RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 TRIM41Q8WV44 630 aa8.27□□□□□ -1.09
CLIP4-211ENST00000491701 SHROOM4Q9ULL8 1493 aa8.26□□□□□ -1.09
CLIP4-211ENST00000491701 UNC13AQ9UPW8 1703 aa8.26□□□□□ -1.09
CLIP4-211ENST00000491701 RB1CC1Q8TDY2 1594 aa8.25□□□□□ -1.09
CLIP4-211ENST00000491701 G3V3G9 751 aa8.25□□□□□ -1.09
CLIP4-211ENST00000491701 HOXB1P14653 301 aaPredicted RBP8.22□□□□□ -1.09
CLIP4-211ENST00000491701 DAXXQ9UER7 740 aaPredicted RBP8.21□□□□□ -1.09
CLIP4-211ENST00000491701 ZNF710Q8N1W2 664 aa8.2□□□□□ -1.1
CLIP4-211ENST00000491701 SCRIBQ14160 1630 aa8.2□□□□□ -1.1
CLIP4-211ENST00000491701 BICRAQ9NZM4 1560 aa8.2□□□□□ -1.1
CLIP4-211ENST00000491701 RIOK3O14730 519 aaKnown RBP8.2□□□□□ -1.1
CLIP4-211ENST00000491701 EFCAB3Q8N7B9 438 aa8.2□□□□□ -1.1
CLIP4-211ENST00000491701 DOK7Q18PE1 504 aa8.19□□□□□ -1.1
CLIP4-211ENST00000491701 ERBB3P21860 1342 aa8.18□□□□□ -1.1
CLIP4-211ENST00000491701 RNF25Q96BH1 459 aaPredicted RBP8.18□□□□□ -1.1
CLIP4-211ENST00000491701 CHGAP10645 457 aaKnown RBP8.17□□□□□ -1.1
CLIP4-211ENST00000491701 TPRNQ4KMQ1 711 aa8.17□□□□□ -1.1
CLIP4-211ENST00000491701 TMEM92Q6UXU6 159 aa8.17□□□□□ -1.1
CLIP4-211ENST00000491701 VSIG10Q8N0Z9 540 aa8.17□□□□□ -1.1
CLIP4-211ENST00000491701 VARS2Q5ST30 1063 aaKnown RBP8.14□□□□□ -1.11
CLIP4-211ENST00000491701 MICALL2Q8IY33 904 aa8.13□□□□□ -1.11
CLIP4-211ENST00000491701 STK25O00506 426 aa8.12□□□□□ -1.11
CLIP4-211ENST00000491701 VGFO15240 615 aaPredicted RBP8.12□□□□□ -1.11
CLIP4-211ENST00000491701 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.12□□□□□ -1.11
CLIP4-211ENST00000491701 RIMBP2O15034 1052 aa8.12□□□□□ -1.11
CLIP4-211ENST00000491701 ZFP91Q96JP5 570 aaPredicted RBP8.12□□□□□ -1.11
CLIP4-211ENST00000491701 RNF166Q96A37 237 aaPredicted RBP8.11□□□□□ -1.11
CLIP4-211ENST00000491701 MS4A4AQ96JQ5 239 aa8.11□□□□□ -1.11
CLIP4-211ENST00000491701 STK24Q9Y6E0 443 aa8.11□□□□□ -1.11
CLIP4-211ENST00000491701 GPR153Q6NV75 609 aa8.1□□□□□ -1.11
CLIP4-211ENST00000491701 BCL11BQ9C0K0 894 aaPredicted RBP8.09□□□□□ -1.11
CLIP4-211ENST00000491701 ZSWIM6Q9HCJ5 1215 aa8.09□□□□□ -1.11
CLIP4-211ENST00000491701 ZNF687Q8N1G0 1237 aa8.08□□□□□ -1.12
CLIP4-211ENST00000491701 ARXQ96QS3 562 aa8.08□□□□□ -1.12
CLIP4-211ENST00000491701 SOX12O15370 315 aa8.07□□□□□ -1.12
CLIP4-211ENST00000491701 PHF8Q9UPP1 1060 aa8.07□□□□□ -1.12
CLIP4-211ENST00000491701 CECR2Q9BXF3 1484 aa8.07□□□□□ -1.12
CLIP4-211ENST00000491701 MYT1LQ9UL68 1186 aa8.06□□□□□ -1.12
CLIP4-211ENST00000491701 TIMELESSQ9UNS1 1208 aa8.05□□□□□ -1.12
CLIP4-211ENST00000491701 ARSIQ5FYB1 569 aa8.03□□□□□ -1.12
CLIP4-211ENST00000491701 HS6ST3Q8IZP7 471 aa8.03□□□□□ -1.12
CLIP4-211ENST00000491701 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.03□□□□□ -1.12
CLIP4-211ENST00000491701 KHSRPQ92945 711 aaKnown RBP eCLIP8.02□□□□□ -1.13
CLIP4-211ENST00000491701 CFAP44Q96MT7 982 aa8.02□□□□□ -1.13
CLIP4-211ENST00000491701 BBXQ8WY36 941 aaPredicted RBP8.01□□□□□ -1.13
CLIP4-211ENST00000491701 TULP1O00294 542 aaPredicted RBP8□□□□□ -1.13
CLIP4-211ENST00000491701 PAXIP1Q6ZW49 1069 aaPredicted RBP7.99□□□□□ -1.13
CLIP4-211ENST00000491701 KDM2AQ9Y2K7 1162 aa7.99□□□□□ -1.13
CLIP4-211ENST00000491701 MROH2BQ7Z745 1585 aa7.98□□□□□ -1.13
CLIP4-211ENST00000491701 RSF1Q96T23 1441 aaPredicted RBP7.98□□□□□ -1.13
CLIP4-211ENST00000491701 ZNF316A6NFI3 1004 aaPredicted RBP7.98□□□□□ -1.13
CLIP4-211ENST00000491701 ANKRD13DQ6ZTN6 518 aa7.98□□□□□ -1.13
CLIP4-211ENST00000491701 PTGER2P43116 358 aa7.96□□□□□ -1.13
CLIP4-211ENST00000491701 FBXO22Q8NEZ5 403 aa7.96□□□□□ -1.13
CLIP4-211ENST00000491701 NLRP6P59044 892 aa7.95□□□□□ -1.14
CLIP4-211ENST00000491701 LSM11P83369 360 aaKnown RBP eCLIP7.94□□□□□ -1.14
CLIP4-211ENST00000491701 NKX1-1Q15270 411 aaPredicted RBP7.94□□□□□ -1.14
CLIP4-211ENST00000491701 SPRYD3Q8NCJ5 442 aa7.94□□□□□ -1.14
CLIP4-211ENST00000491701 KIF3CO14782 793 aa7.93□□□□□ -1.14
CLIP4-211ENST00000491701 GTF3C3Q9Y5Q9 886 aa7.93□□□□□ -1.14
CLIP4-211ENST00000491701 ERICH6Q7L0X2 663 aa7.92□□□□□ -1.14
CLIP4-211ENST00000491701 MFRPQ9BY79 579 aa7.92□□□□□ -1.14
CLIP4-211ENST00000491701 C2orf72A6NCS6 295 aa7.91□□□□□ -1.14
CLIP4-211ENST00000491701 NUDT7P0C024 238 aa7.91□□□□□ -1.14
CLIP4-211ENST00000491701 POTEEQ6S8J3 1075 aa7.91□□□□□ -1.14
CLIP4-211ENST00000491701 SMARCA4P51532 1647 aa7.9□□□□□ -1.14
CLIP4-211ENST00000491701 WIZO95785 1651 aa7.9□□□□□ -1.14
CLIP4-211ENST00000491701 SUPT5HO00267 1087 aaKnown RBP7.89□□□□□ -1.15
CLIP4-211ENST00000491701 LHX6Q9UPM6 363 aa7.88□□□□□ -1.15
CLIP4-211ENST00000491701 AXIN2Q9Y2T1 843 aa7.88□□□□□ -1.15
CLIP4-211ENST00000491701 BAZ1AQ9NRL2 1556 aaPredicted RBP7.87□□□□□ -1.15
CLIP4-211ENST00000491701 GTPBP6O43824 516 aaPredicted RBP7.86□□□□□ -1.15
CLIP4-211ENST00000491701 RYDENQ9NUL5 291 aaKnown RBP7.86□□□□□ -1.15
CLIP4-211ENST00000491701 PBX2P40425 430 aa7.86□□□□□ -1.15
CLIP4-211ENST00000491701 HOMEZQ8IX15 550 aa7.86□□□□□ -1.15
CLIP4-211ENST00000491701 DNAJC5Q9H3Z4 198 aa7.86□□□□□ -1.15
CLIP4-211ENST00000491701 PCDHGA4Q9Y5G9 962 aa7.86□□□□□ -1.15
CLIP4-211ENST00000491701 PEG3Q9GZU2 1588 aa7.84□□□□□ -1.15
CLIP4-211ENST00000491701 SLC34A2O95436 690 aa7.84□□□□□ -1.15
CLIP4-211ENST00000491701 CC2D2AQ9P2K1 1620 aa7.83□□□□□ -1.16
CLIP4-211ENST00000491701 EIF4G1Q04637 1599 aaKnown RBP7.83□□□□□ -1.16
CLIP4-211ENST00000491701 ATAD2BQ9ULI0 1458 aa7.81□□□□□ -1.16
CLIP4-211ENST00000491701 PPP1R37O75864 691 aa7.81□□□□□ -1.16
CLIP4-211ENST00000491701 TSHZ2Q9NRE2 1034 aa7.8□□□□□ -1.16
CLIP4-211ENST00000491701 PLA2G2EQ9NZK7 142 aa7.8□□□□□ -1.16
CLIP4-211ENST00000491701 ADGRD1Q6QNK2 874 aa7.79□□□□□ -1.16
CLIP4-211ENST00000491701 TMC2Q8TDI7 906 aa7.79□□□□□ -1.16
CLIP4-211ENST00000491701 HCSTQ9UBK5 93 aa7.78□□□□□ -1.16
CLIP4-211ENST00000491701 NCAPD3P42695 1498 aa7.77□□□□□ -1.17
CLIP4-211ENST00000491701 KDM4FA0A1W2PPD8 638 aa7.77□□□□□ -1.17
CLIP4-211ENST00000491701 ARHGAP33O14559 1287 aa7.77□□□□□ -1.17
CLIP4-211ENST00000491701 TOP2AP11388 1531 aaKnown RBP7.75□□□□□ -1.17
CLIP4-211ENST00000491701 TMEM132AQ24JP5 1023 aa7.75□□□□□ -1.17
CLIP4-211ENST00000491701 DMRTA1Q5VZB9 504 aa7.75□□□□□ -1.17
CLIP4-211ENST00000491701 HRO43593 1189 aa7.74□□□□□ -1.17
CLIP4-211ENST00000491701 PSEN2P49810 448 aa7.74□□□□□ -1.17
CLIP4-211ENST00000491701 NBR1Q14596 966 aa7.74□□□□□ -1.17
CLIP4-211ENST00000491701 CCDC88BA6NC98 1476 aa7.73□□□□□ -1.17
CLIP4-211ENST00000491701 PSDA5PKW4 1024 aaPredicted RBP7.73□□□□□ -1.17
CLIP4-211ENST00000491701 SMARCA2P51531 1590 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms