RNA–Protein interactions for RNA: ENST00000484987.1

COL21A1-210, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 5

Gene COL21A1, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-210ENST00000484987 G3V3G9 751 aa12.1□□□□□ -0.47
COL21A1-210ENST00000484987 PDAP1Q13442 181 aaKnown RBP12.1□□□□□ -0.47
COL21A1-210ENST00000484987 VSIG10Q8N0Z9 540 aa12.1□□□□□ -0.47
COL21A1-210ENST00000484987 CABP2Q9NPB3 220 aa12.1□□□□□ -0.47
COL21A1-210ENST00000484987 CIZ1Q9ULV3 898 aaPredicted RBP12.09□□□□□ -0.47
COL21A1-210ENST00000484987 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
COL21A1-210ENST00000484987 ANKRD13DQ6ZTN6 518 aa12.05□□□□□ -0.48
COL21A1-210ENST00000484987 PAXIP1Q6ZW49 1069 aaPredicted RBP12□□□□□ -0.49
COL21A1-210ENST00000484987 SPRYD3Q8NCJ5 442 aa11.97□□□□□ -0.49
COL21A1-210ENST00000484987 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
COL21A1-210ENST00000484987 CHGAP10645 457 aaKnown RBP11.95□□□□□ -0.5
COL21A1-210ENST00000484987 CFAP44Q96MT7 982 aa11.95□□□□□ -0.5
COL21A1-210ENST00000484987 HCSTQ9UBK5 93 aa11.95□□□□□ -0.5
COL21A1-210ENST00000484987 BCANQ96GW7 911 aa11.94□□□□□ -0.5
COL21A1-210ENST00000484987 LSM11P83369 360 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL21A1-210ENST00000484987 HS6ST3Q8IZP7 471 aa11.92□□□□□ -0.5
COL21A1-210ENST00000484987 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
COL21A1-210ENST00000484987 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
COL21A1-210ENST00000484987 GPR153Q6NV75 609 aa11.9□□□□□ -0.5
COL21A1-210ENST00000484987 TMEM92Q6UXU6 159 aa11.89□□□□□ -0.51
COL21A1-210ENST00000484987 EFCAB3Q8N7B9 438 aa11.89□□□□□ -0.51
COL21A1-210ENST00000484987 RNF25Q96BH1 459 aaPredicted RBP11.87□□□□□ -0.51
COL21A1-210ENST00000484987 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
COL21A1-210ENST00000484987 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
COL21A1-210ENST00000484987 RIOK3O14730 519 aaKnown RBP11.84□□□□□ -0.51
COL21A1-210ENST00000484987 IRX2Q9BZI1 471 aaPredicted RBP11.84□□□□□ -0.51
COL21A1-210ENST00000484987 TSHZ2Q9NRE2 1034 aa11.8□□□□□ -0.52
COL21A1-210ENST00000484987 VGFO15240 615 aaPredicted RBP11.77□□□□□ -0.53
COL21A1-210ENST00000484987 RGS20O76081 388 aa11.77□□□□□ -0.53
COL21A1-210ENST00000484987 ARSIQ5FYB1 569 aa11.77□□□□□ -0.53
COL21A1-210ENST00000484987 ZNF316A6NFI3 1004 aaPredicted RBP11.76□□□□□ -0.53
COL21A1-210ENST00000484987 MS4A4AQ96JQ5 239 aa11.74□□□□□ -0.53
COL21A1-210ENST00000484987 KHSRPQ92945 711 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL21A1-210ENST00000484987 PBX2P40425 430 aa11.72□□□□□ -0.53
COL21A1-210ENST00000484987 NKX1-1Q15270 411 aaPredicted RBP11.7□□□□□ -0.54
COL21A1-210ENST00000484987 STK25O00506 426 aa11.69□□□□□ -0.54
COL21A1-210ENST00000484987 SOX12O15370 315 aa11.69□□□□□ -0.54
COL21A1-210ENST00000484987 PHF8Q9UPP1 1060 aa11.68□□□□□ -0.54
COL21A1-210ENST00000484987 GTPBP6O43824 516 aaPredicted RBP11.66□□□□□ -0.54
COL21A1-210ENST00000484987 RYDENQ9NUL5 291 aaKnown RBP11.65□□□□□ -0.54
COL21A1-210ENST00000484987 POTEEQ6S8J3 1075 aa11.64□□□□□ -0.55
COL21A1-210ENST00000484987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
COL21A1-210ENST00000484987 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
COL21A1-210ENST00000484987 AXIN2Q9Y2T1 843 aa11.62□□□□□ -0.55
COL21A1-210ENST00000484987 BCL11BQ9C0K0 894 aaPredicted RBP11.61□□□□□ -0.55
COL21A1-210ENST00000484987 ADGRD1Q6QNK2 874 aa11.59□□□□□ -0.55
COL21A1-210ENST00000484987 STK24Q9Y6E0 443 aa11.59□□□□□ -0.55
COL21A1-210ENST00000484987 NUDT7P0C024 238 aa11.57□□□□□ -0.56
COL21A1-210ENST00000484987 PRKCSHP14314 528 aaPredicted RBP11.55□□□□□ -0.56
COL21A1-210ENST00000484987 IFFO2Q5TF58 517 aa11.55□□□□□ -0.56
COL21A1-210ENST00000484987 LHX6Q9UPM6 363 aa11.53□□□□□ -0.56
COL21A1-210ENST00000484987 Q6ZNB5 142 aa11.52□□□□□ -0.57
COL21A1-210ENST00000484987 NLRP6P59044 892 aa11.51□□□□□ -0.57
COL21A1-210ENST00000484987 NBR1Q14596 966 aa11.51□□□□□ -0.57
COL21A1-210ENST00000484987 A0A0G2JS52 829 aa11.5□□□□□ -0.57
COL21A1-210ENST00000484987 C2orf72A6NCS6 295 aa11.5□□□□□ -0.57
COL21A1-210ENST00000484987 KIF3CO14782 793 aa11.5□□□□□ -0.57
COL21A1-210ENST00000484987 TPRNQ4KMQ1 711 aa11.5□□□□□ -0.57
COL21A1-210ENST00000484987 FBXO22Q8NEZ5 403 aa11.5□□□□□ -0.57
COL21A1-210ENST00000484987 KCTD12Q96CX2 325 aaKnown RBP11.49□□□□□ -0.57
COL21A1-210ENST00000484987 HRO43593 1189 aa11.47□□□□□ -0.57
COL21A1-210ENST00000484987 PCDHGA4Q9Y5G9 962 aa11.47□□□□□ -0.57
COL21A1-210ENST00000484987 TK2O00142 265 aa11.44□□□□□ -0.58
COL21A1-210ENST00000484987 ARHGAP33O14559 1287 aa11.44□□□□□ -0.58
COL21A1-210ENST00000484987 SLC34A2O95436 690 aa11.41□□□□□ -0.58
COL21A1-210ENST00000484987 MFRPQ9BY79 579 aa11.41□□□□□ -0.58
COL21A1-210ENST00000484987 PTPN5P54829 565 aa11.35□□□□□ -0.59
COL21A1-210ENST00000484987 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
COL21A1-210ENST00000484987 P3H3Q8IVL6 736 aa11.35□□□□□ -0.59
COL21A1-210ENST00000484987 TMC2Q8TDI7 906 aa11.34□□□□□ -0.59
COL21A1-210ENST00000484987 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
COL21A1-210ENST00000484987 PSEN2P49810 448 aa11.33□□□□□ -0.6
COL21A1-210ENST00000484987 STAC3Q96MF2 364 aa11.32□□□□□ -0.6
COL21A1-210ENST00000484987 KDM4FA0A1W2PPD8 638 aa11.29□□□□□ -0.6
COL21A1-210ENST00000484987 LCE2BO14633 110 aa11.28□□□□□ -0.6
COL21A1-210ENST00000484987 WDR70Q9NW82 654 aa11.28□□□□□ -0.6
COL21A1-210ENST00000484987 CADPS2Q86UW7 1296 aa11.27□□□□□ -0.61
COL21A1-210ENST00000484987 TRAF7Q6Q0C0 670 aa11.22□□□□□ -0.61
COL21A1-210ENST00000484987 PTCD2Q8WV60 388 aaKnown RBP11.22□□□□□ -0.61
COL21A1-210ENST00000484987 PPP4R3BQ5MIZ7 849 aa11.21□□□□□ -0.61
COL21A1-210ENST00000484987 LAPTM4AQ15012 233 aa11.2□□□□□ -0.62
COL21A1-210ENST00000484987 PPP1R37O75864 691 aa11.19□□□□□ -0.62
COL21A1-210ENST00000484987 KCNV2Q8TDN2 545 aa11.19□□□□□ -0.62
COL21A1-210ENST00000484987 THSD4Q6ZMP0 1018 aa11.18□□□□□ -0.62
COL21A1-210ENST00000484987 KCNK17Q96T54 332 aa11.18□□□□□ -0.62
COL21A1-210ENST00000484987 PLPP6Q8IY26 295 aa11.14□□□□□ -0.63
COL21A1-210ENST00000484987 VPS9D1Q9Y2B5 631 aa11.14□□□□□ -0.63
COL21A1-210ENST00000484987 ARHGEF1Q92888 912 aaKnown RBP11.13□□□□□ -0.63
COL21A1-210ENST00000484987 FOXK1P85037 733 aa11.12□□□□□ -0.63
COL21A1-210ENST00000484987 KCNH8Q96L42 1107 aa11.12□□□□□ -0.63
COL21A1-210ENST00000484987 E2F4Q16254 413 aa11.1□□□□□ -0.63
COL21A1-210ENST00000484987 TBC1D12O60347 775 aa11.08□□□□□ -0.64
COL21A1-210ENST00000484987 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.08□□□□□ -0.64
COL21A1-210ENST00000484987 DSG2Q14126 1118 aa11.07□□□□□ -0.64
COL21A1-210ENST00000484987 TULP1O00294 542 aaPredicted RBP11.06□□□□□ -0.64
COL21A1-210ENST00000484987 PDE4AP27815 886 aa11.06□□□□□ -0.64
COL21A1-210ENST00000484987 GPHNQ9NQX3 736 aaPredicted RBP11.06□□□□□ -0.64
COL21A1-210ENST00000484987 GFRA3O60609 400 aa11.05□□□□□ -0.64
COL21A1-210ENST00000484987 ITGBL1O95965 494 aaPredicted RBP11.05□□□□□ -0.64
COL21A1-210ENST00000484987 LMOD2Q6P5Q4 547 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms