5 557 aaPredicted RBP10.94□□□□□ -0.66
CCNL1-225ENST00000495471 PHF14O94880 888 aa10.93□□□□□ -0.66
CCNL1-225ENST00000495471 PTGER2P43116 358 aa10.93□□□□□ -0.66
CCNL1-225ENST00000495471 KCNH8Q96L42 1107 aa10.93□□□□□ -0.66
CCNL1-225ENST00000495471 PTPREP23469 700 aa10.92□□□□□ -0.66
CCNL1-225ENST00000495471 DDX12PQ92771 950 aa10.92□□□□□ -0.66
CCNL1-225ENST00000495471 SPDYE16A6NNV3 312 aaPredicted RBP10.91□□□□□ -0.66
CCNL1-225ENST00000495471 TK2O00142 265 aa10.91□□□□□ -0.66
CCNL1-225ENST00000495471 TYW1BQ6NUM6 668 aa10.91□□□□□ -0.66
CCNL1-225ENST00000495471 RNF166Q96A37 237 aaPredicted RBP10.91□□□□□ -0.66
CCNL1-225ENST00000495471 FBXW7Q969H0 707 aa10.89□□□□□ -0.67
CCNL1-225ENST00000495471 HRO43593 1189 aa10.88□□□□□ -0.67
CCNL1-225ENST00000495471 EPAS1Q99814 870 aa10.88□□□□□ -0.67
CCNL1-225ENST00000495471 KCNV2Q8TDN2 545 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms