RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 INO80Q9ULG1 1556 aaPredicted RBP15.12■□□□□ 0.01
SUPT20H-220ENST00000490716 SUPT6HQ7KZ85 1726 aaKnown RBP15.12■□□□□ 0.01
SUPT20H-220ENST00000490716 AKNAQ7Z591 1439 aa15.12■□□□□ 0.01
SUPT20H-220ENST00000490716 POGZQ7Z3K3 1410 aa15.11■□□□□ 0.01
SUPT20H-220ENST00000490716 ABCA6Q8N139 1617 aa15.1■□□□□ 0.01
SUPT20H-220ENST00000490716 TTBK1Q5TCY1 1321 aaPredicted RBP15.1■□□□□ 0.01
SUPT20H-220ENST00000490716 MAGI2Q86UL8 1455 aa15.09■□□□□ 0.01
SUPT20H-220ENST00000490716 PLXNC1O60486 1568 aa15.09■□□□□ 0.01
SUPT20H-220ENST00000490716 DIP2CQ9Y2E4 1556 aa15.08■□□□□ 0
SUPT20H-220ENST00000490716 HECW2Q9P2P5 1572 aa15.07■□□□□ 0
SUPT20H-220ENST00000490716 LRRC9Q6ZRR7 1453 aa15.07■□□□□ 0
SUPT20H-220ENST00000490716 ADGBQ8N7X0 1667 aa15.07■□□□□ 0
SUPT20H-220ENST00000490716 CROCC2H7BZ55 1655 aa15.07■□□□□ 0
SUPT20H-220ENST00000490716 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
SUPT20H-220ENST00000490716 MBD5Q9P267 1494 aa15.05■□□□□ 0
SUPT20H-220ENST00000490716 MLH3Q9UHC1 1453 aa15.04■□□□□ -0
SUPT20H-220ENST00000490716 ARHGEF5Q12774 1597 aa15.04■□□□□ -0
SUPT20H-220ENST00000490716 PLEKHD1A6NEE1 506 aa15.03■□□□□ -0
SUPT20H-220ENST00000490716 MAST1Q9Y2H9 1570 aa15.03■□□□□ -0
SUPT20H-220ENST00000490716 KIAA1107Q9UPP5 1409 aa15.03■□□□□ -0
SUPT20H-220ENST00000490716 DENND4BO75064 1496 aaPredicted RBP15.03■□□□□ -0
SUPT20H-220ENST00000490716 ADGRL1O94910 1474 aa15.02■□□□□ -0
SUPT20H-220ENST00000490716 ZFYVE16Q7Z3T8 1539 aa15.02□□□□□ -0.01
SUPT20H-220ENST00000490716 ARHGAP5Q13017 1502 aa15□□□□□ -0.01
SUPT20H-220ENST00000490716 ZNF518AQ6AHZ1 1483 aa15□□□□□ -0.01
SUPT20H-220ENST00000490716 AGLP35573 1532 aa15□□□□□ -0.01
SUPT20H-220ENST00000490716 NCOA2Q15596 1464 aa15□□□□□ -0.01
SUPT20H-220ENST00000490716 SYCP2Q9BX26 1530 aa14.99□□□□□ -0.01
SUPT20H-220ENST00000490716 KDM4FA0A1W2PPD8 638 aa14.99□□□□□ -0.01
SUPT20H-220ENST00000490716 KCNH8Q96L42 1107 aa14.99□□□□□ -0.01
SUPT20H-220ENST00000490716 ARID3CA6NKF2 412 aa14.98□□□□□ -0.01
SUPT20H-220ENST00000490716 RANGAP1P46060 587 aaPredicted RBP14.97□□□□□ -0.01
SUPT20H-220ENST00000490716 YEATS2Q9ULM3 1422 aa14.97□□□□□ -0.01
SUPT20H-220ENST00000490716 TRAPPC8Q9Y2L5 1435 aa14.97□□□□□ -0.01
SUPT20H-220ENST00000490716 TCOF1Q13428 1488 aaKnown RBP14.97□□□□□ -0.01
SUPT20H-220ENST00000490716 MROH2AA6NES4 1674 aa14.95□□□□□ -0.02
SUPT20H-220ENST00000490716 MADDQ8WXG6 1647 aa14.95□□□□□ -0.02
SUPT20H-220ENST00000490716 EHMT2Q96KQ7 1210 aa14.95□□□□□ -0.02
SUPT20H-220ENST00000490716 SCAPERQ9BY12 1400 aa14.95□□□□□ -0.02
SUPT20H-220ENST00000490716 FER1L4A9Z1Z3 1794 aa14.94□□□□□ -0.02
SUPT20H-220ENST00000490716 CAMSAP2Q08AD1 1489 aa14.92□□□□□ -0.02
SUPT20H-220ENST00000490716 PLEKHH2Q8IVE3 1493 aa14.92□□□□□ -0.02
SUPT20H-220ENST00000490716 ATP7AQ04656 1500 aa14.92□□□□□ -0.02
SUPT20H-220ENST00000490716 CDK11AQ9UQ88 783 aaPredicted RBP14.91□□□□□ -0.02
SUPT20H-220ENST00000490716 ATP10AO60312 1499 aa14.91□□□□□ -0.02
SUPT20H-220ENST00000490716 DNMT1P26358 1616 aaKnown RBP14.91□□□□□ -0.02
SUPT20H-220ENST00000490716 RNF17Q9BXT8 1623 aaKnown RBP14.91□□□□□ -0.02
SUPT20H-220ENST00000490716 MROH1Q8NDA8 1641 aa14.9□□□□□ -0.02
SUPT20H-220ENST00000490716 MIA2Q96PC5 1412 aa14.9□□□□□ -0.02
SUPT20H-220ENST00000490716 RTEL1-TNFRSF6BF6WH68 1400 aa14.89□□□□□ -0.03
SUPT20H-220ENST00000490716 RAPGEF3O95398 923 aa14.89□□□□□ -0.03
SUPT20H-220ENST00000490716 DEPDC5O75140 1603 aa14.89□□□□□ -0.03
SUPT20H-220ENST00000490716 PTPN23Q9H3S7 1636 aa14.89□□□□□ -0.03
SUPT20H-220ENST00000490716 C9orf84Q5VXU9 1444 aa14.89□□□□□ -0.03
SUPT20H-220ENST00000490716 EIF2AK4Q9P2K8 1649 aaKnown RBP14.89□□□□□ -0.03
SUPT20H-220ENST00000490716 C3P01024 1663 aa14.88□□□□□ -0.03
SUPT20H-220ENST00000490716 KANK4Q5T7N3 995 aaPredicted RBP14.87□□□□□ -0.03
SUPT20H-220ENST00000490716 RIMS1Q86UR5 1692 aaKnown RBP14.87□□□□□ -0.03
SUPT20H-220ENST00000490716 MYOM3Q5VTT5 1437 aa14.86□□□□□ -0.03
SUPT20H-220ENST00000490716 SHANK2Q9UPX8 1470 aa14.85□□□□□ -0.03
SUPT20H-220ENST00000490716 FAM135AQ9P2D6 1515 aa14.85□□□□□ -0.03
SUPT20H-220ENST00000490716 EFCAB2Q5VUJ9 269 aa14.85□□□□□ -0.03
SUPT20H-220ENST00000490716 MTUS2Q5JR59 1369 aa14.83□□□□□ -0.04
SUPT20H-220ENST00000490716 CCDC141Q6ZP82 1450 aa14.82□□□□□ -0.04
SUPT20H-220ENST00000490716 PTPRMP28827 1452 aa14.81□□□□□ -0.04
SUPT20H-220ENST00000490716 VWDEQ8N2E2 1590 aa14.81□□□□□ -0.04
SUPT20H-220ENST00000490716 CCNB3Q8WWL7 1395 aa14.81□□□□□ -0.04
SUPT20H-220ENST00000490716 ZNF142P52746 1687 aaPredicted RBP14.8□□□□□ -0.04
SUPT20H-220ENST00000490716 ZC3H13Q5T200 1668 aaKnown RBP14.8□□□□□ -0.04
SUPT20H-220ENST00000490716 KDM5DQ9BY66 1539 aa14.79□□□□□ -0.04
SUPT20H-220ENST00000490716 ADGRL2O95490 1459 aa14.79□□□□□ -0.04
SUPT20H-220ENST00000490716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.79□□□□□ -0.04
SUPT20H-220ENST00000490716 HNRNPUL2Q1KMD3 747 aaKnown RBP14.79□□□□□ -0.04
SUPT20H-220ENST00000490716 PREX1Q8TCU6 1659 aa14.78□□□□□ -0.04
SUPT20H-220ENST00000490716 ZNF644Q9H582 1327 aaPredicted RBP14.77□□□□□ -0.04
SUPT20H-220ENST00000490716 FGD6Q6ZV73 1430 aa14.77□□□□□ -0.05
SUPT20H-220ENST00000490716 AFAP1Q8N556 730 aa14.77□□□□□ -0.05
SUPT20H-220ENST00000490716 CLTCQ00610 1675 aaKnown RBP14.76□□□□□ -0.05
SUPT20H-220ENST00000490716 PRDM15P57071 1507 aaPredicted RBP14.75□□□□□ -0.05
SUPT20H-220ENST00000490716 ABCC5O15440 1437 aa14.75□□□□□ -0.05
SUPT20H-220ENST00000490716 A2MP01023 1474 aa14.74□□□□□ -0.05
SUPT20H-220ENST00000490716 LMTK3Q96Q04 1460 aa14.74□□□□□ -0.05
SUPT20H-220ENST00000490716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.73□□□□□ -0.05
SUPT20H-220ENST00000490716 STRCQ7RTU9 1775 aa14.73□□□□□ -0.05
SUPT20H-220ENST00000490716 DAPK1P53355 1430 aa14.71□□□□□ -0.05
SUPT20H-220ENST00000490716 UNC13BO14795 1591 aa14.7□□□□□ -0.06
SUPT20H-220ENST00000490716 DUOX2Q9NRD8 1548 aa14.69□□□□□ -0.06
SUPT20H-220ENST00000490716 PTPRKQ15262 1439 aa14.69□□□□□ -0.06
SUPT20H-220ENST00000490716 CEP152O94986 1710 aa14.69□□□□□ -0.06
SUPT20H-220ENST00000490716 RRBP1Q9P2E9 1410 aaKnown RBP14.69□□□□□ -0.06
SUPT20H-220ENST00000490716 MYO3AQ8NEV4 1616 aa14.69□□□□□ -0.06
SUPT20H-220ENST00000490716 LMTK2Q8IWU2 1503 aa14.68□□□□□ -0.06
SUPT20H-220ENST00000490716 HNRNPMP52272 730 aaKnown RBP eCLIP14.68□□□□□ -0.06
SUPT20H-220ENST00000490716 CFDP1Q9UEE9 299 aaPredicted RBP14.68□□□□□ -0.06
SUPT20H-220ENST00000490716 ATP1B4Q9UN42 357 aaPredicted RBP14.68□□□□□ -0.06
SUPT20H-220ENST00000490716 DHX29Q7Z478 1369 aaKnown RBP14.68□□□□□ -0.06
SUPT20H-220ENST00000490716 CAMSAP1Q5T5Y3 1602 aa14.68□□□□□ -0.06
SUPT20H-220ENST00000490716 GCC2Q8IWJ2 1684 aa14.67□□□□□ -0.06
SUPT20H-220ENST00000490716 RSPH4AQ5TD94 716 aa14.66□□□□□ -0.06
SUPT20H-220ENST00000490716 KDM5AP29375 1690 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms