RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PTGER2P43116 358 aa9.89□□□□□ -0.83
CD46-215ENST00000488596 VARS2Q5ST30 1063 aaKnown RBP9.88□□□□□ -0.83
CD46-215ENST00000488596 MICALL2Q8IY33 904 aa9.87□□□□□ -0.83
CD46-215ENST00000488596 ZNF687Q8N1G0 1237 aa9.87□□□□□ -0.83
CD46-215ENST00000488596 BCL11BQ9C0K0 894 aaPredicted RBP9.86□□□□□ -0.83
CD46-215ENST00000488596 ECM2O94769 699 aaPredicted RBP9.85□□□□□ -0.83
CD46-215ENST00000488596 TMEM92Q6UXU6 159 aa9.85□□□□□ -0.83
CD46-215ENST00000488596 PKD2Q13563 968 aa9.84□□□□□ -0.83
CD46-215ENST00000488596 STK24Q9Y6E0 443 aa9.83□□□□□ -0.84
CD46-215ENST00000488596 RGL2O15211 777 aa9.81□□□□□ -0.84
CD46-215ENST00000488596 FBXO22Q8NEZ5 403 aa9.81□□□□□ -0.84
CD46-215ENST00000488596 TAOK2Q9UL54 1235 aa9.81□□□□□ -0.84
CD46-215ENST00000488596 STK25O00506 426 aa9.79□□□□□ -0.84
CD46-215ENST00000488596 NLRP6P59044 892 aa9.79□□□□□ -0.84
CD46-215ENST00000488596 GPR153Q6NV75 609 aa9.79□□□□□ -0.84
CD46-215ENST00000488596 MFRPQ9BY79 579 aa9.79□□□□□ -0.84
CD46-215ENST00000488596 ANKRD13DQ6ZTN6 518 aa9.69□□□□□ -0.86
CD46-215ENST00000488596 ZNF316A6NFI3 1004 aaPredicted RBP9.67□□□□□ -0.86
CD46-215ENST00000488596 LSM11P83369 360 aaKnown RBP eCLIP9.67□□□□□ -0.86
CD46-215ENST00000488596 ARSIQ5FYB1 569 aa9.67□□□□□ -0.86
CD46-215ENST00000488596 KIF3CO14782 793 aa9.65□□□□□ -0.86
CD46-215ENST00000488596 C2orf72A6NCS6 295 aa9.64□□□□□ -0.87
CD46-215ENST00000488596 PPP1R37O75864 691 aa9.64□□□□□ -0.87
CD46-215ENST00000488596 PBX2P40425 430 aa9.64□□□□□ -0.87
CD46-215ENST00000488596 KHSRPQ92945 711 aaKnown RBP eCLIP9.62□□□□□ -0.872e-8■■■□□ 16.6
CD46-215ENST00000488596 PLA2G2EQ9NZK7 142 aa9.58□□□□□ -0.88
CD46-215ENST00000488596 HCSTQ9UBK5 93 aa9.58□□□□□ -0.88
CD46-215ENST00000488596 HS6ST3Q8IZP7 471 aa9.56□□□□□ -0.88
CD46-215ENST00000488596 TMC2Q8TDI7 906 aa9.54□□□□□ -0.88
CD46-215ENST00000488596 CHGAP10645 457 aaKnown RBP9.53□□□□□ -0.88
CD46-215ENST00000488596 NUDT7P0C024 238 aa9.52□□□□□ -0.89
CD46-215ENST00000488596 SLC34A2O95436 690 aa9.51□□□□□ -0.89
CD46-215ENST00000488596 PCDHGA4Q9Y5G9 962 aa9.51□□□□□ -0.89
CD46-215ENST00000488596 NKX1-1Q15270 411 aaPredicted RBP9.49□□□□□ -0.89
CD46-215ENST00000488596 POTEEQ6S8J3 1075 aa9.48□□□□□ -0.89
CD46-215ENST00000488596 LHX6Q9UPM6 363 aa9.48□□□□□ -0.89
CD46-215ENST00000488596 PSDA5PKW4 1024 aaPredicted RBP9.47□□□□□ -0.89
CD46-215ENST00000488596 ADGRD1Q6QNK2 874 aa9.46□□□□□ -0.9
CD46-215ENST00000488596 AXIN2Q9Y2T1 843 aa9.46□□□□□ -0.9
CD46-215ENST00000488596 ARHGAP33O14559 1287 aa9.45□□□□□ -0.9
CD46-215ENST00000488596 DNAJC5Q9H3Z4 198 aa9.45□□□□□ -0.9
CD46-215ENST00000488596 FOXK1P85037 733 aa9.44□□□□□ -0.9
CD46-215ENST00000488596 GPHNQ9NQX3 736 aaPredicted RBP9.44□□□□□ -0.9
CD46-215ENST00000488596 TK2O00142 265 aa9.43□□□□□ -0.9
CD46-215ENST00000488596 PLPP6Q8IY26 295 aa9.43□□□□□ -0.9
CD46-215ENST00000488596 DSG2Q14126 1118 aa9.42□□□□□ -0.9
CD46-215ENST00000488596 PTCD2Q8WV60 388 aaKnown RBP9.42□□□□□ -0.9
CD46-215ENST00000488596 KDM4FA0A1W2PPD8 638 aa9.41□□□□□ -0.9
CD46-215ENST00000488596 HRO43593 1189 aa9.37□□□□□ -0.91
CD46-215ENST00000488596 RGS20O76081 388 aa9.37□□□□□ -0.91
CD46-215ENST00000488596 RYDENQ9NUL5 291 aaKnown RBP9.34□□□□□ -0.91
CD46-215ENST00000488596 GTPBP6O43824 516 aaPredicted RBP9.33□□□□□ -0.92
CD46-215ENST00000488596 CRISPLD2Q9H0B8 497 aa9.33□□□□□ -0.92
CD46-215ENST00000488596 TBC1D12O60347 775 aa9.31□□□□□ -0.92
CD46-215ENST00000488596 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
CD46-215ENST00000488596 STAC3Q96MF2 364 aa9.31□□□□□ -0.92
CD46-215ENST00000488596 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
CD46-215ENST00000488596 DMRTA1Q5VZB9 504 aa9.3□□□□□ -0.92
CD46-215ENST00000488596 OXER1Q8TDS5 423 aa9.3□□□□□ -0.92
CD46-215ENST00000488596 KCTD12Q96CX2 325 aaKnown RBP9.3□□□□□ -0.92
CD46-215ENST00000488596 PSEN2P49810 448 aa9.29□□□□□ -0.92
CD46-215ENST00000488596 PPP1R15BQ5SWA1 713 aa9.29□□□□□ -0.92
CD46-215ENST00000488596 UPF1Q92900 1129 aaKnown RBP eCLIP9.29□□□□□ -0.927e-13■■□□□ 13.4
CD46-215ENST00000488596 PPP4R3BQ5MIZ7 849 aa9.28□□□□□ -0.92
CD46-215ENST00000488596 PDE4AP27815 886 aa9.27□□□□□ -0.93
CD46-215ENST00000488596 KCNH8Q96L42 1107 aa9.27□□□□□ -0.93
CD46-215ENST00000488596 DCAF8L2P0C7V8 631 aa9.26□□□□□ -0.93
CD46-215ENST00000488596 IRX2Q9BZI1 471 aaPredicted RBP9.25□□□□□ -0.93
CD46-215ENST00000488596 LARP6Q9BRS8 491 aaKnown RBP9.23□□□□□ -0.93
CD46-215ENST00000488596 ZNF454Q8N9F8 522 aa9.21□□□□□ -0.94
CD46-215ENST00000488596 KCNK17Q96T54 332 aa9.21□□□□□ -0.94
CD46-215ENST00000488596 VPS9D1Q9Y2B5 631 aa9.2□□□□□ -0.94
CD46-215ENST00000488596 PTPN5P54829 565 aa9.19□□□□□ -0.94
CD46-215ENST00000488596 CADPS2Q86UW7 1296 aa9.19□□□□□ -0.94
CD46-215ENST00000488596 DDX27Q96GQ7 796 aaKnown RBP9.19□□□□□ -0.94
CD46-215ENST00000488596 SLC4A5Q9BY07 1137 aa9.19□□□□□ -0.94
CD46-215ENST00000488596 A0A0G2JS52 829 aa9.18□□□□□ -0.94
CD46-215ENST00000488596 MFSD10Q14728 455 aa9.18□□□□□ -0.94
CD46-215ENST00000488596 ANO8Q9HCE9 1232 aaPredicted RBP9.18□□□□□ -0.94
CD46-215ENST00000488596 FOSBP53539 338 aa9.17□□□□□ -0.94
CD46-215ENST00000488596 EVI5O60447 810 aa9.16□□□□□ -0.94
CD46-215ENST00000488596 BCL2L12Q9HB09 334 aa9.16□□□□□ -0.94
CD46-215ENST00000488596 EMILIN3Q9NT22 766 aa9.16□□□□□ -0.94
CD46-215ENST00000488596 THSD4Q6ZMP0 1018 aa9.15□□□□□ -0.94
CD46-215ENST00000488596 MAP3K9P80192 1104 aa9.13□□□□□ -0.95
CD46-215ENST00000488596 BHMG1C9JSJ3 638 aaPredicted RBP9.12□□□□□ -0.95
CD46-215ENST00000488596 JPH4Q96JJ6 628 aa9.12□□□□□ -0.95
CD46-215ENST00000488596 PTPREP23469 700 aa9.11□□□□□ -0.95
CD46-215ENST00000488596 ADAM33Q9BZ11 813 aa9.11□□□□□ -0.95
CD46-215ENST00000488596 ZDHHC16Q969W1 377 aa9.1□□□□□ -0.95
CD46-215ENST00000488596 GOLGA8CPA6NN73 597 aa9.09□□□□□ -0.95
CD46-215ENST00000488596 ZBED2Q9BTP6 218 aa9.09□□□□□ -0.95
CD46-215ENST00000488596 WNT2BQ93097 391 aa9.08□□□□□ -0.96
CD46-215ENST00000488596 MRPL50Q8N5N7 158 aaKnown RBP9.07□□□□□ -0.96
CD46-215ENST00000488596 PCDHGA10Q9Y5H3 936 aa9.07□□□□□ -0.96
CD46-215ENST00000488596 BBXQ8WY36 941 aaPredicted RBP9.05□□□□□ -0.96
CD46-215ENST00000488596 NBPF3Q9H094 633 aa9.05□□□□□ -0.96
CD46-215ENST00000488596 CAMK2BQ13554 666 aa9.04□□□□□ -0.96
CD46-215ENST00000488596 ITGBL1O95965 494 aaPredicted RBP9.02□□□□□ -0.97
CD46-215ENST00000488596 DPYSL4O14531 572 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms