RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 FBXO22Q8NEZ5 403 aa4.8□□□□□ -1.64
SNRNP40-207ENST00000491106 PPP1R37O75864 691 aa4.79□□□□□ -1.64
SNRNP40-207ENST00000491106 CDAN1Q8IWY9 1227 aa4.79□□□□□ -1.64
SNRNP40-207ENST00000491106 TMEM121BQ9BXQ6 578 aaPredicted RBP4.79□□□□□ -1.64
SNRNP40-207ENST00000491106 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.79□□□□□ -1.64
SNRNP40-207ENST00000491106 C2orf72A6NCS6 295 aa4.77□□□□□ -1.65
SNRNP40-207ENST00000491106 ARSIQ5FYB1 569 aa4.76□□□□□ -1.65
SNRNP40-207ENST00000491106 CFAP44Q96MT7 982 aa4.76□□□□□ -1.65
SNRNP40-207ENST00000491106 RTN4Q9NQC3 1192 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-207ENST00000491106 PCDH10Q9P2E7 1040 aa4.76□□□□□ -1.65
SNRNP40-207ENST00000491106 TBC1D12O60347 775 aa4.75□□□□□ -1.65
SNRNP40-207ENST00000491106 TMEM92Q6UXU6 159 aa4.74□□□□□ -1.65
SNRNP40-207ENST00000491106 PDE4AP27815 886 aa4.73□□□□□ -1.65
SNRNP40-207ENST00000491106 NKX1-1Q15270 411 aaPredicted RBP4.73□□□□□ -1.65
SNRNP40-207ENST00000491106 HOXB3P14651 431 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-207ENST00000491106 HOXB1P14653 301 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-207ENST00000491106 VARS2Q5ST30 1063 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-207ENST00000491106 LCE2DQ5TA82 110 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-207ENST00000491106 PAXIP1Q6ZW49 1069 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-207ENST00000491106 PLPP6Q8IY26 295 aa4.72□□□□□ -1.65
SNRNP40-207ENST00000491106 SPRYD3Q8NCJ5 442 aa4.72□□□□□ -1.65
SNRNP40-207ENST00000491106 BBXQ8WY36 941 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-207ENST00000491106 KHSRPQ92945 711 aaKnown RBP eCLIP4.72□□□□□ -1.65
SNRNP40-207ENST00000491106 HS3ST6Q96QI5 342 aa4.72□□□□□ -1.65
SNRNP40-207ENST00000491106 LARP6Q9BRS8 491 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-207ENST00000491106 NUDT7P0C024 238 aa4.71□□□□□ -1.66
SNRNP40-207ENST00000491106 UPF1Q92900 1129 aaKnown RBP eCLIP4.71□□□□□ -1.66
SNRNP40-207ENST00000491106 ZSWIM6Q9HCJ5 1215 aa4.71□□□□□ -1.66
SNRNP40-207ENST00000491106 GTPBP6O43824 516 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-207ENST00000491106 ANKRD13DQ6ZTN6 518 aa4.7□□□□□ -1.66
SNRNP40-207ENST00000491106 GPHNQ9NQX3 736 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-207ENST00000491106 MAP3K9P80192 1104 aa4.69□□□□□ -1.66
SNRNP40-207ENST00000491106 DSG2Q14126 1118 aa4.69□□□□□ -1.66
SNRNP40-207ENST00000491106 STAC3Q96MF2 364 aa4.69□□□□□ -1.66
SNRNP40-207ENST00000491106 WDR70Q9NW82 654 aa4.69□□□□□ -1.66
SNRNP40-207ENST00000491106 PCDHGA4Q9Y5G9 962 aa4.69□□□□□ -1.66
SNRNP40-207ENST00000491106 ZNF316A6NFI3 1004 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-207ENST00000491106 GPR153Q6NV75 609 aa4.68□□□□□ -1.66
SNRNP40-207ENST00000491106 FOXK1P85037 733 aa4.67□□□□□ -1.66
SNRNP40-207ENST00000491106 PPP1R15BQ5SWA1 713 aa4.67□□□□□ -1.66
SNRNP40-207ENST00000491106 DDX27Q96GQ7 796 aaKnown RBP4.67□□□□□ -1.66
SNRNP40-207ENST00000491106 KCNH8Q96L42 1107 aa4.67□□□□□ -1.66
SNRNP40-207ENST00000491106 KIF3CO14782 793 aa4.66□□□□□ -1.66
SNRNP40-207ENST00000491106 DNAJC5Q9H3Z4 198 aa4.66□□□□□ -1.66
SNRNP40-207ENST00000491106 LHX6Q9UPM6 363 aa4.66□□□□□ -1.66
SNRNP40-207ENST00000491106 POTEB3A0JP26 581 aa4.64□□□□□ -1.67
SNRNP40-207ENST00000491106 POTEBQ6S5H4 581 aa4.64□□□□□ -1.67
SNRNP40-207ENST00000491106 ZNF687Q8N1G0 1237 aa4.64□□□□□ -1.67
SNRNP40-207ENST00000491106 SLC34A2O95436 690 aa4.63□□□□□ -1.67
SNRNP40-207ENST00000491106 PPP4R3BQ5MIZ7 849 aa4.63□□□□□ -1.67
SNRNP40-207ENST00000491106 AXIN2Q9Y2T1 843 aa4.63□□□□□ -1.67
SNRNP40-207ENST00000491106 PSDA5PKW4 1024 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-207ENST00000491106 SPNS2Q8IVW8 549 aa4.62□□□□□ -1.67
SNRNP40-207ENST00000491106 ZNF454Q8N9F8 522 aa4.62□□□□□ -1.67
SNRNP40-207ENST00000491106 PTCD2Q8WV60 388 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-207ENST00000491106 EVI5O60447 810 aa4.61□□□□□ -1.67
SNRNP40-207ENST00000491106 CADPS2Q86UW7 1296 aa4.61□□□□□ -1.67
SNRNP40-207ENST00000491106 CRISPLD2Q9H0B8 497 aa4.61□□□□□ -1.67
SNRNP40-207ENST00000491106 NCKAP5LQ9HCH0 1330 aa4.61□□□□□ -1.67
SNRNP40-207ENST00000491106 GOLGA8CPA6NN73 597 aa4.59□□□□□ -1.67
SNRNP40-207ENST00000491106 ARHGAP33O14559 1287 aa4.59□□□□□ -1.67
SNRNP40-207ENST00000491106 MMRN1Q13201 1228 aa4.59□□□□□ -1.67
SNRNP40-207ENST00000491106 KCNK17Q96T54 332 aa4.59□□□□□ -1.67
SNRNP40-207ENST00000491106 OXER1Q8TDS5 423 aa4.58□□□□□ -1.68
SNRNP40-207ENST00000491106 MYT1LQ9UL68 1186 aa4.58□□□□□ -1.68
SNRNP40-207ENST00000491106 PBX2P40425 430 aa4.57□□□□□ -1.68
SNRNP40-207ENST00000491106 PSEN2P49810 448 aa4.57□□□□□ -1.68
SNRNP40-207ENST00000491106 LSM11P83369 360 aaKnown RBP eCLIP4.57□□□□□ -1.68
SNRNP40-207ENST00000491106 KRTAP3-3Q9BYR6 98 aa4.57□□□□□ -1.68
SNRNP40-207ENST00000491106 KRTAP3-2Q9BYR7 98 aa4.57□□□□□ -1.68
SNRNP40-207ENST00000491106 DPYSL4O14531 572 aa4.56□□□□□ -1.68
SNRNP40-207ENST00000491106 PTPREP23469 700 aa4.56□□□□□ -1.68
SNRNP40-207ENST00000491106 E2F4Q16254 413 aa4.56□□□□□ -1.68
SNRNP40-207ENST00000491106 RNF166Q96A37 237 aaPredicted RBP4.56□□□□□ -1.68
SNRNP40-207ENST00000491106 RBM33Q96EV2 1170 aaKnown RBP4.56□□□□□ -1.68
SNRNP40-207ENST00000491106 GRXCR2A6NFK2 248 aa4.55□□□□□ -1.68
SNRNP40-207ENST00000491106 HAP1P54257 671 aaPredicted RBP4.55□□□□□ -1.68
SNRNP40-207ENST00000491106 DDX12PQ92771 950 aa4.55□□□□□ -1.68
SNRNP40-207ENST00000491106 ZDHHC16Q969W1 377 aa4.55□□□□□ -1.68
SNRNP40-207ENST00000491106 TSHZ2Q9NRE2 1034 aa4.55□□□□□ -1.68
SNRNP40-207ENST00000491106 MFSD10Q14728 455 aa4.54□□□□□ -1.68
SNRNP40-207ENST00000491106 EMILIN3Q9NT22 766 aa4.54□□□□□ -1.68
SNRNP40-207ENST00000491106 PTGER2P43116 358 aa4.53□□□□□ -1.68
SNRNP40-207ENST00000491106 DMRTA1Q5VZB9 504 aa4.53□□□□□ -1.68
SNRNP40-207ENST00000491106 ADGRD1Q6QNK2 874 aa4.53□□□□□ -1.68
SNRNP40-207ENST00000491106 MAP3K7O43318 606 aa4.52□□□□□ -1.69
SNRNP40-207ENST00000491106 KCTD12Q96CX2 325 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-207ENST00000491106 FOSBP53539 338 aa4.51□□□□□ -1.69
SNRNP40-207ENST00000491106 PTPN5P54829 565 aa4.51□□□□□ -1.69
SNRNP40-207ENST00000491106 NBR1Q14596 966 aa4.51□□□□□ -1.69
SNRNP40-207ENST00000491106 TYW1BQ6NUM6 668 aa4.51□□□□□ -1.69
SNRNP40-207ENST00000491106 MRPL50Q8N5N7 158 aaKnown RBP4.51□□□□□ -1.69
SNRNP40-207ENST00000491106 FBXW7Q969H0 707 aa4.51□□□□□ -1.69
SNRNP40-207ENST00000491106 ADAM33Q9BZ11 813 aa4.51□□□□□ -1.69
SNRNP40-207ENST00000491106 ANO8Q9HCE9 1232 aaPredicted RBP4.51□□□□□ -1.69
SNRNP40-207ENST00000491106 PHF14O94880 888 aa4.5□□□□□ -1.69
SNRNP40-207ENST00000491106 JPH4Q96JJ6 628 aa4.5□□□□□ -1.69
SNRNP40-207ENST00000491106 BCL2L12Q9HB09 334 aa4.5□□□□□ -1.69
SNRNP40-207ENST00000491106 PCDHGA10Q9Y5H3 936 aa4.5□□□□□ -1.69
SNRNP40-207ENST00000491106 KDM4FA0A1W2PPD8 638 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms