RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
GCFC2-209ENST00000486016 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
GCFC2-209ENST00000486016 ZSWIM6Q9HCJ5 1215 aa13.12□□□□□ -0.31
GCFC2-209ENST00000486016 MICALL2Q8IY33 904 aa13.11□□□□□ -0.31
GCFC2-209ENST00000486016 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
GCFC2-209ENST00000486016 TMEM92Q6UXU6 159 aa13.1□□□□□ -0.31
GCFC2-209ENST00000486016 MYT1LQ9UL68 1186 aa13.09□□□□□ -0.31
GCFC2-209ENST00000486016 PHF8Q9UPP1 1060 aa13.09□□□□□ -0.31
GCFC2-209ENST00000486016 ZNF687Q8N1G0 1237 aa13.06□□□□□ -0.32
GCFC2-209ENST00000486016 STK24Q9Y6E0 443 aa13.06□□□□□ -0.32
GCFC2-209ENST00000486016 FBXO22Q8NEZ5 403 aa13.05□□□□□ -0.32
GCFC2-209ENST00000486016 STK25O00506 426 aa13.04□□□□□ -0.32
GCFC2-209ENST00000486016 GPR153Q6NV75 609 aa13.03□□□□□ -0.32
GCFC2-209ENST00000486016 MFRPQ9BY79 579 aa13.02□□□□□ -0.33
GCFC2-209ENST00000486016 NLRP6P59044 892 aa12.99□□□□□ -0.33
GCFC2-209ENST00000486016 PTGER2P43116 358 aa12.98□□□□□ -0.33
GCFC2-209ENST00000486016 ARSIQ5FYB1 569 aa12.97□□□□□ -0.33
GCFC2-209ENST00000486016 ANKRD13DQ6ZTN6 518 aa12.95□□□□□ -0.34
GCFC2-209ENST00000486016 KHSRPQ92945 711 aaKnown RBP eCLIP12.92□□□□□ -0.34
GCFC2-209ENST00000486016 HS6ST3Q8IZP7 471 aa12.89□□□□□ -0.35
GCFC2-209ENST00000486016 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
GCFC2-209ENST00000486016 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
GCFC2-209ENST00000486016 DNAJC5Q9H3Z4 198 aa12.83□□□□□ -0.36
GCFC2-209ENST00000486016 PPP1R37O75864 691 aa12.81□□□□□ -0.36
GCFC2-209ENST00000486016 CHGAP10645 457 aaKnown RBP12.79□□□□□ -0.36
GCFC2-209ENST00000486016 KIF3CO14782 793 aa12.78□□□□□ -0.36
GCFC2-209ENST00000486016 PBX2P40425 430 aa12.77□□□□□ -0.37
GCFC2-209ENST00000486016 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
GCFC2-209ENST00000486016 NUDT7P0C024 238 aa12.76□□□□□ -0.37
GCFC2-209ENST00000486016 AXIN2Q9Y2T1 843 aa12.73□□□□□ -0.37
GCFC2-209ENST00000486016 C2orf72A6NCS6 295 aa12.72□□□□□ -0.37
GCFC2-209ENST00000486016 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
GCFC2-209ENST00000486016 POTEEQ6S8J3 1075 aa12.7□□□□□ -0.38
GCFC2-209ENST00000486016 SLC34A2O95436 690 aa12.69□□□□□ -0.38
GCFC2-209ENST00000486016 PLA2G2EQ9NZK7 142 aa12.67□□□□□ -0.38
GCFC2-209ENST00000486016 PCDHGA4Q9Y5G9 962 aa12.67□□□□□ -0.38
GCFC2-209ENST00000486016 HCSTQ9UBK5 93 aa12.63□□□□□ -0.39
GCFC2-209ENST00000486016 TMC2Q8TDI7 906 aa12.62□□□□□ -0.39
GCFC2-209ENST00000486016 PSDA5PKW4 1024 aaPredicted RBP12.58□□□□□ -0.4
GCFC2-209ENST00000486016 GTPBP6O43824 516 aaPredicted RBP12.58□□□□□ -0.4
GCFC2-209ENST00000486016 ADGRD1Q6QNK2 874 aa12.58□□□□□ -0.4
GCFC2-209ENST00000486016 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
GCFC2-209ENST00000486016 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
GCFC2-209ENST00000486016 GPHNQ9NQX3 736 aaPredicted RBP12.55□□□□□ -0.4
GCFC2-209ENST00000486016 FOXK1P85037 733 aa12.54□□□□□ -0.4
GCFC2-209ENST00000486016 TK2O00142 265 aa12.51□□□□□ -0.41
GCFC2-209ENST00000486016 KDM4FA0A1W2PPD8 638 aa12.49□□□□□ -0.41
GCFC2-209ENST00000486016 PSEN2P49810 448 aa12.49□□□□□ -0.41
GCFC2-209ENST00000486016 DSG2Q14126 1118 aa12.49□□□□□ -0.41
GCFC2-209ENST00000486016 DMRTA1Q5VZB9 504 aa12.49□□□□□ -0.41
GCFC2-209ENST00000486016 DCAF8L2P0C7V8 631 aa12.48□□□□□ -0.41
GCFC2-209ENST00000486016 PLPP6Q8IY26 295 aa12.48□□□□□ -0.41
GCFC2-209ENST00000486016 PTCD2Q8WV60 388 aaKnown RBP12.48□□□□□ -0.41
GCFC2-209ENST00000486016 CRISPLD2Q9H0B8 497 aa12.48□□□□□ -0.41
GCFC2-209ENST00000486016 HRO43593 1189 aa12.46□□□□□ -0.41
GCFC2-209ENST00000486016 KCTD12Q96CX2 325 aaKnown RBP12.45□□□□□ -0.42
GCFC2-209ENST00000486016 NCKAP5LQ9HCH0 1330 aa12.44□□□□□ -0.42
GCFC2-209ENST00000486016 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
GCFC2-209ENST00000486016 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
GCFC2-209ENST00000486016 STAC3Q96MF2 364 aa12.42□□□□□ -0.42
GCFC2-209ENST00000486016 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
GCFC2-209ENST00000486016 TBC1D12O60347 775 aa12.36□□□□□ -0.43
GCFC2-209ENST00000486016 PDE4AP27815 886 aa12.35□□□□□ -0.43
GCFC2-209ENST00000486016 OXER1Q8TDS5 423 aa12.35□□□□□ -0.43
GCFC2-209ENST00000486016 PPP1R15BQ5SWA1 713 aa12.34□□□□□ -0.43
GCFC2-209ENST00000486016 BBXQ8WY36 941 aaPredicted RBP12.34□□□□□ -0.43
GCFC2-209ENST00000486016 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
GCFC2-209ENST00000486016 KCNK17Q96T54 332 aa12.34□□□□□ -0.43
GCFC2-209ENST00000486016 PTPN5P54829 565 aa12.33□□□□□ -0.44
GCFC2-209ENST00000486016 CADPS2Q86UW7 1296 aa12.33□□□□□ -0.44
GCFC2-209ENST00000486016 MFSD10Q14728 455 aa12.32□□□□□ -0.44
GCFC2-209ENST00000486016 LARP6Q9BRS8 491 aaKnown RBP12.29□□□□□ -0.44
GCFC2-209ENST00000486016 VPS9D1Q9Y2B5 631 aa12.27□□□□□ -0.45
GCFC2-209ENST00000486016 RGS20O76081 388 aa12.25□□□□□ -0.45
GCFC2-209ENST00000486016 UPF1Q92900 1129 aaKnown RBP eCLIP12.25□□□□□ -0.45
GCFC2-209ENST00000486016 DDX27Q96GQ7 796 aaKnown RBP12.25□□□□□ -0.45
GCFC2-209ENST00000486016 IFFO2Q5TF58 517 aa12.24□□□□□ -0.45
GCFC2-209ENST00000486016 SLC4A5Q9BY07 1137 aa12.24□□□□□ -0.45
GCFC2-209ENST00000486016 ZNF454Q8N9F8 522 aa12.21□□□□□ -0.45
GCFC2-209ENST00000486016 ANO8Q9HCE9 1232 aaPredicted RBP12.21□□□□□ -0.45
GCFC2-209ENST00000486016 EMILIN3Q9NT22 766 aa12.21□□□□□ -0.45
GCFC2-209ENST00000486016 BCL2L12Q9HB09 334 aa12.2□□□□□ -0.46
GCFC2-209ENST00000486016 IRX2Q9BZI1 471 aaPredicted RBP12.19□□□□□ -0.46
GCFC2-209ENST00000486016 THSD4Q6ZMP0 1018 aa12.17□□□□□ -0.46
GCFC2-209ENST00000486016 SPRYD3Q8NCJ5 442 aa12.17□□□□□ -0.46
GCFC2-209ENST00000486016 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
GCFC2-209ENST00000486016 BHMG1C9JSJ3 638 aaPredicted RBP12.16□□□□□ -0.46
GCFC2-209ENST00000486016 CAMK2BQ13554 666 aa12.16□□□□□ -0.46
GCFC2-209ENST00000486016 EVI5O60447 810 aa12.14□□□□□ -0.47
GCFC2-209ENST00000486016 PTPREP23469 700 aa12.14□□□□□ -0.47
GCFC2-209ENST00000486016 FOSBP53539 338 aa12.14□□□□□ -0.47
GCFC2-209ENST00000486016 WNT2BQ93097 391 aa12.14□□□□□ -0.47
GCFC2-209ENST00000486016 A0A0G2JS52 829 aa12.13□□□□□ -0.47
GCFC2-209ENST00000486016 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.13□□□□□ -0.47
GCFC2-209ENST00000486016 MRPL50Q8N5N7 158 aaKnown RBP12.12□□□□□ -0.47
GCFC2-209ENST00000486016 ZBED2Q9BTP6 218 aa12.12□□□□□ -0.47
GCFC2-209ENST00000486016 MAP3K9P80192 1104 aa12.09□□□□□ -0.47
GCFC2-209ENST00000486016 JPH4Q96JJ6 628 aa12.09□□□□□ -0.47
GCFC2-209ENST00000486016 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
GCFC2-209ENST00000486016 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms