RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 POTEFA5A3E0 1075 aa12.8□□□□□ -0.36
SMC2-205ENST00000493955 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
SMC2-205ENST00000493955 PDE4AP27815 886 aa12.78□□□□□ -0.36
SMC2-205ENST00000493955 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
SMC2-205ENST00000493955 MFSD10Q14728 455 aa12.76□□□□□ -0.37
SMC2-205ENST00000493955 CRISPLD2Q9H0B8 497 aa12.75□□□□□ -0.37
SMC2-205ENST00000493955 TESPA1A2RU30 521 aaPredicted RBP12.74□□□□□ -0.37
SMC2-205ENST00000493955 SEMA3EO15041 775 aa12.74□□□□□ -0.37
SMC2-205ENST00000493955 TIE1P35590 1138 aa12.74□□□□□ -0.37
SMC2-205ENST00000493955 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
SMC2-205ENST00000493955 MKRN3Q13064 507 aaKnown RBP12.72□□□□□ -0.37
SMC2-205ENST00000493955 DDX27Q96GQ7 796 aaKnown RBP12.72□□□□□ -0.37
SMC2-205ENST00000493955 SEC24BO95487 1268 aa12.7□□□□□ -0.38
SMC2-205ENST00000493955 ZC3H15Q8WU90 426 aaKnown RBP12.7□□□□□ -0.38
SMC2-205ENST00000493955 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
SMC2-205ENST00000493955 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
SMC2-205ENST00000493955 ARIH1Q9Y4X5 557 aaPredicted RBP12.69□□□□□ -0.38
SMC2-205ENST00000493955 TTLL13PA6NNM8 815 aa12.68□□□□□ -0.38
SMC2-205ENST00000493955 SMYD5Q6GMV2 418 aa12.66□□□□□ -0.38
SMC2-205ENST00000493955 CAMK2BQ13554 666 aa12.65□□□□□ -0.38
SMC2-205ENST00000493955 TIMELESSQ9UNS1 1208 aa12.62□□□□□ -0.39
SMC2-205ENST00000493955 ILDR1Q86SU0 546 aaPredicted RBP12.62□□□□□ -0.39
SMC2-205ENST00000493955 BRPF1P55201 1214 aaPredicted RBP12.61□□□□□ -0.39
SMC2-205ENST00000493955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.61□□□□□ -0.395e-7■■■■□ 26.6
SMC2-205ENST00000493955 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
SMC2-205ENST00000493955 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
SMC2-205ENST00000493955 PPP1R15BQ5SWA1 713 aa12.57□□□□□ -0.4
SMC2-205ENST00000493955 IER5LQ5T953 404 aa12.57□□□□□ -0.4
SMC2-205ENST00000493955 ERICH6Q7L0X2 663 aa12.56□□□□□ -0.4
SMC2-205ENST00000493955 SLC24A3Q9HC58 644 aa12.56□□□□□ -0.4
SMC2-205ENST00000493955 GPHNQ9NQX3 736 aaPredicted RBP12.56□□□□□ -0.4
SMC2-205ENST00000493955 ZMYND10O75800 440 aa12.54□□□□□ -0.4
SMC2-205ENST00000493955 SLAIN1Q8ND83 568 aa12.53□□□□□ -0.4
SMC2-205ENST00000493955 NEUROD2Q15784 382 aa12.52□□□□□ -0.41
SMC2-205ENST00000493955 ST18O60284 1047 aa12.49□□□□□ -0.41
SMC2-205ENST00000493955 MLLT3P42568 568 aaPredicted RBP12.47□□□□□ -0.41
SMC2-205ENST00000493955 BARGINQ6ZT62 677 aa12.47□□□□□ -0.41
SMC2-205ENST00000493955 MICALL2Q8IY33 904 aa12.47□□□□□ -0.41
SMC2-205ENST00000493955 DSG2Q14126 1118 aa12.46□□□□□ -0.41
SMC2-205ENST00000493955 DPY19L2Q6NUT2 758 aa12.46□□□□□ -0.41
SMC2-205ENST00000493955 PLCG2P16885 1265 aa12.45□□□□□ -0.42
SMC2-205ENST00000493955 GPIHBP1Q8IV16 184 aa12.45□□□□□ -0.42
SMC2-205ENST00000493955 EMILIN3Q9NT22 766 aa12.45□□□□□ -0.42
SMC2-205ENST00000493955 DPYSL4O14531 572 aa12.45□□□□□ -0.42
SMC2-205ENST00000493955 RBM26Q5T8P6 1007 aaKnown RBP12.45□□□□□ -0.42
SMC2-205ENST00000493955 TMC2Q8TDI7 906 aa12.45□□□□□ -0.42
SMC2-205ENST00000493955 SPDYE16A6NNV3 312 aaPredicted RBP12.44□□□□□ -0.42
SMC2-205ENST00000493955 PDIA6Q15084 440 aa12.44□□□□□ -0.42
SMC2-205ENST00000493955 PDCD7Q8N8D1 485 aaKnown RBP12.44□□□□□ -0.42
SMC2-205ENST00000493955 FOXK1P85037 733 aa12.43□□□□□ -0.42
SMC2-205ENST00000493955 IRX5P78411 483 aaPredicted RBP12.39□□□□□ -0.43
SMC2-205ENST00000493955 AK7Q96M32 723 aa12.38□□□□□ -0.43
SMC2-205ENST00000493955 C14orf37Q86TY3 774 aa12.37□□□□□ -0.43
SMC2-205ENST00000493955 TMEM121BQ9BXQ6 578 aaPredicted RBP12.37□□□□□ -0.43
SMC2-205ENST00000493955 OCEL1Q9H607 264 aa12.37□□□□□ -0.43
SMC2-205ENST00000493955 BOLA1Q9Y3E2 137 aa12.37□□□□□ -0.43
SMC2-205ENST00000493955 PLPP6Q8IY26 295 aa12.36□□□□□ -0.43
SMC2-205ENST00000493955 G3V3G9 751 aa12.35□□□□□ -0.43
SMC2-205ENST00000493955 KRI1Q8N9T8 703 aaKnown RBP12.35□□□□□ -0.43
SMC2-205ENST00000493955 C2orf72A6NCS6 295 aa12.34□□□□□ -0.43
SMC2-205ENST00000493955 KIF3CO14782 793 aa12.32□□□□□ -0.44
SMC2-205ENST00000493955 MMRN1Q13201 1228 aa12.28□□□□□ -0.44
SMC2-205ENST00000493955 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.28□□□□□ -0.44
SMC2-205ENST00000493955 SNPHO15079 494 aa12.28□□□□□ -0.44
SMC2-205ENST00000493955 MAP3K9P80192 1104 aa12.28□□□□□ -0.44
SMC2-205ENST00000493955 SPNS2Q8IVW8 549 aa12.28□□□□□ -0.44
SMC2-205ENST00000493955 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
SMC2-205ENST00000493955 GPBP1L1Q9HC44 474 aaPredicted RBP12.27□□□□□ -0.45
SMC2-205ENST00000493955 GPR37O15354 613 aa12.26□□□□□ -0.45
SMC2-205ENST00000493955 MARVELD3Q96A59 401 aa12.26□□□□□ -0.45
SMC2-205ENST00000493955 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
SMC2-205ENST00000493955 TRIM66O15016 1216 aa12.25□□□□□ -0.45
SMC2-205ENST00000493955 GRXCR2A6NFK2 248 aa12.24□□□□□ -0.45
SMC2-205ENST00000493955 PDE4DQ08499 809 aa12.22□□□□□ -0.45
SMC2-205ENST00000493955 UPF1Q92900 1129 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMC2-205ENST00000493955 KDM4CQ9H3R0 1056 aa12.22□□□□□ -0.45
SMC2-205ENST00000493955 NUTM2FA1L443 756 aa12.2□□□□□ -0.46
SMC2-205ENST00000493955 OXER1Q8TDS5 423 aa12.2□□□□□ -0.46
SMC2-205ENST00000493955 TMEM92Q6UXU6 159 aa12.19□□□□□ -0.46
SMC2-205ENST00000493955 MINK1Q8N4C8 1332 aaPredicted RBP12.17□□□□□ -0.46
SMC2-205ENST00000493955 OSBPP22059 807 aa12.17□□□□□ -0.46
SMC2-205ENST00000493955 PTGER2P43116 358 aa12.17□□□□□ -0.46
SMC2-205ENST00000493955 MAP2K5Q13163 448 aa12.16□□□□□ -0.46
SMC2-205ENST00000493955 IL27Q8NEV9 243 aa12.16□□□□□ -0.46
SMC2-205ENST00000493955 TBC1D12O60347 775 aa12.14□□□□□ -0.47
SMC2-205ENST00000493955 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
SMC2-205ENST00000493955 DDX12PQ92771 950 aa12.13□□□□□ -0.47
SMC2-205ENST00000493955 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
SMC2-205ENST00000493955 GNPATO15228 680 aa12.12□□□□□ -0.47
SMC2-205ENST00000493955 EMP3P54852 163 aa12.12□□□□□ -0.47
SMC2-205ENST00000493955 ARXQ96QS3 562 aa12.12□□□□□ -0.47
SMC2-205ENST00000493955 FCHSD2O94868 740 aa12.11□□□□□ -0.47
SMC2-205ENST00000493955 HIC1Q14526 733 aa12.11□□□□□ -0.47
SMC2-205ENST00000493955 IRF6O14896 467 aa12.11□□□□□ -0.47
SMC2-205ENST00000493955 ZNF316A6NFI3 1004 aaPredicted RBP12.1□□□□□ -0.47
SMC2-205ENST00000493955 EVI5O60447 810 aa12.1□□□□□ -0.47
SMC2-205ENST00000493955 AMHR2Q16671 573 aa12.08□□□□□ -0.48
SMC2-205ENST00000493955 PTCD2Q8WV60 388 aaKnown RBP12.06□□□□□ -0.48
SMC2-205ENST00000493955 FAM117AQ9C073 453 aa12.05□□□□□ -0.48
SMC2-205ENST00000493955 POTEB3A0JP26 581 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms