RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 PLCH2O75038 1416 aa24.53■■□□□ 1.52
CLDN11-208ENST00000488989 KIF13AQ9H1H9 1805 aa24.51■■□□□ 1.51
CLDN11-208ENST00000488989 MAP3K4Q9Y6R4 1608 aa24.51■■□□□ 1.51
CLDN11-208ENST00000488989 CFDP1Q9UEE9 299 aaPredicted RBP24.48■■□□□ 1.51
CLDN11-208ENST00000488989 ARHGAP5Q13017 1502 aa24.45■■□□□ 1.51
CLDN11-208ENST00000488989 CD109Q6YHK3 1445 aa24.45■■□□□ 1.51
CLDN11-208ENST00000488989 SAMD9LQ8IVG5 1584 aa24.44■■□□□ 1.5
CLDN11-208ENST00000488989 CAMSAP2Q08AD1 1489 aa24.44■■□□□ 1.5
CLDN11-208ENST00000488989 FAM69CQ0P6D2 419 aa24.41■■□□□ 1.5
CLDN11-208ENST00000488989 CFAP74Q9C0B2 1584 aa24.4■■□□□ 1.5
CLDN11-208ENST00000488989 EFCAB2Q5VUJ9 269 aa24.39■■□□□ 1.49
CLDN11-208ENST00000488989 PPRC1Q5VV67 1664 aaKnown RBP24.38■■□□□ 1.49
CLDN11-208ENST00000488989 FANCAO15360 1455 aa24.38■■□□□ 1.49
CLDN11-208ENST00000488989 PLEKHH2Q8IVE3 1493 aa24.38■■□□□ 1.49
CLDN11-208ENST00000488989 ZNF644Q9H582 1327 aaPredicted RBP24.37■■□□□ 1.49
CLDN11-208ENST00000488989 FAM50AQ14320 339 aaKnown RBP24.37■■□□□ 1.49
CLDN11-208ENST00000488989 KIAA1107Q9UPP5 1409 aa24.36■■□□□ 1.49
CLDN11-208ENST00000488989 DNMT1P26358 1616 aaKnown RBP24.36■■□□□ 1.49
CLDN11-208ENST00000488989 ABCC1P33527 1531 aa24.35■■□□□ 1.49
CLDN11-208ENST00000488989 ARHGEF5Q12774 1597 aa24.35■■□□□ 1.49
CLDN11-208ENST00000488989 NEO1Q92859 1461 aa24.34■■□□□ 1.49
CLDN11-208ENST00000488989 ZNF777Q9ULD5 760 aaPredicted RBP24.34■■□□□ 1.49
CLDN11-208ENST00000488989 MBD5Q9P267 1494 aa24.33■■□□□ 1.49
CLDN11-208ENST00000488989 TSPOAP1O95153 1857 aa24.33■■□□□ 1.49
CLDN11-208ENST00000488989 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
CLDN11-208ENST00000488989 CROCC2H7BZ55 1655 aa24.31■■□□□ 1.48
CLDN11-208ENST00000488989 SYCP2Q9BX26 1530 aa24.3■■□□□ 1.48
CLDN11-208ENST00000488989 AKNAQ7Z591 1439 aa24.3■■□□□ 1.48
CLDN11-208ENST00000488989 ARHGEF12Q9NZN5 1544 aa24.3■■□□□ 1.48
CLDN11-208ENST00000488989 ABCC5O15440 1437 aa24.29■■□□□ 1.48
CLDN11-208ENST00000488989 DAPK1P53355 1430 aa24.29■■□□□ 1.48
CLDN11-208ENST00000488989 TEX14Q8IWB6 1497 aa24.28■■□□□ 1.48
CLDN11-208ENST00000488989 RSPH4AQ5TD94 716 aa24.28■■□□□ 1.48
CLDN11-208ENST00000488989 PTPRKQ15262 1439 aa24.27■■□□□ 1.48
CLDN11-208ENST00000488989 ADGRL1O94910 1474 aa24.26■■□□□ 1.47
CLDN11-208ENST00000488989 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
CLDN11-208ENST00000488989 SHANK2Q9UPX8 1470 aa24.25■■□□□ 1.47
CLDN11-208ENST00000488989 HNRNPMP52272 730 aaKnown RBP eCLIP24.24■■□□□ 1.47
CLDN11-208ENST00000488989 MAST1Q9Y2H9 1570 aa24.22■■□□□ 1.47
CLDN11-208ENST00000488989 SCAPERQ9BY12 1400 aa24.22■■□□□ 1.47
CLDN11-208ENST00000488989 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
CLDN11-208ENST00000488989 TRAPPC8Q9Y2L5 1435 aa24.2■■□□□ 1.46
CLDN11-208ENST00000488989 ITGAEP38570 1179 aa24.19■■□□□ 1.46
CLDN11-208ENST00000488989 ADGRL2O95490 1459 aa24.19■■□□□ 1.46
CLDN11-208ENST00000488989 ROCK1Q13464 1354 aa24.17■■□□□ 1.46
CLDN11-208ENST00000488989 RICTORQ6R327 1708 aa24.16■■□□□ 1.46
CLDN11-208ENST00000488989 C9orf84Q5VXU9 1444 aa24.16■■□□□ 1.46
CLDN11-208ENST00000488989 POGZQ7Z3K3 1410 aa24.16■■□□□ 1.46
CLDN11-208ENST00000488989 KDM5CP41229 1560 aa24.16■■□□□ 1.46
CLDN11-208ENST00000488989 ZNF518AQ6AHZ1 1483 aa24.15■■□□□ 1.46
CLDN11-208ENST00000488989 DENND4BO75064 1496 aaPredicted RBP24.14■■□□□ 1.46
CLDN11-208ENST00000488989 TRHP20396 242 aaPredicted RBP24.14■■□□□ 1.45
CLDN11-208ENST00000488989 TSPY4P0CV99 314 aa24.13■■□□□ 1.45
CLDN11-208ENST00000488989 TSPY10P0CW01 314 aa24.13■■□□□ 1.45
CLDN11-208ENST00000488989 GCC2Q8IWJ2 1684 aa24.12■■□□□ 1.45
CLDN11-208ENST00000488989 RTEL1-TNFRSF6BF6WH68 1400 aa24.12■■□□□ 1.45
CLDN11-208ENST00000488989 INO80Q9ULG1 1556 aaPredicted RBP24.12■■□□□ 1.45
CLDN11-208ENST00000488989 HFM1A2PYH4 1435 aa24.11■■□□□ 1.45
CLDN11-208ENST00000488989 PLXNC1O60486 1568 aa24.11■■□□□ 1.45
CLDN11-208ENST00000488989 NCOA1Q15788 1441 aa24.1■■□□□ 1.45
CLDN11-208ENST00000488989 FRMPD1Q5SYB0 1578 aa24.1■■□□□ 1.45
CLDN11-208ENST00000488989 ZFYVE16Q7Z3T8 1539 aa24.1■■□□□ 1.45
CLDN11-208ENST00000488989 AFAP1Q8N556 730 aa24.09■■□□□ 1.45
CLDN11-208ENST00000488989 CHIC2Q9UKJ5 165 aa24.09■■□□□ 1.45
CLDN11-208ENST00000488989 ANKRD30AQ9BXX3 1397 aa24.08■■□□□ 1.45
CLDN11-208ENST00000488989 NAIPQ13075 1403 aa24.08■■□□□ 1.44
CLDN11-208ENST00000488989 KIDINS220Q9ULH0 1771 aa24.07■■□□□ 1.44
CLDN11-208ENST00000488989 MLH3Q9UHC1 1453 aa24.07■■□□□ 1.44
CLDN11-208ENST00000488989 ATP7AQ04656 1500 aa24.06■■□□□ 1.44
CLDN11-208ENST00000488989 ZMYM4Q5VZL5 1548 aa24.06■■□□□ 1.44
CLDN11-208ENST00000488989 SPAG9O60271 1321 aaKnown RBP24.06■■□□□ 1.44
CLDN11-208ENST00000488989 HECW2Q9P2P5 1572 aa24.05■■□□□ 1.44
CLDN11-208ENST00000488989 SETD5Q9C0A6 1442 aa24.05■■□□□ 1.44
CLDN11-208ENST00000488989 COL17A1Q9UMD9 1497 aaPredicted RBP24.04■■□□□ 1.44
CLDN11-208ENST00000488989 RAPGEF3O95398 923 aa24.01■■□□□ 1.43
CLDN11-208ENST00000488989 RRP7BPQ9NSQ0 103 aa24.01■■□□□ 1.43
CLDN11-208ENST00000488989 HRCP23327 699 aa24■■□□□ 1.43
CLDN11-208ENST00000488989 KIF15Q9NS87 1388 aa23.99■■□□□ 1.43
CLDN11-208ENST00000488989 MAGI2Q86UL8 1455 aa23.99■■□□□ 1.43
CLDN11-208ENST00000488989 RAB3GAP2Q9H2M9 1393 aa23.98■■□□□ 1.43
CLDN11-208ENST00000488989 DUOX2Q9NRD8 1548 aa23.97■■□□□ 1.43
CLDN11-208ENST00000488989 KDM6BO15054 1643 aa23.95■■□□□ 1.43
CLDN11-208ENST00000488989 ABCA6Q8N139 1617 aa23.95■■□□□ 1.43
CLDN11-208ENST00000488989 ANKRD50Q9ULJ7 1429 aa23.93■■□□□ 1.42
CLDN11-208ENST00000488989 DIP2CQ9Y2E4 1556 aa23.93■■□□□ 1.42
CLDN11-208ENST00000488989 ERBINQ96RT1 1412 aa23.91■■□□□ 1.42
CLDN11-208ENST00000488989 ACIN1Q9UKV3 1341 aaKnown RBP23.89■■□□□ 1.42
CLDN11-208ENST00000488989 EIF2AK4Q9P2K8 1649 aaKnown RBP23.88■■□□□ 1.41
CLDN11-208ENST00000488989 YEATS2Q9ULM3 1422 aa23.88■■□□□ 1.41
CLDN11-208ENST00000488989 DHX29Q7Z478 1369 aaKnown RBP23.88■■□□□ 1.41
CLDN11-208ENST00000488989 REREQ9P2R6 1566 aa23.87■■□□□ 1.41
CLDN11-208ENST00000488989 ARHGEF40Q8TER5 1519 aa23.87■■□□□ 1.41
CLDN11-208ENST00000488989 BCORL1Q5H9F3 1711 aa23.87■■□□□ 1.41
CLDN11-208ENST00000488989 A2MP01023 1474 aa23.87■■□□□ 1.41
CLDN11-208ENST00000488989 MYT1LQ9UL68 1186 aa23.86■■□□□ 1.41
CLDN11-208ENST00000488989 UNC13BO14795 1591 aa23.82■■□□□ 1.4
CLDN11-208ENST00000488989 ATP10AO60312 1499 aa23.82■■□□□ 1.4
CLDN11-208ENST00000488989 DEPDC5O75140 1603 aa23.81■■□□□ 1.4
CLDN11-208ENST00000488989 KDM5DQ9BY66 1539 aa23.79■■□□□ 1.4
CLDN11-208ENST00000488989 RNF17Q9BXT8 1623 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms