RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.24□□□□□ -1.09
ERCC8-206ENST00000484330 DOK7Q18PE1 504 aa8.24□□□□□ -1.09
ERCC8-206ENST00000484330 ZFP91Q96JP5 570 aaPredicted RBP8.24□□□□□ -1.09
ERCC8-206ENST00000484330 PTGER2P43116 358 aa8.23□□□□□ -1.09
ERCC8-206ENST00000484330 BBXQ8WY36 941 aaPredicted RBP8.23□□□□□ -1.09
ERCC8-206ENST00000484330 G3V3G9 751 aa8.22□□□□□ -1.09
ERCC8-206ENST00000484330 STK24Q9Y6E0 443 aa8.22□□□□□ -1.09
ERCC8-206ENST00000484330 BCL11BQ9C0K0 894 aaPredicted RBP8.21□□□□□ -1.1
ERCC8-206ENST00000484330 VARS2Q5ST30 1063 aaKnown RBP8.2□□□□□ -1.1
ERCC8-206ENST00000484330 ZNF687Q8N1G0 1237 aa8.2□□□□□ -1.1
ERCC8-206ENST00000484330 DNAJC5Q9H3Z4 198 aa8.19□□□□□ -1.1
ERCC8-206ENST00000484330 RYDENQ9NUL5 291 aaKnown RBP8.18□□□□□ -1.1
ERCC8-206ENST00000484330 RIMBP2O15034 1052 aa8.17□□□□□ -1.1
ERCC8-206ENST00000484330 CABP2Q9NPB3 220 aa8.17□□□□□ -1.1
ERCC8-206ENST00000484330 ZSWIM6Q9HCJ5 1215 aa8.15□□□□□ -1.1
ERCC8-206ENST00000484330 GPR153Q6NV75 609 aa8.13□□□□□ -1.11
ERCC8-206ENST00000484330 SPRYD3Q8NCJ5 442 aa8.13□□□□□ -1.11
ERCC8-206ENST00000484330 SOX12O15370 315 aa8.12□□□□□ -1.11
ERCC8-206ENST00000484330 PLCB2Q00722 1185 aa8.11□□□□□ -1.11
ERCC8-206ENST00000484330 TMEM92Q6UXU6 159 aa8.09□□□□□ -1.11
ERCC8-206ENST00000484330 PAXIP1Q6ZW49 1069 aaPredicted RBP8.09□□□□□ -1.11
ERCC8-206ENST00000484330 NLRP6P59044 892 aa8.08□□□□□ -1.12
ERCC8-206ENST00000484330 ANKRD13DQ6ZTN6 518 aa8.08□□□□□ -1.12
ERCC8-206ENST00000484330 EFCAB3Q8N7B9 438 aa8.08□□□□□ -1.12
ERCC8-206ENST00000484330 CFAP44Q96MT7 982 aa8.08□□□□□ -1.12
ERCC8-206ENST00000484330 NKX1-1Q15270 411 aaPredicted RBP8.05□□□□□ -1.12
ERCC8-206ENST00000484330 MICALL2Q8IY33 904 aa8.04□□□□□ -1.12
ERCC8-206ENST00000484330 GTPBP6O43824 516 aaPredicted RBP8.03□□□□□ -1.12
ERCC8-206ENST00000484330 ARSIQ5FYB1 569 aa8.03□□□□□ -1.12
ERCC8-206ENST00000484330 MFRPQ9BY79 579 aa8.02□□□□□ -1.13
ERCC8-206ENST00000484330 LSM11P83369 360 aaKnown RBP eCLIP8.01□□□□□ -1.13
ERCC8-206ENST00000484330 PLA2G2EQ9NZK7 142 aa8.01□□□□□ -1.13
ERCC8-206ENST00000484330 PHF8Q9UPP1 1060 aa8.01□□□□□ -1.13
ERCC8-206ENST00000484330 ZNF316A6NFI3 1004 aaPredicted RBP8□□□□□ -1.13
ERCC8-206ENST00000484330 SLC24A1O60721 1099 aa8□□□□□ -1.13
ERCC8-206ENST00000484330 HAP1P54257 671 aaPredicted RBP7.99□□□□□ -1.13
ERCC8-206ENST00000484330 FBXO22Q8NEZ5 403 aa7.99□□□□□ -1.13
ERCC8-206ENST00000484330 KHSRPQ92945 711 aaKnown RBP eCLIP7.96□□□□□ -1.14
ERCC8-206ENST00000484330 HCSTQ9UBK5 93 aa7.96□□□□□ -1.14
ERCC8-206ENST00000484330 PBX2P40425 430 aa7.94□□□□□ -1.14
ERCC8-206ENST00000484330 MS4A4AQ96JQ5 239 aa7.94□□□□□ -1.14
ERCC8-206ENST00000484330 RGS20O76081 388 aa7.93□□□□□ -1.14
ERCC8-206ENST00000484330 POTEEQ6S8J3 1075 aa7.91□□□□□ -1.14
ERCC8-206ENST00000484330 VSIG10Q8N0Z9 540 aa7.9□□□□□ -1.14
ERCC8-206ENST00000484330 TSHZ2Q9NRE2 1034 aa7.89□□□□□ -1.15
ERCC8-206ENST00000484330 PPP1R37O75864 691 aa7.88□□□□□ -1.15
ERCC8-206ENST00000484330 IRX2Q9BZI1 471 aaPredicted RBP7.88□□□□□ -1.15
ERCC8-206ENST00000484330 AXIN2Q9Y2T1 843 aa7.88□□□□□ -1.15
ERCC8-206ENST00000484330 LHX6Q9UPM6 363 aa7.86□□□□□ -1.15
ERCC8-206ENST00000484330 NUDT7P0C024 238 aa7.85□□□□□ -1.15
ERCC8-206ENST00000484330 PDE4AP27815 886 aa7.83□□□□□ -1.16
ERCC8-206ENST00000484330 ADGRD1Q6QNK2 874 aa7.83□□□□□ -1.16
ERCC8-206ENST00000484330 WDR70Q9NW82 654 aa7.83□□□□□ -1.16
ERCC8-206ENST00000484330 ARHGAP33O14559 1287 aa7.82□□□□□ -1.16
ERCC8-206ENST00000484330 KIF3CO14782 793 aa7.82□□□□□ -1.16
ERCC8-206ENST00000484330 SLC34A2O95436 690 aa7.81□□□□□ -1.16
ERCC8-206ENST00000484330 TMC2Q8TDI7 906 aa7.8□□□□□ -1.16
ERCC8-206ENST00000484330 PCDHGA4Q9Y5G9 962 aa7.8□□□□□ -1.16
ERCC8-206ENST00000484330 TK2O00142 265 aa7.79□□□□□ -1.16
ERCC8-206ENST00000484330 C2orf72A6NCS6 295 aa7.78□□□□□ -1.16
ERCC8-206ENST00000484330 HRO43593 1189 aa7.78□□□□□ -1.16
ERCC8-206ENST00000484330 CADPS2Q86UW7 1296 aa7.77□□□□□ -1.17
ERCC8-206ENST00000484330 LARP6Q9BRS8 491 aaKnown RBP7.76□□□□□ -1.17
ERCC8-206ENST00000484330 CRISPLD2Q9H0B8 497 aa7.76□□□□□ -1.17
ERCC8-206ENST00000484330 GPHNQ9NQX3 736 aaPredicted RBP7.76□□□□□ -1.17
ERCC8-206ENST00000484330 KDM2AQ9Y2K7 1162 aa7.76□□□□□ -1.17
ERCC8-206ENST00000484330 PSDA5PKW4 1024 aaPredicted RBP7.75□□□□□ -1.17
ERCC8-206ENST00000484330 DDX27Q96GQ7 796 aaKnown RBP7.75□□□□□ -1.17
ERCC8-206ENST00000484330 P3H3Q8IVL6 736 aa7.74□□□□□ -1.17
ERCC8-206ENST00000484330 MFSD10Q14728 455 aa7.73□□□□□ -1.17
ERCC8-206ENST00000484330 DMRTA1Q5VZB9 504 aa7.73□□□□□ -1.17
ERCC8-206ENST00000484330 NCKAP5LQ9HCH0 1330 aa7.73□□□□□ -1.17
ERCC8-206ENST00000484330 KDM4FA0A1W2PPD8 638 aa7.72□□□□□ -1.17
ERCC8-206ENST00000484330 IFFO2Q5TF58 517 aa7.72□□□□□ -1.17
ERCC8-206ENST00000484330 KCTD12Q96CX2 325 aaKnown RBP7.72□□□□□ -1.17
ERCC8-206ENST00000484330 PSEN2P49810 448 aa7.7□□□□□ -1.18
ERCC8-206ENST00000484330 FOXK1P85037 733 aa7.7□□□□□ -1.18
ERCC8-206ENST00000484330 E2F4Q16254 413 aa7.7□□□□□ -1.18
ERCC8-206ENST00000484330 PPP1R15BQ5SWA1 713 aa7.7□□□□□ -1.18
ERCC8-206ENST00000484330 STAC3Q96MF2 364 aa7.68□□□□□ -1.18
ERCC8-206ENST00000484330 DSG2Q14126 1118 aa7.67□□□□□ -1.18
ERCC8-206ENST00000484330 PLPP6Q8IY26 295 aa7.67□□□□□ -1.18
ERCC8-206ENST00000484330 PTCD2Q8WV60 388 aaKnown RBP7.65□□□□□ -1.18
ERCC8-206ENST00000484330 PTPN5P54829 565 aa7.64□□□□□ -1.19
ERCC8-206ENST00000484330 CAMK2BQ13554 666 aa7.64□□□□□ -1.19
ERCC8-206ENST00000484330 ARHGEF1Q92888 912 aaKnown RBP7.64□□□□□ -1.19
ERCC8-206ENST00000484330 TBC1D12O60347 775 aa7.63□□□□□ -1.19
ERCC8-206ENST00000484330 A0A0G2JS52 829 aa7.62□□□□□ -1.19
ERCC8-206ENST00000484330 NBR1Q14596 966 aa7.62□□□□□ -1.19
ERCC8-206ENST00000484330 PPP4R3BQ5MIZ7 849 aa7.62□□□□□ -1.19
ERCC8-206ENST00000484330 Q6ZNB5 142 aa7.62□□□□□ -1.19
ERCC8-206ENST00000484330 BCANQ96GW7 911 aa7.62□□□□□ -1.19
ERCC8-206ENST00000484330 KCNV2Q8TDN2 545 aa7.61□□□□□ -1.19
ERCC8-206ENST00000484330 VPS9D1Q9Y2B5 631 aa7.61□□□□□ -1.19
ERCC8-206ENST00000484330 ARIH1Q9Y4X5 557 aaPredicted RBP7.61□□□□□ -1.19
ERCC8-206ENST00000484330 MAP3K9P80192 1104 aa7.59□□□□□ -1.19
ERCC8-206ENST00000484330 SPDYE16A6NNV3 312 aaPredicted RBP7.57□□□□□ -1.2
ERCC8-206ENST00000484330 THSD4Q6ZMP0 1018 aa7.57□□□□□ -1.2
ERCC8-206ENST00000484330 SLC4A5Q9BY07 1137 aa7.57□□□□□ -1.2
ERCC8-206ENST00000484330 BHMG1C9JSJ3 638 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms