RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 PREX2Q70Z35 1606 aa36.48■■■■□ 3.43
SRM-205ENST00000487300 POGZQ7Z3K3 1410 aa36.46■■■■□ 3.43
SRM-205ENST00000487300 MAGI2Q86UL8 1455 aa36.43■■■■□ 3.42
SRM-205ENST00000487300 CDC42BPAQ5VT25 1732 aa36.42■■■■□ 3.42
SRM-205ENST00000487300 SIGLEC1Q9BZZ2 1709 aa36.42■■■■□ 3.42
SRM-205ENST00000487300 ZFYVE16Q7Z3T8 1539 aa36.42■■■■□ 3.42
SRM-205ENST00000487300 SCAPERQ9BY12 1400 aa36.41■■■■□ 3.42
SRM-205ENST00000487300 ARHGAP5Q13017 1502 aa36.4■■■■□ 3.42
SRM-205ENST00000487300 KDM5CP41229 1560 aa36.36■■■■□ 3.41
SRM-205ENST00000487300 EFCAB2Q5VUJ9 269 aa36.35■■■■□ 3.41
SRM-205ENST00000487300 YEATS2Q9ULM3 1422 aa36.34■■■■□ 3.41
SRM-205ENST00000487300 MADDQ8WXG6 1647 aa36.34■■■■□ 3.41
SRM-205ENST00000487300 CEP162Q5TB80 1403 aa36.31■■■■□ 3.4
SRM-205ENST00000487300 HECW2Q9P2P5 1572 aa36.31■■■■□ 3.4
SRM-205ENST00000487300 ZNF518AQ6AHZ1 1483 aa36.3■■■■□ 3.4
SRM-205ENST00000487300 ITSN2Q9NZM3 1697 aa36.29■■■■□ 3.4
SRM-205ENST00000487300 ABCC1P33527 1531 aa36.29■■■■□ 3.4
SRM-205ENST00000487300 PTPRMP28827 1452 aa36.26■■■■□ 3.4
SRM-205ENST00000487300 RIMS1Q86UR5 1692 aaKnown RBP36.21■■■■□ 3.39
SRM-205ENST00000487300 ARHGEF12Q9NZN5 1544 aa36.18■■■■□ 3.38
SRM-205ENST00000487300 SAMD9LQ8IVG5 1584 aa36.16■■■■□ 3.38
SRM-205ENST00000487300 DIP2CQ9Y2E4 1556 aa36.16■■■■□ 3.38
SRM-205ENST00000487300 ATP10AO60312 1499 aa36.16■■■■□ 3.38
SRM-205ENST00000487300 REREQ9P2R6 1566 aa36.15■■■■□ 3.38
SRM-205ENST00000487300 C9orf84Q5VXU9 1444 aa36.15■■■■□ 3.38
SRM-205ENST00000487300 ABCA6Q8N139 1617 aa36.15■■■■□ 3.38
SRM-205ENST00000487300 FER1L4A9Z1Z3 1794 aa36.15■■■■□ 3.38
SRM-205ENST00000487300 GPATCH8Q9UKJ3 1502 aaKnown RBP36.14■■■■□ 3.38
SRM-205ENST00000487300 ARID4BQ4LE39 1312 aaPredicted RBP36.14■■■■□ 3.38
SRM-205ENST00000487300 EHBP1L1Q8N3D4 1523 aa36.13■■■■□ 3.37
SRM-205ENST00000487300 MLH3Q9UHC1 1453 aa36.12■■■■□ 3.37
SRM-205ENST00000487300 KIDINS220Q9ULH0 1771 aa36.1■■■■□ 3.37
SRM-205ENST00000487300 TRAPPC8Q9Y2L5 1435 aa36.08■■■■□ 3.37
SRM-205ENST00000487300 AFAP1Q8N556 730 aa36.07■■■■□ 3.36
SRM-205ENST00000487300 TIAM1Q13009 1591 aa36.06■■■■□ 3.36
SRM-205ENST00000487300 MTUS2Q5JR59 1369 aa36.04■■■■□ 3.36
SRM-205ENST00000487300 SYCP2Q9BX26 1530 aa36.03■■■■□ 3.36
SRM-205ENST00000487300 KIAA1107Q9UPP5 1409 aa35.96■■■■□ 3.35
SRM-205ENST00000487300 AGLP35573 1532 aa35.96■■■■□ 3.35
SRM-205ENST00000487300 PLEKHH2Q8IVE3 1493 aa35.95■■■■□ 3.35
SRM-205ENST00000487300 CCNB3Q8WWL7 1395 aa35.95■■■■□ 3.35
SRM-205ENST00000487300 SUPT6HQ7KZ85 1726 aaKnown RBP35.94■■■■□ 3.34
SRM-205ENST00000487300 INO80Q9ULG1 1556 aaPredicted RBP35.94■■■■□ 3.34
SRM-205ENST00000487300 VPS8Q8N3P4 1428 aa35.94■■■■□ 3.34
SRM-205ENST00000487300 LOC105371045A0A1W2PR82 267 aa35.92■■■■□ 3.34
SRM-205ENST00000487300 LMTK3Q96Q04 1460 aa35.92■■■■□ 3.34
SRM-205ENST00000487300 ATP7AQ04656 1500 aa35.87■■■■□ 3.33
SRM-205ENST00000487300 CFDP1Q9UEE9 299 aaPredicted RBP35.85■■■■□ 3.33
SRM-205ENST00000487300 MLECQ14165 292 aa35.83■■■■□ 3.33
SRM-205ENST00000487300 ZNF777Q9ULD5 760 aaPredicted RBP35.83■■■■□ 3.33
SRM-205ENST00000487300 NCOA2Q15596 1464 aa35.83■■■■□ 3.33
SRM-205ENST00000487300 PLXNC1O60486 1568 aa35.82■■■■□ 3.32
SRM-205ENST00000487300 MAP3K1Q13233 1512 aa35.81■■■■□ 3.32
SRM-205ENST00000487300 MBD5Q9P267 1494 aa35.79■■■■□ 3.32
SRM-205ENST00000487300 PREX1Q8TCU6 1659 aa35.78■■■■□ 3.32
SRM-205ENST00000487300 HNRNPMP52272 730 aaKnown RBP eCLIP35.77■■■■□ 3.32
SRM-205ENST00000487300 C3P01024 1663 aa35.77■■■■□ 3.32
SRM-205ENST00000487300 ADGBQ8N7X0 1667 aa35.77■■■■□ 3.32
SRM-205ENST00000487300 LRRC9Q6ZRR7 1453 aa35.76■■■■□ 3.32
SRM-205ENST00000487300 MYT1LQ9UL68 1186 aa35.76■■■■□ 3.32
SRM-205ENST00000487300 SPAG9O60271 1321 aaKnown RBP35.74■■■■□ 3.31
SRM-205ENST00000487300 MROH2AA6NES4 1674 aa35.71■■■■□ 3.31
SRM-205ENST00000487300 CAMSAP2Q08AD1 1489 aa35.69■■■■□ 3.3
SRM-205ENST00000487300 ZNF644Q9H582 1327 aaPredicted RBP35.69■■■■□ 3.3
SRM-205ENST00000487300 SETD1BQ9UPS6 1966 aaKnown RBP35.66■■■■□ 3.3
SRM-205ENST00000487300 A2MP01023 1474 aa35.65■■■■□ 3.3
SRM-205ENST00000487300 RTEL1-TNFRSF6BF6WH68 1400 aa35.64■■■■□ 3.3
SRM-205ENST00000487300 ARHGEF5Q12774 1597 aa35.64■■■■□ 3.3
SRM-205ENST00000487300 CCDC141Q6ZP82 1450 aa35.61■■■■□ 3.29
SRM-205ENST00000487300 CNTLNQ9NXG0 1405 aa35.6■■■■□ 3.29
SRM-205ENST00000487300 PLPPR3Q6T4P5 718 aa35.57■■■■□ 3.28
SRM-205ENST00000487300 CEBPAP49715 358 aaPredicted RBP35.56■■■■□ 3.28
SRM-205ENST00000487300 CLTCQ00610 1675 aaKnown RBP35.56■■■■□ 3.28
SRM-205ENST00000487300 KANK4Q5T7N3 995 aaPredicted RBP35.51■■■■□ 3.28
SRM-205ENST00000487300 HSPA2P54652 639 aa35.5■■■■□ 3.27
SRM-205ENST00000487300 MAST1Q9Y2H9 1570 aa35.49■■■■□ 3.27
SRM-205ENST00000487300 STRCQ7RTU9 1775 aa35.47■■■■□ 3.27
SRM-205ENST00000487300 MYOM3Q5VTT5 1437 aa35.47■■■■□ 3.27
SRM-205ENST00000487300 UHRF1BP1Q6BDS2 1440 aa35.47■■■■□ 3.27
SRM-205ENST00000487300 RSPH4AQ5TD94 716 aa35.46■■■■□ 3.27
SRM-205ENST00000487300 MIA2Q96PC5 1412 aa35.46■■■■□ 3.27
SRM-205ENST00000487300 NPATQ14207 1427 aa35.42■■■■□ 3.26
SRM-205ENST00000487300 DHX29Q7Z478 1369 aaKnown RBP35.42■■■■□ 3.26
SRM-205ENST00000487300 ESF1Q9H501 851 aaKnown RBP35.42■■■■□ 3.26
SRM-205ENST00000487300 FAM135AQ9P2D6 1515 aa35.39■■■■□ 3.26
SRM-205ENST00000487300 CROCC2H7BZ55 1655 aa35.38■■■■□ 3.25
SRM-205ENST00000487300 ZNF142P52746 1687 aaPredicted RBP35.37■■■■□ 3.25
SRM-205ENST00000487300 ZMYM3Q14202 1370 aa35.37■■■■□ 3.25
SRM-205ENST00000487300 ILDR1Q86SU0 546 aaPredicted RBP35.35■■■■□ 3.25
SRM-205ENST00000487300 MYO3AQ8NEV4 1616 aa35.35■■■■□ 3.25
SRM-205ENST00000487300 PPP6R1Q9UPN7 881 aa35.33■■■■□ 3.25
SRM-205ENST00000487300 RNF17Q9BXT8 1623 aaKnown RBP35.32■■■■□ 3.24
SRM-205ENST00000487300 PTPN23Q9H3S7 1636 aa35.32■■■■□ 3.24
SRM-205ENST00000487300 EIF2AK4Q9P2K8 1649 aaKnown RBP35.32■■■■□ 3.24
SRM-205ENST00000487300 PTPRKQ15262 1439 aa35.29■■■■□ 3.24
SRM-205ENST00000487300 KDM5DQ9BY66 1539 aa35.28■■■■□ 3.24
SRM-205ENST00000487300 GGT6Q6P531 493 aa35.28■■■■□ 3.24
SRM-205ENST00000487300 SHANK2Q9UPX8 1470 aa35.24■■■■□ 3.23
SRM-205ENST00000487300 TSPY4P0CV99 314 aa35.24■■■■□ 3.23
SRM-205ENST00000487300 TSPY10P0CW01 314 aa35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms