RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 BOLA1Q9Y3E2 137 aa8.1□□□□□ -1.11
AC055855.1-201ENST00000489563 C7P10643 843 aa8.09□□□□□ -1.11
AC055855.1-201ENST00000489563 COLQQ9Y215 455 aaPredicted RBP8.08□□□□□ -1.12
AC055855.1-201ENST00000489563 MFSD10Q14728 455 aa8.07□□□□□ -1.12
AC055855.1-201ENST00000489563 TMC2Q8TDI7 906 aa8.07□□□□□ -1.12
AC055855.1-201ENST00000489563 GPHNQ9NQX3 736 aaPredicted RBP8.07□□□□□ -1.12
AC055855.1-201ENST00000489563 POTEIP0CG38 1075 aa8.06□□□□□ -1.12
AC055855.1-201ENST00000489563 METRNQ9UJH8 293 aa8.06□□□□□ -1.12
AC055855.1-201ENST00000489563 ARHGEF1Q92888 912 aaKnown RBP8.05□□□□□ -1.12
AC055855.1-201ENST00000489563 TMEM121BQ9BXQ6 578 aaPredicted RBP8.05□□□□□ -1.12
AC055855.1-201ENST00000489563 PPP1R15BQ5SWA1 713 aa8.04□□□□□ -1.12
AC055855.1-201ENST00000489563 POTEFA5A3E0 1075 aa8.02□□□□□ -1.13
AC055855.1-201ENST00000489563 PRKCSHP14314 528 aaPredicted RBP8.02□□□□□ -1.13
AC055855.1-201ENST00000489563 TPRNQ4KMQ1 711 aa8.02□□□□□ -1.13
AC055855.1-201ENST00000489563 DSG2Q14126 1118 aa8.01□□□□□ -1.13
AC055855.1-201ENST00000489563 C2orf72A6NCS6 295 aa8□□□□□ -1.13
AC055855.1-201ENST00000489563 FOXK1P85037 733 aa8□□□□□ -1.13
AC055855.1-201ENST00000489563 CAMK2BQ13554 666 aa8□□□□□ -1.13
AC055855.1-201ENST00000489563 C3orf67Q6ZVT6 689 aa7.98□□□□□ -1.13
AC055855.1-201ENST00000489563 PLPP6Q8IY26 295 aa7.98□□□□□ -1.13
AC055855.1-201ENST00000489563 TULP1O00294 542 aaPredicted RBP7.97□□□□□ -1.13
AC055855.1-201ENST00000489563 KIF3CO14782 793 aa7.96□□□□□ -1.14
AC055855.1-201ENST00000489563 SEMA3EO15041 775 aa7.96□□□□□ -1.14
AC055855.1-201ENST00000489563 ARIH1Q9Y4X5 557 aaPredicted RBP7.96□□□□□ -1.14
AC055855.1-201ENST00000489563 TMEM92Q6UXU6 159 aa7.95□□□□□ -1.14
AC055855.1-201ENST00000489563 DPYSL4O14531 572 aa7.93□□□□□ -1.14
AC055855.1-201ENST00000489563 EMILIN3Q9NT22 766 aa7.93□□□□□ -1.14
AC055855.1-201ENST00000489563 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.92□□□□□ -1.14
AC055855.1-201ENST00000489563 TESPA1A2RU30 521 aaPredicted RBP7.91□□□□□ -1.14
AC055855.1-201ENST00000489563 MAP3K9P80192 1104 aa7.91□□□□□ -1.14
AC055855.1-201ENST00000489563 SMYD5Q6GMV2 418 aa7.91□□□□□ -1.14
AC055855.1-201ENST00000489563 LMOD2Q6P5Q4 547 aa7.91□□□□□ -1.14
AC055855.1-201ENST00000489563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.91□□□□□ -1.14
AC055855.1-201ENST00000489563 UPF1Q92900 1129 aaKnown RBP eCLIP7.9□□□□□ -1.14
AC055855.1-201ENST00000489563 SPDYE16A6NNV3 312 aaPredicted RBP7.89□□□□□ -1.15
AC055855.1-201ENST00000489563 TBC1D12O60347 775 aa7.86□□□□□ -1.15
AC055855.1-201ENST00000489563 PDIA6Q15084 440 aa7.86□□□□□ -1.15
AC055855.1-201ENST00000489563 OXER1Q8TDS5 423 aa7.85□□□□□ -1.15
AC055855.1-201ENST00000489563 MLLT3P42568 568 aaPredicted RBP7.84□□□□□ -1.15
AC055855.1-201ENST00000489563 POTEB2H3BUK9 544 aa7.82□□□□□ -1.16
AC055855.1-201ENST00000489563 POTEJP0CG39 1038 aa7.82□□□□□ -1.16
AC055855.1-201ENST00000489563 GRXCR2A6NFK2 248 aa7.81□□□□□ -1.16
AC055855.1-201ENST00000489563 SLC34A2O95436 690 aa7.81□□□□□ -1.16
AC055855.1-201ENST00000489563 MAMSTRQ6ZN01 415 aa7.81□□□□□ -1.16
AC055855.1-201ENST00000489563 PTCD2Q8WV60 388 aaKnown RBP7.81□□□□□ -1.16
AC055855.1-201ENST00000489563 SCUBE2Q9NQ36 999 aa7.81□□□□□ -1.16
AC055855.1-201ENST00000489563 ZNF316A6NFI3 1004 aaPredicted RBP7.8□□□□□ -1.16
AC055855.1-201ENST00000489563 EVI5O60447 810 aa7.8□□□□□ -1.16
AC055855.1-201ENST00000489563 SLAIN1Q8ND83 568 aa7.8□□□□□ -1.16
AC055855.1-201ENST00000489563 RBM26Q5T8P6 1007 aaKnown RBP7.79□□□□□ -1.16
AC055855.1-201ENST00000489563 ZC3H15Q8WU90 426 aaKnown RBP7.79□□□□□ -1.16
AC055855.1-201ENST00000489563 DDX12PQ92771 950 aa7.78□□□□□ -1.16
AC055855.1-201ENST00000489563 PTGER2P43116 358 aa7.76□□□□□ -1.17
AC055855.1-201ENST00000489563 GPIHBP1Q8IV16 184 aa7.76□□□□□ -1.17
AC055855.1-201ENST00000489563 PCDHGA4Q9Y5G9 962 aa7.76□□□□□ -1.17
AC055855.1-201ENST00000489563 DOK7Q18PE1 504 aa7.75□□□□□ -1.17
AC055855.1-201ENST00000489563 RIMBP2O15034 1052 aa7.74□□□□□ -1.17
AC055855.1-201ENST00000489563 ANO8Q9HCE9 1232 aaPredicted RBP7.74□□□□□ -1.17
AC055855.1-201ENST00000489563 NUTM2FA1L443 756 aa7.73□□□□□ -1.17
AC055855.1-201ENST00000489563 ZMYND10O75800 440 aa7.72□□□□□ -1.17
AC055855.1-201ENST00000489563 OSBPP22059 807 aa7.72□□□□□ -1.17
AC055855.1-201ENST00000489563 ZNF710Q8N1W2 664 aa7.72□□□□□ -1.17
AC055855.1-201ENST00000489563 HOXB3P14651 431 aaPredicted RBP7.7□□□□□ -1.18
AC055855.1-201ENST00000489563 ARSIQ5FYB1 569 aa7.7□□□□□ -1.18
AC055855.1-201ENST00000489563 KRI1Q8N9T8 703 aaKnown RBP7.7□□□□□ -1.18
AC055855.1-201ENST00000489563 SLC24A3Q9HC58 644 aa7.7□□□□□ -1.18
AC055855.1-201ENST00000489563 SNPHO15079 494 aa7.69□□□□□ -1.18
AC055855.1-201ENST00000489563 BARGINQ6ZT62 677 aa7.69□□□□□ -1.18
AC055855.1-201ENST00000489563 ZSWIM6Q9HCJ5 1215 aa7.69□□□□□ -1.18
AC055855.1-201ENST00000489563 PHF14O94880 888 aa7.68□□□□□ -1.18
AC055855.1-201ENST00000489563 NUDT7P0C024 238 aa7.68□□□□□ -1.18
AC055855.1-201ENST00000489563 KHSRPQ92945 711 aaKnown RBP eCLIP7.68□□□□□ -1.18
AC055855.1-201ENST00000489563 EPAS1Q99814 870 aa7.68□□□□□ -1.18
AC055855.1-201ENST00000489563 KDM4FA0A1W2PPD8 638 aa7.66□□□□□ -1.18
AC055855.1-201ENST00000489563 MAP3K7O43318 606 aa7.66□□□□□ -1.18
AC055855.1-201ENST00000489563 LHX8Q68G74 356 aa7.66□□□□□ -1.18
AC055855.1-201ENST00000489563 TYW1BQ6NUM6 668 aa7.66□□□□□ -1.18
AC055855.1-201ENST00000489563 GPR153Q6NV75 609 aa7.66□□□□□ -1.18
AC055855.1-201ENST00000489563 RBM33Q96EV2 1170 aaKnown RBP7.66□□□□□ -1.18
AC055855.1-201ENST00000489563 OTUD5Q96G74 571 aa7.66□□□□□ -1.18
AC055855.1-201ENST00000489563 PCDHGA10Q9Y5H3 936 aa7.66□□□□□ -1.18
AC055855.1-201ENST00000489563 FCHSD2O94868 740 aa7.65□□□□□ -1.18
AC055855.1-201ENST00000489563 PRIM1P49642 420 aaKnown RBP7.65□□□□□ -1.18
AC055855.1-201ENST00000489563 EN1Q05925 392 aaPredicted RBP7.64□□□□□ -1.19
AC055855.1-201ENST00000489563 ZNF454Q8N9F8 522 aa7.64□□□□□ -1.19
AC055855.1-201ENST00000489563 FBXW7Q969H0 707 aa7.64□□□□□ -1.19
AC055855.1-201ENST00000489563 JPH4Q96JJ6 628 aa7.64□□□□□ -1.19
AC055855.1-201ENST00000489563 GNPATO15228 680 aa7.63□□□□□ -1.19
AC055855.1-201ENST00000489563 GPR37O15354 613 aa7.63□□□□□ -1.19
AC055855.1-201ENST00000489563 FOSBP53539 338 aa7.63□□□□□ -1.19
AC055855.1-201ENST00000489563 HIC1Q14526 733 aa7.63□□□□□ -1.19
AC055855.1-201ENST00000489563 AK7Q96M32 723 aa7.63□□□□□ -1.19
AC055855.1-201ENST00000489563 ZDHHC16Q969W1 377 aa7.62□□□□□ -1.19
AC055855.1-201ENST00000489563 PLSCR2Q9NRY7 297 aa7.62□□□□□ -1.19
AC055855.1-201ENST00000489563 PTGDRQ13258 359 aa7.61□□□□□ -1.19
AC055855.1-201ENST00000489563 LHX6Q9UPM6 363 aa7.61□□□□□ -1.19
AC055855.1-201ENST00000489563 MINK1Q8N4C8 1332 aaPredicted RBP7.6□□□□□ -1.19
AC055855.1-201ENST00000489563 NEUROD2Q15784 382 aa7.6□□□□□ -1.19
AC055855.1-201ENST00000489563 TSR1Q2NL82 804 aaKnown RBP7.6□□□□□ -1.19
AC055855.1-201ENST00000489563 CDHR5Q9HBB8 845 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms