RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 RAPGEF3O95398 923 aa18.45■□□□□ 0.54
RAB11FIP3-210ENST00000487899 PLCH2O75038 1416 aa18.45■□□□□ 0.54
RAB11FIP3-210ENST00000487899 ZFYVE16Q7Z3T8 1539 aa18.44■□□□□ 0.54
RAB11FIP3-210ENST00000487899 CLIP1P30622 1438 aa18.44■□□□□ 0.54
RAB11FIP3-210ENST00000487899 POGZQ7Z3K3 1410 aa18.44■□□□□ 0.54
RAB11FIP3-210ENST00000487899 ITSN2Q9NZM3 1697 aa18.44■□□□□ 0.54
RAB11FIP3-210ENST00000487899 KDM5CP41229 1560 aa18.42■□□□□ 0.54
RAB11FIP3-210ENST00000487899 ARHGAP5Q13017 1502 aa18.41■□□□□ 0.54
RAB11FIP3-210ENST00000487899 RIMS1Q86UR5 1692 aaKnown RBP18.41■□□□□ 0.54
RAB11FIP3-210ENST00000487899 ABCC1P33527 1531 aa18.39■□□□□ 0.54
RAB11FIP3-210ENST00000487899 YEATS2Q9ULM3 1422 aa18.39■□□□□ 0.53
RAB11FIP3-210ENST00000487899 FER1L4A9Z1Z3 1794 aa18.38■□□□□ 0.53
RAB11FIP3-210ENST00000487899 ILDR1Q86SU0 546 aaPredicted RBP18.38■□□□□ 0.53
RAB11FIP3-210ENST00000487899 MAGI2Q86UL8 1455 aa18.38■□□□□ 0.53
RAB11FIP3-210ENST00000487899 ATP1B4Q9UN42 357 aaPredicted RBP18.37■□□□□ 0.53
RAB11FIP3-210ENST00000487899 ABCA6Q8N139 1617 aa18.35■□□□□ 0.53
RAB11FIP3-210ENST00000487899 PTPRMP28827 1452 aa18.35■□□□□ 0.53
RAB11FIP3-210ENST00000487899 SCAPERQ9BY12 1400 aa18.35■□□□□ 0.53
RAB11FIP3-210ENST00000487899 DIP2CQ9Y2E4 1556 aa18.34■□□□□ 0.53
RAB11FIP3-210ENST00000487899 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.53
RAB11FIP3-210ENST00000487899 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.52
RAB11FIP3-210ENST00000487899 SAMD9LQ8IVG5 1584 aa18.33■□□□□ 0.52
RAB11FIP3-210ENST00000487899 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
RAB11FIP3-210ENST00000487899 REREQ9P2R6 1566 aa18.3■□□□□ 0.52
RAB11FIP3-210ENST00000487899 KIDINS220Q9ULH0 1771 aa18.3■□□□□ 0.52
RAB11FIP3-210ENST00000487899 ARHGEF12Q9NZN5 1544 aa18.29■□□□□ 0.52
RAB11FIP3-210ENST00000487899 EHBP1L1Q8N3D4 1523 aa18.28■□□□□ 0.52
RAB11FIP3-210ENST00000487899 TIAM1Q13009 1591 aa18.27■□□□□ 0.52
RAB11FIP3-210ENST00000487899 C9orf84Q5VXU9 1444 aa18.27■□□□□ 0.52
RAB11FIP3-210ENST00000487899 SYCP2Q9BX26 1530 aa18.26■□□□□ 0.51
RAB11FIP3-210ENST00000487899 EFCAB2Q5VUJ9 269 aa18.25■□□□□ 0.51
RAB11FIP3-210ENST00000487899 ATP10AO60312 1499 aa18.24■□□□□ 0.51
RAB11FIP3-210ENST00000487899 INO80Q9ULG1 1556 aaPredicted RBP18.24■□□□□ 0.51
RAB11FIP3-210ENST00000487899 GPATCH8Q9UKJ3 1502 aaKnown RBP18.23■□□□□ 0.51
RAB11FIP3-210ENST00000487899 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
RAB11FIP3-210ENST00000487899 MLH3Q9UHC1 1453 aa18.22■□□□□ 0.51
RAB11FIP3-210ENST00000487899 LMTK3Q96Q04 1460 aa18.21■□□□□ 0.51
RAB11FIP3-210ENST00000487899 ARID4BQ4LE39 1312 aaPredicted RBP18.2■□□□□ 0.5
RAB11FIP3-210ENST00000487899 SUPT6HQ7KZ85 1726 aaKnown RBP18.19■□□□□ 0.5
RAB11FIP3-210ENST00000487899 PREX1Q8TCU6 1659 aa18.18■□□□□ 0.5
RAB11FIP3-210ENST00000487899 AGLP35573 1532 aa18.17■□□□□ 0.5
RAB11FIP3-210ENST00000487899 C3P01024 1663 aa18.16■□□□□ 0.5
RAB11FIP3-210ENST00000487899 ATP7AQ04656 1500 aa18.16■□□□□ 0.5
RAB11FIP3-210ENST00000487899 PLXNC1O60486 1568 aa18.16■□□□□ 0.5
RAB11FIP3-210ENST00000487899 AFAP1Q8N556 730 aa18.15■□□□□ 0.5
RAB11FIP3-210ENST00000487899 MTUS2Q5JR59 1369 aa18.15■□□□□ 0.5
RAB11FIP3-210ENST00000487899 ADGBQ8N7X0 1667 aa18.13■□□□□ 0.49
RAB11FIP3-210ENST00000487899 VPS8Q8N3P4 1428 aa18.12■□□□□ 0.49
RAB11FIP3-210ENST00000487899 MROH2AA6NES4 1674 aa18.12■□□□□ 0.49
RAB11FIP3-210ENST00000487899 PLEKHH2Q8IVE3 1493 aa18.11■□□□□ 0.49
RAB11FIP3-210ENST00000487899 KIAA1107Q9UPP5 1409 aa18.1■□□□□ 0.49
RAB11FIP3-210ENST00000487899 CCNB3Q8WWL7 1395 aa18.1■□□□□ 0.49
RAB11FIP3-210ENST00000487899 NCOA2Q15596 1464 aa18.08■□□□□ 0.49
RAB11FIP3-210ENST00000487899 MBD5Q9P267 1494 aa18.06■□□□□ 0.48
RAB11FIP3-210ENST00000487899 MLECQ14165 292 aa18.05■□□□□ 0.48
RAB11FIP3-210ENST00000487899 CAMSAP2Q08AD1 1489 aa18.05■□□□□ 0.48
RAB11FIP3-210ENST00000487899 CLTCQ00610 1675 aaKnown RBP18.05■□□□□ 0.48
RAB11FIP3-210ENST00000487899 MAP3K1Q13233 1512 aa18.03■□□□□ 0.48
RAB11FIP3-210ENST00000487899 LRRC9Q6ZRR7 1453 aa18.03■□□□□ 0.48
RAB11FIP3-210ENST00000487899 LOC105371045A0A1W2PR82 267 aa18.02■□□□□ 0.48
RAB11FIP3-210ENST00000487899 ARHGEF5Q12774 1597 aa18.02■□□□□ 0.48
RAB11FIP3-210ENST00000487899 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
RAB11FIP3-210ENST00000487899 SETD1BQ9UPS6 1966 aaKnown RBP18.02■□□□□ 0.47
RAB11FIP3-210ENST00000487899 STRCQ7RTU9 1775 aa18.02■□□□□ 0.47
RAB11FIP3-210ENST00000487899 CFDP1Q9UEE9 299 aaPredicted RBP18.01■□□□□ 0.47
RAB11FIP3-210ENST00000487899 A2MP01023 1474 aa18■□□□□ 0.47
RAB11FIP3-210ENST00000487899 CCDC141Q6ZP82 1450 aa17.99■□□□□ 0.47
RAB11FIP3-210ENST00000487899 SPAG9O60271 1321 aaKnown RBP17.98■□□□□ 0.47
RAB11FIP3-210ENST00000487899 HNRNPMP52272 730 aaKnown RBP eCLIP17.98■□□□□ 0.47
RAB11FIP3-210ENST00000487899 CROCC2H7BZ55 1655 aa17.98■□□□□ 0.47
RAB11FIP3-210ENST00000487899 ZNF142P52746 1687 aaPredicted RBP17.98■□□□□ 0.47
RAB11FIP3-210ENST00000487899 ZNF644Q9H582 1327 aaPredicted RBP17.98■□□□□ 0.47
RAB11FIP3-210ENST00000487899 FBXO41Q8TF61 875 aa17.97■□□□□ 0.47
RAB11FIP3-210ENST00000487899 MYT1LQ9UL68 1186 aa17.97■□□□□ 0.47
RAB11FIP3-210ENST00000487899 MYO3AQ8NEV4 1616 aa17.97■□□□□ 0.47
RAB11FIP3-210ENST00000487899 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
RAB11FIP3-210ENST00000487899 CNTLNQ9NXG0 1405 aa17.96■□□□□ 0.47
RAB11FIP3-210ENST00000487899 MAST1Q9Y2H9 1570 aa17.95■□□□□ 0.46
RAB11FIP3-210ENST00000487899 RTEL1-TNFRSF6BF6WH68 1400 aa17.94■□□□□ 0.46
RAB11FIP3-210ENST00000487899 HSPA2P54652 639 aa17.93■□□□□ 0.46
RAB11FIP3-210ENST00000487899 CEBPAP49715 358 aaPredicted RBP17.92■□□□□ 0.46
RAB11FIP3-210ENST00000487899 UHRF1BP1Q6BDS2 1440 aa17.91■□□□□ 0.46
RAB11FIP3-210ENST00000487899 RNF17Q9BXT8 1623 aaKnown RBP17.9■□□□□ 0.46
RAB11FIP3-210ENST00000487899 EIF2AK4Q9P2K8 1649 aaKnown RBP17.89■□□□□ 0.45
RAB11FIP3-210ENST00000487899 MYOM3Q5VTT5 1437 aa17.89■□□□□ 0.45
RAB11FIP3-210ENST00000487899 FAM135AQ9P2D6 1515 aa17.88■□□□□ 0.45
RAB11FIP3-210ENST00000487899 NPATQ14207 1427 aa17.88■□□□□ 0.45
RAB11FIP3-210ENST00000487899 PTPN23Q9H3S7 1636 aa17.87■□□□□ 0.45
RAB11FIP3-210ENST00000487899 ZC3H13Q5T200 1668 aaKnown RBP17.87■□□□□ 0.45
RAB11FIP3-210ENST00000487899 KANK4Q5T7N3 995 aaPredicted RBP17.86■□□□□ 0.45
RAB11FIP3-210ENST00000487899 KDM5DQ9BY66 1539 aa17.86■□□□□ 0.45
RAB11FIP3-210ENST00000487899 CEP170BQ9Y4F5 1589 aaPredicted RBP17.86■□□□□ 0.45
RAB11FIP3-210ENST00000487899 MROH1Q8NDA8 1641 aa17.86■□□□□ 0.45
RAB11FIP3-210ENST00000487899 MIA2Q96PC5 1412 aa17.84■□□□□ 0.45
RAB11FIP3-210ENST00000487899 DNMT1P26358 1616 aaKnown RBP17.83■□□□□ 0.45
RAB11FIP3-210ENST00000487899 CEP152O94986 1710 aa17.83■□□□□ 0.44
RAB11FIP3-210ENST00000487899 PTPRKQ15262 1439 aa17.82■□□□□ 0.44
RAB11FIP3-210ENST00000487899 DHX29Q7Z478 1369 aaKnown RBP17.82■□□□□ 0.44
RAB11FIP3-210ENST00000487899 CAMSAP1Q5T5Y3 1602 aa17.81■□□□□ 0.44
RAB11FIP3-210ENST00000487899 SHANK2Q9UPX8 1470 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms